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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0132000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:1760310:1761065:-1 gene:Os01g0132000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:incompatible strain of P. avenae-induced gene 2 description:Similar to Wound-induced protease inhibitor (WIP1). (Os01t0132000-01)
Sequence

ATGAAGAGCAGCACTCTCTTGGTGATCCTGGCTGTCCAGGCCGCTCTTATCATGGGAATC
TTTGCTGCTGTTGCAAAAGAAAATGCCGTGGGTGAGAGCAAGGCGATCGACATCAACCCG
GGGCAGCTCAAGTGCTGCAGCAACTGCAACTTCTCCTTCTCGGGGCTCTACACCTGCGAC
GACATCGTCAAGAAATGCGACCCTGTCTGCAAGAAATGCGCCGTCGTCAAGACCTACCCT
GTGAAGATGTTCAAGTGCACCGACACCTTCCTCGGCATGTGCGGCCCTCCCTGCAAGCAC
TGA

Peptide Sequence

PEP ID

Os01t0132000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:1760310:1761065:-1 gene:Os01g0132000 transcript:Os01t0132000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:incompatible strain of P. avenae-induced gene 2 description:Similar to Wound-induced protease inhibitor (WIP1). (Os01t0132000-01)
Sequence

MKSSTLLVILAVQAALIMGIFAAVAKENAVGESKAIDINPGQLKCCSNCNFSFSGLYTCD
DIVKKCDPVCKKCAVVKTYPVKMFKCTDTFLGMCGPPCKH

Transcript Sequence

Transcript ID

Os01t0132000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:1760310:1761065:-1 gene:Os01g0132000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:incompatible strain of P. avenae-induced gene 2 description:Similar to Wound-induced protease inhibitor (WIP1). (Os01t0132000-01)
Sequence

AACCACAAACACAAAGCGTAAAGCCATCTACTAGTACCAAGTAGAGGAAATAGCTCAAGG
CTTTGGAACGCAAGAACATCACCATGAAGAGCAGCACTCTCTTGGTGATCCTGGCTGTCC
AGGCCGCTCTTATCATGGGAATCTTTGCTGCTGTTGCAAAAGAAAATGCCGTGGGTGAGA
GCAAGGCGATCGACATCAACCCGGGGCAGCTCAAGTGCTGCAGCAACTGCAACTTCTCCT
TCTCGGGGCTCTACACCTGCGACGACATCGTCAAGAAATGCGACCCTGTCTGCAAGAAAT
GCGCCGTCGTCAAGACCTACCCTGTGAAGATGTTCAAGTGCACCGACACCTTCCTCGGCA
TGTGCGGCCCTCCCTGCAAGCACTGATCGATCGATCGATCGATGATGACCTGAATAATGC
ATGAACGCGAGCCATTGCTGTCATATATCTGTGATCTGTGTGATATACAGTGTGCATTAT
ATATCATATCTCGATGCTAGTATACTGTATACTCGAACAATAAGCCGTTGTCTGAGTGAA
GGACCAAATAAAAATAATGAAGCT