Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0132800-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:1813011:1817601:-1 gene:Os01g0132800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-tRNA hydrolase family protein. (Os01t0132800-01)
Sequence

ATGTCGCTTGCCGTGGCCACTCCCGCCTCCGCCCGCCTCTCCCCGCTCACCACCTCCTCC
CCCGAACCCTGCCGCCGCCGCCGCCTCCTCCTCTCCGCAGCCGCCCCTCTCCGGCGCACC
CGTCTCCGGCGCCGCATCGCCGTCGTCGCGTCCGTCCCCGACCCCGCGGCGCGGCCGGCG
GAGTACACGCCCTGGCTCATCGCCGGCCTCGGCAACCCCGGCAGCAAGTACCACGGCACG
CGTCACAACGTGGGGTTTGAGATGGTCGATCGCATCGCGCGAGACGAGGGGATCACCATG
AACACGATCCAGTCCAAGTCGCTGCTCGGAATAGGTTCGATTGGGGAAGTGCCTGTCTTG
TTGGTAAAGCCACAATCATATATCAACTACAGTGGGGAGGCAATTGGACCTCTTGCTGCC
TATTATCAAGTACCATTGCGGCATATCCTTGTGATGTATGATGAGATGAGTCTACCCAAT
GGTGTATTGCGTCTTCAACGGAAAGGTGGTCATGGTCGCCATAATGGCCTGCAGAACGTA
ATGGAATGTTTGGACAGTTCCCGTGAACTTCCTCGTTTATCTATAGGCATTGGTAGCCCA
CCCGGCAAAATGGACACGCGTGCTTTTCTTCTGCAGAAGTTCAGTTCAGAGGAACGGCTG
CAGATTGACACTGCTTTGGAGCAAGGGGTGGATGCTGTGAGAACTCTTGTGTTGAAGGGT
TTTAGTGGAAGTATTGAGAGATTCAATCTGGTTCAGAAGTACAAGTTCCACAGTGTTTGA

Peptide Sequence

PEP ID

Os01t0132800-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:1813011:1817601:-1 gene:Os01g0132800 transcript:Os01t0132800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-tRNA hydrolase family protein. (Os01t0132800-01)
Sequence

MSLAVATPASARLSPLTTSSPEPCRRRRLLLSAAAPLRRTRLRRRIAVVASVPDPAARPA
EYTPWLIAGLGNPGSKYHGTRHNVGFEMVDRIARDEGITMNTIQSKSLLGIGSIGEVPVL
LVKPQSYINYSGEAIGPLAAYYQVPLRHILVMYDEMSLPNGVLRLQRKGGHGRHNGLQNV
MECLDSSRELPRLSIGIGSPPGKMDTRAFLLQKFSSEERLQIDTALEQGVDAVRTLVLKG
FSGSIERFNLVQKYKFHSV

Transcript Sequence

Transcript ID

Os01t0132800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:1813011:1817601:-1 gene:Os01g0132800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-tRNA hydrolase family protein. (Os01t0132800-01)
Sequence

GAAATCTCCTCTCGCCCTATCGGTTCCGCTTCTCCTCTCCCCTCGCCATGTCGCTTGCCG
TGGCCACTCCCGCCTCCGCCCGCCTCTCCCCGCTCACCACCTCCTCCCCCGAACCCTGCC
GCCGCCGCCGCCTCCTCCTCTCCGCAGCCGCCCCTCTCCGGCGCACCCGTCTCCGGCGCC
GCATCGCCGTCGTCGCGTCCGTCCCCGACCCCGCGGCGCGGCCGGCGGAGTACACGCCCT
GGCTCATCGCCGGCCTCGGCAACCCCGGCAGCAAGTACCACGGCACGCGTCACAACGTGG
GGTTTGAGATGGTCGATCGCATCGCGCGAGACGAGGGGATCACCATGAACACGATCCAGT
CCAAGTCGCTGCTCGGAATAGGTTCGATTGGGGAAGTGCCTGTCTTGTTGGTAAAGCCAC
AATCATATATCAACTACAGTGGGGAGGCAATTGGACCTCTTGCTGCCTATTATCAAGTAC
CATTGCGGCATATCCTTGTGATGTATGATGAGATGAGTCTACCCAATGGTGTATTGCGTC
TTCAACGGAAAGGTGGTCATGGTCGCCATAATGGCCTGCAGAACGTAATGGAATGTTTGG
ACAGTTCCCGTGAACTTCCTCGTTTATCTATAGGCATTGGTAGCCCACCCGGCAAAATGG
ACACGCGTGCTTTTCTTCTGCAGAAGTTCAGTTCAGAGGAACGGCTGCAGATTGACACTG
CTTTGGAGCAAGGGGTGGATGCTGTGAGAACTCTTGTGTTGAAGGGTTTTAGTGGAAGTA
TTGAGAGATTCAATCTGGTTCAGAAGTACAAGTTCCACAGTGTTTGAGAATTATTAAGAG
GCTTGGATATACTTGCTGAGGACGCATAAATACGCATCATCAATATCATTGGAAGTGTCG
GACGTGGTACTTTGCACAATCTACGTAAGTGCACTAAGTTGCTTCTGCAGTATCCTATAA
TTTTGAGGATGCTAAGAAACTTGCAGGGTGTATATAGGTAGAGTACTTTTGCATTCTTTC
CTTAGAGCAATTTTCATTAGAGAGGTAGTTGTGACCTCTAATTTTGTTCATATGTAAGCT
ACTTATTAAGTATAAGAGGTAGCATATACAATACACCACCTCTACACTAGCTTTATTACA
CTAACCCCAATAATCT