Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0129600-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:1657306:1658388:1 gene:Os01g0129600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LBD40 (LOB DOMAIN-CONTAINING PROTEIN 40). (Os01t0129600-00)
Sequence	CTCGGCATTGCTAGCTCGATCTCACCGGTCGTCGTCTCCGGCGAGCCGCGCGGGTTAGTT TGCGAGGATCATGCGGATGAGCTGCAACGGGTGCCGCGTGCTGCGCAAGGGGTGCAGCGA CAACTGCGCCATCCGCCCCTGCCTGCAGTGGATTCGCAGCCCCGATGCGCAGGCCAACGC CACCGTCTTCCTCGCCAAGTTCTACGGCCGCGCCGGCCTCATCAACCTCATCACCGCCGG CCCCGAGCACTTCGTTCTCTGACTCTTGGGTTGCGTACGTGTGCAGCCATATTCCGGTCG CTGCTGTACGAGGCTTGCGGGCGGATGCTGAACCCGGTGTACGGATCCGTCGGCCTCCTC TGGTCGGGGAACTGGCAGCTTTGCCAGTCCGCCGTCGAGTCCGTCCTCCGCGGCATGCCC ATCGCGCAGCCGCCGCCGTCCGCCACCGCCGTGCCCCCGCTCCCCACCTGCGACATCCGC CACGTCGGCGCCAGGAGAGGCGACGTCCATGGCGCCGCGGCCGGCCCGGTTGCCGACCTC CACCGGCTTGACATCAGCTCGCGCGCCAAGTTCAAGAGGCCCGGCGGCGGCGCCGCCGCC GCCCACAGGTCCGACCATGCCGCCTTCGAGCTCGTCTTCTCCAAGCCCGCCGCCGCCATG GCCGTCGATGTGATAAGGCAGGCGCAGCCGCTCAACTGGGCGCCCGGGGCGCTCAGCCAC GAGTCGGCGAGCCACGACGCCGCGCCGCCGGAGAGCGAGGGCCACAGCAACGACACGGCC GACACCGTGGACGGCTCCCACGTCAGCCAGTCGGAGCCGGAGCCGAGAGCGACGTCGGCG GCGACCGAGGTGCACGACGCCGGCCTAGACCTCACATTAGGTCTACCGCCGCCGCCGCCG CCGGTGCAAAAGACCGAGCCGGCGGACAGCGACGGCGGCAGCCAGCAGCAACACGATCAT CGGAAGGAGAAGCCGGTGGAGCTCGGCTTGGCGATCTCAACTAAAGTAGCAGCTCAATGA

Peptide Sequence

PEP ID	Os01t0129600-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:1657306:1658388:1 gene:Os01g0129600 transcript:Os01t0129600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LBD40 (LOB DOMAIN-CONTAINING PROTEIN 40). (Os01t0129600-00)
Sequence	LGIASSISPVVVSGEPRGLVCEDHADELQRVPRAAQGVQRQLRHPPLPAVDSQPRCAGQR HRLPRQVLRPRRPHQPHHRRPRALRSLTLGLRTCAAIFRSLLYEACGRMLNPVYGSVGLL WSGNWQLCQSAVESVLRGMPIAQPPPSATAVPPLPTCDIRHVGARRGDVHGAAAGPVADL HRLDISSRAKFKRPGGGAAAAHRSDHAAFELVFSKPAAAMAVDVIRQAQPLNWAPGALSH ESASHDAAPPESEGHSNDTADTVDGSHVSQSEPEPRATSAATEVHDAGLDLTLGLPPPPP PVQKTEPADSDGGSQQQHDHRKEKPVELGLAISTKVAAQ

Transcript Sequence

Transcript ID	Os01t0129600-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:1657306:1658388:1 gene:Os01g0129600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LBD40 (LOB DOMAIN-CONTAINING PROTEIN 40). (Os01t0129600-00)
Sequence	CTCGGCATTGCTAGCTCGATCTCACCGGTCGTCGTCTCCGGCGAGCCGCGCGGGTTAGTT TGCGAGGATCATGCGGATGAGCTGCAACGGGTGCCGCGTGCTGCGCAAGGGGTGCAGCGA CAACTGCGCCATCCGCCCCTGCCTGCAGTGGATTCGCAGCCCCGATGCGCAGGCCAACGC CACCGTCTTCCTCGCCAAGTTCTACGGCCGCGCCGGCCTCATCAACCTCATCACCGCCGG CCCCGAGCACTTCGTTCTCTGACTCTTGGGTTGCGTACGTGTGCAGCCATATTCCGGTCG CTGCTGTACGAGGCTTGCGGGCGGATGCTGAACCCGGTGTACGGATCCGTCGGCCTCCTC TGGTCGGGGAACTGGCAGCTTTGCCAGTCCGCCGTCGAGTCCGTCCTCCGCGGCATGCCC ATCGCGCAGCCGCCGCCGTCCGCCACCGCCGTGCCCCCGCTCCCCACCTGCGACATCCGC CACGTCGGCGCCAGGAGAGGCGACGTCCATGGCGCCGCGGCCGGCCCGGTTGCCGACCTC CACCGGCTTGACATCAGCTCGCGCGCCAAGTTCAAGAGGCCCGGCGGCGGCGCCGCCGCC GCCCACAGGTCCGACCATGCCGCCTTCGAGCTCGTCTTCTCCAAGCCCGCCGCCGCCATG GCCGTCGATGTGATAAGGCAGGCGCAGCCGCTCAACTGGGCGCCCGGGGCGCTCAGCCAC GAGTCGGCGAGCCACGACGCCGCGCCGCCGGAGAGCGAGGGCCACAGCAACGACACGGCC GACACCGTGGACGGCTCCCACGTCAGCCAGTCGGAGCCGGAGCCGAGAGCGACGTCGGCG GCGACCGAGGTGCACGACGCCGGCCTAGACCTCACATTAGGTCTACCGCCGCCGCCGCCG CCGGTGCAAAAGACCGAGCCGGCGGACAGCGACGGCGGCAGCCAGCAGCAACACGATCAT CGGAAGGAGAAGCCGGTGGAGCTCGGCTTGGCGATCTCAACTAAAGTAGCAGCTCAATGA