Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0131300-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:1738868:1739820:1 gene:Os01g0131300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0131300-01)
Sequence

ATGGACAGTTCTAATAACAACAACAACAACAAGAGGGCGCGCGACGCCGAGGATGAGGCC
GACGAGGCCAAGAGGCTGCGGGCGGAGGACCTGCTCGACATGCTCGACGATGATACCGAC
GCCGGGGGCGCCGCCGGCGACCTGGCGTCCGTCATGCGGAGCTTCGAGGAGGAGATTGTT
GCTGGGGATGTCGCCGGGGACGTTGCCCCCACGACGCAGCCCGAGCTCGGGTTCCTTCTC
GAGGCCTCCGACGACGAGCTCGGCCTGCCGCCCGCCACCGCGTCCTCGTCGGAGGAGGAG
GCCGGGGCTGGGGAGCCCGAGGATGCCATCGGGTTCGGCGGACAGATCTGGGGGTTCGAG
GACGAGATTGGCGGAGGCGGCTACGCTGGCTTCGCCCTCACCTCGCCGGAGGCGGTCGCC
GCCGCCGCCGCCGCGGCGGAGTGGGACGACGACGGCTTCGACGCCGGCTTGTTCGGCTTC
GGCGACGAGGTCTCGGCGCTTCGCCACGAGACCATGCCGGCCGTCTGA

Peptide Sequence

PEP ID

Os01t0131300-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:1738868:1739820:1 gene:Os01g0131300 transcript:Os01t0131300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0131300-01)
Sequence

MDSSNNNNNNKRARDAEDEADEAKRLRAEDLLDMLDDDTDAGGAAGDLASVMRSFEEEIV
AGDVAGDVAPTTQPELGFLLEASDDELGLPPATASSSEEEAGAGEPEDAIGFGGQIWGFE
DEIGGGGYAGFALTSPEAVAAAAAAAEWDDDGFDAGLFGFGDEVSALRHETMPAV

Transcript Sequence

Transcript ID

Os01t0131300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:1738868:1739820:1 gene:Os01g0131300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0131300-01)
Sequence

ACCGCAAAGCAACCCCCCCTTGCTTTTTGTACTCTTCCATCTCACAATCTCTCTATCTCT
CTCTCTCTTCCTTACGCGGCAAAACACACCGTCGTCCATGGACAGTTCTAATAACAACAA
CAACAACAAGAGGGCGCGCGACGCCGAGGATGAGGCCGACGAGGCCAAGAGGCTGCGGGC
GGAGGACCTGCTCGACATGCTCGACGATGATACCGACGCCGGGGGCGCCGCCGGCGACCT
GGCGTCCGTCATGCGGAGCTTCGAGGAGGAGATTGTTGCTGGGGATGTCGCCGGGGACGT
TGCCCCCACGACGCAGCCCGAGCTCGGGTTCCTTCTCGAGGCCTCCGACGACGAGCTCGG
CCTGCCGCCCGCCACCGCGTCCTCGTCGGAGGAGGAGGCCGGGGCTGGGGAGCCCGAGGA
TGCCATCGGGTTCGGCGGACAGATCTGGGGGTTCGAGGACGAGATTGGCGGAGGCGGCTA
CGCTGGCTTCGCCCTCACCTCGCCGGAGGCGGTCGCCGCCGCCGCCGCCGCGGCGGAGTG
GGACGACGACGGCTTCGACGCCGGCTTGTTCGGCTTCGGCGACGAGGTCTCGGCGCTTCG
CCACGAGACCATGCCGGCCGTCTGATGGGCCTGGGCCGAAGTGGATTAGTTTTTTTTTAT
TTTCCTCGTTTTTTTTAAATTTGGCTAACCTTAGCTCTACCCTTGTTTAACCTTGGATGT
AAAGTTTCTAGTAGAAGGTTAAAAAAACAGAGGGGAGGAAACTTGGAAAAAAGTTTCATG
GATGGAGAGGAGAAAAAAAAAACAGATGTAGGCATGGTTAAAAGAAAAAATCTGATGACA
ATGCCTCACGAACAAAAATGAGAAGAATGGCTTCATGCCTTCATACCAGTACTACGACCT
TACAAATATTTTATTTCAAGCAAACGAAAGATTTAATTTAATCAGCTGCCACG