Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0130400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:1698203:1703090:1 gene:Os01g0130400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alpha-xylosidase precursor (Fragment). (Os01t0130400-01)
Sequence	ATGCGAGAAATGCTGGCGTCTCTCTCTTCTTCGTCCCGTGCGGCCATCTCCTGCATCCCG TTGTGTCTCCTCTTCCTGACCTTGGCGAGCAGCAATGGCGTGTTTGCCGCAGCACCACCC AAGGTTGGGTCCGGGTACAAGCTTGTGTCCCTGGTCGAGCACCCCGAGGGAGGAGCTCTC GTTGGATACCTGCAGGTGAAGCAGCGCACCTCCACCTACGGCCCGGACATCCCTCTCCTC AGGCTCTATGTCAAGCACGAGACCAAGGACAGGATACGAGTCCAGATCACGGACGCAGAC AAGCCGAGGTGGGAGGTCCCCTACAACCTTCTCCAGAGGGAGCCAGCCCCGCCCGTCACC GGCGGGAGGATCACCGGCGTGCCCTTCGCCGCCGGCGAGTACCCGGGTGAGGAGCTCGTG TTCACCTACGGCCGCGACCCGTTCTGGTTCGCGGTGCACCGGAAGTCCAGCCGCGAGGCG CTCTTCAACACCAGCTGCGGCGCGCTGGTGTTCAAGGACCAGTACATCGAGGCGTCGACG TCGCTGCCCAGGGACGCGGCGCTGTACGGCCTCGGCGAGAACACGCAGCCGGGCGGCATC CGGCTGCGCCCCAACGACCCGTACACCATCTACACCACGGACATCTCGGCGATCAACCTC AACACCGACCTCTACGGCTCGCACCCGGTGTACGTGGACCTCAGGAGCCGTGGCGGCCAT GGCGTCGCGCACGCCGTGCTGCTGCTGAACAGCAACGGCATGGACGTGTTCTACAGGGGG ACGTCGCTGACGTACAAGGTCATCGGTGGCCTCCTCGATTTCTACCTCTTCTCCGGGCCG ACGCCGTTGGCCGTGGTGGATCAGTACACGTCCATGATCGGACGACCAGCCCCAATGCCG TACTGGGCATTTGGGTTCCACCAATGCAGATGGGGATACAAGAACTTGTCAGTGGTCGAG GGCGTCGTGGAGGGCTACCGGAACGCGCAAATCCCCCTCGACGTGATCTGGAACGACGAC GATCACATGGACGCCGCGAAGGATTTCACCCTTGATCCCGTGAACTACCCGCGTCCCAAG CTGCTGGAATTCCTTGACAAGATCCATGCACAGGGCATGAAGTACATTGTCCTCATCGAC CCCGGCATCGCCGTGAACAACACCTATGGCGTGTACCAGCGCGGCATGCAGGGCGACGTC TTCATCAAGCTGGACGGGAAGCCATACCTGGCGCAGGTGTGGCCCGGCCCCGTCTACTTC CCGGACTTCCTCAACCCCAATGGCGTCTCGTGGTGGATCGACGAGGTGAGGAGGTTTCAT GACCTTGTGCCCGTGGATGGCCTCTGGATCGACATGAACGAGGCATCCAACTTCTGCACC GGGAAATGCGAGATCCCGACGACGCACCTGTGCCCTCTGCCCAACACGACGACGCCATGG GTGTGCTGCTTGGACTGCAAGAACCTGACGAACACCAGGTGGGACGAGCCGCCGTACAAG ATCAACGCCTCCGGCCAGACGGCGCGGCTCGGCTTCAACACCATCGCCACCAGCGCGACG CACTACAATGGCATCCTGGAGTACAATGCGCACAGCCTGTATGGATTCTCGCAGGCCATC GCGACGCACCAGGCGCTGCAGGGGCTCCAGGGCAAGCGGCCGTTCATCCTGACGCGCTCT ACGTTCGTCGGGTCGGGCGCCTACGCCGCGCACTGGACCGGCGACAACAAGGGCACCTGG GAGAATCTCCGCTACTCCATCTCCACCATGCTCAACTTCGGCATCTTCGGCATGCCGATG GTCGGCGCCGACATCTGCGGGTTCTACCCGCAGCCGACGGAGGAGCTCTGCAACCGGTGG ATCGAGCTCGGCGCGTTCTACCCGTTCTCCAGGGACCATGCCAACTTCGCGTCGCCGAGG CAGGAGCTGTATGTGTGGGAGTCCGTGGCCAAGTCGGCTCGGAACGCGCTCGGCATGCGG TACAGGCTGCTCCCTTACCTGTACACGCTCAACTACCAGGCGCATCTCACCGGCGCTCCG GTGGCGCGGCCGGTGTTCTTCTCGTTCCCGGACTTCACGCCGTGCTACGGGCTGAGCACG CAGTACCTGCTCGGCGCGAGCGTCATGGTGTCGCCGGTGCTCGAGCAGGGCGCCACCTCG GTGAGCGCCATGTTCCCGCCGGGGAGCTGGTACAACCTGTTCGACACGACCAAGGTGGTG GTGTCCAGGGGCGAGGGCGCCGTGAAGCTGGACGCGCCGCTCAACGAGATCAACGTGCAC GTGTTCCAGAACACGATCCTCCCGATGCAGCGCGGCGGGACGATCTCCAAGGAGGCCCGC GCGACGCCGTTCACGCTGGTGGTCGCGTTCCCGTTCGGCGCCACCGAGGCGGAGGCCGAG GGCGCCGTGTACGTCGACGACGACGAGCGGCCGGAGATGGTGCTCGCGGAGGGGCAGGCG ACGTACGTCCGCTTCTACGCGACGGTGCGCGGCAAGGCGGTGACGGTGAGGTCGGAGGTG GAGCTAGGCAGCTACAGCTTGCAGAAGGGGCTCCTCATCGAGAAGCTGTCCGTGCTCGGA CTGGAGGGAACAGGCAGGGACCTCGCCGTCCATGTCGATGGCGCGAACGCCACCGCCATT GCAACGTCGAGGCCGTACTTTGCAGGTGCCGAGGCGGAGCTGCACGGGCACCGCGACGTG GAGGGACACAAGAAGAGCGTGATGGTGGAGGTGGGAGGGCTGGCATTGCCGCTGGGCAAG AGCTTCACCATGACTTGGAACATGCAGATCGAAGCATAG

Peptide Sequence

PEP ID	Os01t0130400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:1698203:1703090:1 gene:Os01g0130400 transcript:Os01t0130400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alpha-xylosidase precursor (Fragment). (Os01t0130400-01)
Sequence	MREMLASLSSSSRAAISCIPLCLLFLTLASSNGVFAAAPPKVGSGYKLVSLVEHPEGGAL VGYLQVKQRTSTYGPDIPLLRLYVKHETKDRIRVQITDADKPRWEVPYNLLQREPAPPVT GGRITGVPFAAGEYPGEELVFTYGRDPFWFAVHRKSSREALFNTSCGALVFKDQYIEAST SLPRDAALYGLGENTQPGGIRLRPNDPYTIYTTDISAINLNTDLYGSHPVYVDLRSRGGH GVAHAVLLLNSNGMDVFYRGTSLTYKVIGGLLDFYLFSGPTPLAVVDQYTSMIGRPAPMP YWAFGFHQCRWGYKNLSVVEGVVEGYRNAQIPLDVIWNDDDHMDAAKDFTLDPVNYPRPK LLEFLDKIHAQGMKYIVLIDPGIAVNNTYGVYQRGMQGDVFIKLDGKPYLAQVWPGPVYF PDFLNPNGVSWWIDEVRRFHDLVPVDGLWIDMNEASNFCTGKCEIPTTHLCPLPNTTTPW VCCLDCKNLTNTRWDEPPYKINASGQTARLGFNTIATSATHYNGILEYNAHSLYGFSQAI ATHQALQGLQGKRPFILTRSTFVGSGAYAAHWTGDNKGTWENLRYSISTMLNFGIFGMPM VGADICGFYPQPTEELCNRWIELGAFYPFSRDHANFASPRQELYVWESVAKSARNALGMR YRLLPYLYTLNYQAHLTGAPVARPVFFSFPDFTPCYGLSTQYLLGASVMVSPVLEQGATS VSAMFPPGSWYNLFDTTKVVVSRGEGAVKLDAPLNEINVHVFQNTILPMQRGGTISKEAR ATPFTLVVAFPFGATEAEAEGAVYVDDDERPEMVLAEGQATYVRFYATVRGKAVTVRSEV ELGSYSLQKGLLIEKLSVLGLEGTGRDLAVHVDGANATAIATSRPYFAGAEAELHGHRDV EGHKKSVMVEVGGLALPLGKSFTMTWNMQIEA

Transcript Sequence

Transcript ID	Os01t0130400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:1698203:1703090:1 gene:Os01g0130400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alpha-xylosidase precursor (Fragment). (Os01t0130400-01)
Sequence	AATGAACATGCATGCCACTCAATGCATGCAGTGCAGTAGAGGAGGAGTACTGACACTGCT CAGCGTCCCTCTCCCTGCACATTTACTCGTATGCACAGCACAACACACACTCCTCTCCTC TCCTATCTCCAGGCTCACAGATGAGCTGTGAGCTGTGTGTGTGACACAGTCTACTGCTCT CTCTGTACAAAGGGAGAGGGTGAGAGGAAATTAACAGAGGAAGGAGGGAGAAGAAATGCG AGAAATGCTGGCGTCTCTCTCTTCTTCGTCCCGTGCGGCCATCTCCTGCATCCCGTTGTG TCTCCTCTTCCTGACCTTGGCGAGCAGCAATGGCGTGTTTGCCGCAGCACCACCCAAGGT TGGGTCCGGGTACAAGCTTGTGTCCCTGGTCGAGCACCCCGAGGGAGGAGCTCTCGTTGG ATACCTGCAGGTGAAGCAGCGCACCTCCACCTACGGCCCGGACATCCCTCTCCTCAGGCT CTATGTCAAGCACGAGACCAAGGACAGGATACGAGTCCAGATCACGGACGCAGACAAGCC GAGGTGGGAGGTCCCCTACAACCTTCTCCAGAGGGAGCCAGCCCCGCCCGTCACCGGCGG GAGGATCACCGGCGTGCCCTTCGCCGCCGGCGAGTACCCGGGTGAGGAGCTCGTGTTCAC CTACGGCCGCGACCCGTTCTGGTTCGCGGTGCACCGGAAGTCCAGCCGCGAGGCGCTCTT CAACACCAGCTGCGGCGCGCTGGTGTTCAAGGACCAGTACATCGAGGCGTCGACGTCGCT GCCCAGGGACGCGGCGCTGTACGGCCTCGGCGAGAACACGCAGCCGGGCGGCATCCGGCT GCGCCCCAACGACCCGTACACCATCTACACCACGGACATCTCGGCGATCAACCTCAACAC CGACCTCTACGGCTCGCACCCGGTGTACGTGGACCTCAGGAGCCGTGGCGGCCATGGCGT CGCGCACGCCGTGCTGCTGCTGAACAGCAACGGCATGGACGTGTTCTACAGGGGGACGTC GCTGACGTACAAGGTCATCGGTGGCCTCCTCGATTTCTACCTCTTCTCCGGGCCGACGCC GTTGGCCGTGGTGGATCAGTACACGTCCATGATCGGACGACCAGCCCCAATGCCGTACTG GGCATTTGGGTTCCACCAATGCAGATGGGGATACAAGAACTTGTCAGTGGTCGAGGGCGT CGTGGAGGGCTACCGGAACGCGCAAATCCCCCTCGACGTGATCTGGAACGACGACGATCA CATGGACGCCGCGAAGGATTTCACCCTTGATCCCGTGAACTACCCGCGTCCCAAGCTGCT GGAATTCCTTGACAAGATCCATGCACAGGGCATGAAGTACATTGTCCTCATCGACCCCGG CATCGCCGTGAACAACACCTATGGCGTGTACCAGCGCGGCATGCAGGGCGACGTCTTCAT CAAGCTGGACGGGAAGCCATACCTGGCGCAGGTGTGGCCCGGCCCCGTCTACTTCCCGGA CTTCCTCAACCCCAATGGCGTCTCGTGGTGGATCGACGAGGTGAGGAGGTTTCATGACCT TGTGCCCGTGGATGGCCTCTGGATCGACATGAACGAGGCATCCAACTTCTGCACCGGGAA ATGCGAGATCCCGACGACGCACCTGTGCCCTCTGCCCAACACGACGACGCCATGGGTGTG CTGCTTGGACTGCAAGAACCTGACGAACACCAGGTGGGACGAGCCGCCGTACAAGATCAA CGCCTCCGGCCAGACGGCGCGGCTCGGCTTCAACACCATCGCCACCAGCGCGACGCACTA CAATGGCATCCTGGAGTACAATGCGCACAGCCTGTATGGATTCTCGCAGGCCATCGCGAC GCACCAGGCGCTGCAGGGGCTCCAGGGCAAGCGGCCGTTCATCCTGACGCGCTCTACGTT CGTCGGGTCGGGCGCCTACGCCGCGCACTGGACCGGCGACAACAAGGGCACCTGGGAGAA TCTCCGCTACTCCATCTCCACCATGCTCAACTTCGGCATCTTCGGCATGCCGATGGTCGG CGCCGACATCTGCGGGTTCTACCCGCAGCCGACGGAGGAGCTCTGCAACCGGTGGATCGA GCTCGGCGCGTTCTACCCGTTCTCCAGGGACCATGCCAACTTCGCGTCGCCGAGGCAGGA GCTGTATGTGTGGGAGTCCGTGGCCAAGTCGGCTCGGAACGCGCTCGGCATGCGGTACAG GCTGCTCCCTTACCTGTACACGCTCAACTACCAGGCGCATCTCACCGGCGCTCCGGTGGC GCGGCCGGTGTTCTTCTCGTTCCCGGACTTCACGCCGTGCTACGGGCTGAGCACGCAGTA CCTGCTCGGCGCGAGCGTCATGGTGTCGCCGGTGCTCGAGCAGGGCGCCACCTCGGTGAG CGCCATGTTCCCGCCGGGGAGCTGGTACAACCTGTTCGACACGACCAAGGTGGTGGTGTC CAGGGGCGAGGGCGCCGTGAAGCTGGACGCGCCGCTCAACGAGATCAACGTGCACGTGTT CCAGAACACGATCCTCCCGATGCAGCGCGGCGGGACGATCTCCAAGGAGGCCCGCGCGAC GCCGTTCACGCTGGTGGTCGCGTTCCCGTTCGGCGCCACCGAGGCGGAGGCCGAGGGCGC CGTGTACGTCGACGACGACGAGCGGCCGGAGATGGTGCTCGCGGAGGGGCAGGCGACGTA CGTCCGCTTCTACGCGACGGTGCGCGGCAAGGCGGTGACGGTGAGGTCGGAGGTGGAGCT AGGCAGCTACAGCTTGCAGAAGGGGCTCCTCATCGAGAAGCTGTCCGTGCTCGGACTGGA GGGAACAGGCAGGGACCTCGCCGTCCATGTCGATGGCGCGAACGCCACCGCCATTGCAAC GTCGAGGCCGTACTTTGCAGGTGCCGAGGCGGAGCTGCACGGGCACCGCGACGTGGAGGG ACACAAGAAGAGCGTGATGGTGGAGGTGGGAGGGCTGGCATTGCCGCTGGGCAAGAGCTT CACCATGACTTGGAACATGCAGATCGAAGCATAGATCGAAGCTTTCTTATGCTTTCATCT GCATTTCTCCATTCTGTCTCTCTGATTATTTTAGGTTCTAGATCAGCAAGGTTATGTCAA CGTGTTCAACGACACACCACCATCTCTGATTCTCTTCTGCATTTGAATCCTTGTGGAAAT AAAACATGATTCTAAACATATATCCTTCTTTCTGACTCTTACATGTGCGCACAAGGGAGA CAGTCGAAAGAACATCGGCTAGATTGCGGATTTGCGGTACGAATGCCCTCACGAATACTT GAGAGAGTGGTACTAACTTGAGAGAGAGTAGATAATACTAGAAAATCTGTCACATAATGT ATAGGCAGTCCCTAGTAGAAATATATTACATCTCCCGTCTCTTTACTCTTTCCAAAGGAG GAAGTCGAAGGTAACAAAGTTTGAATTTAATTCGGATTATGCTTGGACAGCTTAGACTGT CCATC