Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0130900-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:1712137:1712947:-1 gene:Os01g0130900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0130900-01)
Sequence

ATGAAGCGGACGAGAGCGCAGCAGCCGAAGCTCCAGGAGGGGCAGGACGGCGGCGGCGCG
GCCGGGAACGCCAACCCGAAGCCGCAGCGGAGGGCGAAGCAGCCGAGGCAGCCCAAGGCG
GCGTCGGCGGCAGCCAAGAAGGCGGCGGCGGCGGCGGCGGCGCGCGAGTCGTCGTCGTCG
TCTGTGGGGGCGGGGGCGGCAGTGACATCCGCGGCGTCCTCCTCCTGCTCCTCCGGAGCG
GACATGGCGCCCACCGTGCCCGACGTGTGTGGCGGCGGCGGCGGCGGCGCGGGATACGAG
GCCGGGGCGGCGACCACCGTCGAGTGGGACCTCGACGGCGGGCTCAGCAACGGGTTGTCG
TGGTGGACGTTCGGGGTGGAGGAGGAGAAGCTGCTGGGGTGGTTCCCCTTCGTGGAGGAG
GACTTCCGCTGCCTCGGCGCCCGCGGCGACGCCGAGATGGCCTTCGACGACGACATTTGG
AGGATCCACCAAATCTACGAGATACCCAATTACGCCGCCAAGTGA

Peptide Sequence

PEP ID

Os01t0130900-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:1712137:1712947:-1 gene:Os01g0130900 transcript:Os01t0130900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0130900-01)
Sequence

MKRTRAQQPKLQEGQDGGGAAGNANPKPQRRAKQPRQPKAASAAAKKAAAAAAARESSSS
SVGAGAAVTSAASSSCSSGADMAPTVPDVCGGGGGGAGYEAGAATTVEWDLDGGLSNGLS
WWTFGVEEEKLLGWFPFVEEDFRCLGARGDAEMAFDDDIWRIHQIYEIPNYAAK

Transcript Sequence

Transcript ID

Os01t0130900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:1712137:1712947:-1 gene:Os01g0130900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0130900-01)
Sequence

GCCAAAACACTCCCACTCTCACTGACTCACACCCCGTCACTCCCCTCTTCTCCTCACCTC
GCCTCGCCGCGCCGCGCCGCGCGCTGAAGAGGAGGCATGAAGCGGACGAGAGCGCAGCAG
CCGAAGCTCCAGGAGGGGCAGGACGGCGGCGGCGCGGCCGGGAACGCCAACCCGAAGCCG
CAGCGGAGGGCGAAGCAGCCGAGGCAGCCCAAGGCGGCGTCGGCGGCAGCCAAGAAGGCG
GCGGCGGCGGCGGCGGCGCGCGAGTCGTCGTCGTCGTCTGTGGGGGCGGGGGCGGCAGTG
ACATCCGCGGCGTCCTCCTCCTGCTCCTCCGGAGCGGACATGGCGCCCACCGTGCCCGAC
GTGTGTGGCGGCGGCGGCGGCGGCGCGGGATACGAGGCCGGGGCGGCGACCACCGTCGAG
TGGGACCTCGACGGCGGGCTCAGCAACGGGTTGTCGTGGTGGACGTTCGGGGTGGAGGAG
GAGAAGCTGCTGGGGTGGTTCCCCTTCGTGGAGGAGGACTTCCGCTGCCTCGGCGCCCGC
GGCGACGCCGAGATGGCCTTCGACGACGACATTTGGAGGATCCACCAAATCTACGAGATA
CCCAATTACGCCGCCAAGTGATCGATCGGATTCATCTTTGGTTTTTTCCCCTAGATTACT
TGGTAGTAATTGTTGCGTGGTACAGGAATCAATGTCGAGTGCGTAGCCAACAATGTGTTG
ACGAGGTTAGCTAGCTGGAGTAGCTGATGATGTGGTGGCATCTCAATTCCCAGATTGCAA
ATTGCTGCAATTCCAAATGCCCCTTCTTTGC