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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0132700-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:1787870:1791456:-1 gene:Os01g0132700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator 22_1 description:Surfeit locus 5 family protein. (Os01t0132700-01)
Sequence

ATGAGCAAGAGCGCCGGCGCGGCGGCGGGGCCGACGGCGGCGGCCGCGGCAGCCGCGGTG
CAGAAGCAGAAGACGCTCCTCCAGAAGGCCGACGCCGACGTCTCCAGCCTCGTCGACAAC
TTCGCCGCCTTCATCAACATCGCGCGCGTCAACGACCCGCCCGTGCGCAACACGCAGGAG
GCCTTCCAGATGGACATGCGCGGCTCCCGCTTGATACATTCAGCTGATTCTCTGTTGAAA
CTAGTGTCAGAGCTTAAGAGAACAGCTATCTTTTCTGGGCTTGCTTCGTTAACTGAAAAT
GTGGATAGGCGGATTGAGATCCTTAGTCAACAAGCTGAAGGAACAGAGAGAATGCTGGAG
AGGATTGGGCAGGAGGCAGCAGGAAGCCTAAAGGAGTTGGAGGCACATTACTACTCATCT
GTTGTGCGGACACCACCGGATGAATGA

Peptide Sequence

PEP ID

Os01t0132700-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:1787870:1791456:-1 gene:Os01g0132700 transcript:Os01t0132700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator 22_1 description:Surfeit locus 5 family protein. (Os01t0132700-01)
Sequence

MSKSAGAAAGPTAAAAAAAVQKQKTLLQKADADVSSLVDNFAAFINIARVNDPPVRNTQE
AFQMDMRGSRLIHSADSLLKLVSELKRTAIFSGLASLTENVDRRIEILSQQAEGTERMLE
RIGQEAAGSLKELEAHYYSSVVRTPPDE

Transcript Sequence

Transcript ID

Os01t0132700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:1787870:1791456:-1 gene:Os01g0132700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator 22_1 description:Surfeit locus 5 family protein. (Os01t0132700-01)
Sequence

ATCGCAGCAGCAGCAGCAACGATGAGCAAGAGCGCCGGCGCGGCGGCGGGGCCGACGGCG
GCGGCCGCGGCAGCCGCGGTGCAGAAGCAGAAGACGCTCCTCCAGAAGGCCGACGCCGAC
GTCTCCAGCCTCGTCGACAACTTCGCCGCCTTCATCAACATCGCGCGCGTCAACGACCCG
CCCGTGCGCAACACGCAGGAGGCCTTCCAGATGGACATGCGCGGCTCCCGCTTGATACAT
TCAGCTGATTCTCTGTTGAAACTAGTGTCAGAGCTTAAGAGAACAGCTATCTTTTCTGGG
CTTGCTTCGTTAACTGAAAATGTGGATAGGCGGATTGAGATCCTTAGTCAACAAGCTGAA
GGAACAGAGAGAATGCTGGAGAGGATTGGGCAGGAGGCAGCAGGAAGCCTAAAGGAGTTG
GAGGCACATTACTACTCATCTGTTGTGCGGACACCACCGGATGAATGAGGATTATCCCTT
CTGAATAGGCGTGGACTTTAAAGCAGTAGTGACAATGACTTGTTCAGTATGTCTTATGTA
AAATCACATTTAATTTAATCAAGAACTGATTTGATCTTTTAGCCCCAACTTTACTGTATA
AGTTGTTGGGAACTTGGGATGCCTTTCTGGTTTCTACCTTTTTAGGCGTTCTAGTTTCCA
CCCAAACGAAGCTGTTTGCTCTCGTACGGCTGTGTAATTTATCTCTACGTGCTAAATTGA
TTACCTTGCATTGGAGGAACAATATTGACGCTTAACATGTGTTACAGCGGACTTGTTCAA
ACT