Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0128200-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:1566147:1569467:1 gene:Os01g0128200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nuclease I. (Os01t0128200-01)
Sequence

ATGGCACTCGCAGCGCCTCTGCTCCGCCTCCGGCTGCTGCCTCTCGCCGCCTTCGTCTCC
GTCGTCTCCCTCACCGCGGCGCCTCGGCGTGCGGAGGCGTGGGGCAAGCAGGGCCACATC
ATCGTCTGCAAGATCGCCGAGAAGTACCTGTCGGAGAAGGCGGCGGCGGCGGTGGAGGAG
CTGCTGCCGGAGTCGGCCGGCGGGGAGCTGTCGACGGTGTGCCCGTGGGCCGACGAGGTG
CGATTCCACTACTACTGGTCTCGTCCTCTCCACTACGCCAACACCCCCCAAGTCTGCAAC
TTCAAGTACTCACGGGACTGCCATAATTCTCGTCACCAGCAAGGGATGTGCGTTGTCGGG
GCTATCAACAACTACACCGATCAGCTCTACAGCTATGGCGATTCAAAGAGTTCATACAAC
CTGACGGAGAGCCTGATGTTCCTGGCCCACTTCGTCGGCGACGTGCACCAGCCGCTGCAC
GTCGGCTTCGAGGAAGACGAAGGGGGCAACACCATCAAAGTGCACTGGTACCGGAGGAAG
GAAAACCTTCACCATGTGTGGGACAACAGCATCATAGAGACGGCCATGAAGGACTTCTAT
AACAGAAGCTTGGATACCATGGTGGAGGCTCTCAAGATGAACCTCACAGATGGATGGTCT
GAAGATATCAGTCACTGGGAAAATTGTGGCAACAAAAAGGAAACCTGTGCAAATGACTAT
GCAATTGAGAGCATACATCTGTCCTGCAATTATGCCTACAAAGATGTTGAGCAAGACATT
ACTCTAGGAGATGACTATTTCTACTCTCGGTACCCAATCGTGGAGAAGAGGCTAGCACAG
GCCGGCATCAGATTGGCGTTGATACTGAACCGGATATTTGGTGAGGATAAACCAGATGGT
AATGTCATACCATTACAAGTTCAGTAA

Peptide Sequence

PEP ID

Os01t0128200-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:1566147:1569467:1 gene:Os01g0128200 transcript:Os01t0128200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nuclease I. (Os01t0128200-01)
Sequence

MALAAPLLRLRLLPLAAFVSVVSLTAAPRRAEAWGKQGHIIVCKIAEKYLSEKAAAAVEE
LLPESAGGELSTVCPWADEVRFHYYWSRPLHYANTPQVCNFKYSRDCHNSRHQQGMCVVG
AINNYTDQLYSYGDSKSSYNLTESLMFLAHFVGDVHQPLHVGFEEDEGGNTIKVHWYRRK
ENLHHVWDNSIIETAMKDFYNRSLDTMVEALKMNLTDGWSEDISHWENCGNKKETCANDY
AIESIHLSCNYAYKDVEQDITLGDDYFYSRYPIVEKRLAQAGIRLALILNRIFGEDKPDG
NVIPLQVQ

Transcript Sequence

Transcript ID

Os01t0128200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:1566147:1569467:1 gene:Os01g0128200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nuclease I. (Os01t0128200-01)
Sequence

GAGCTGACCACCACCGGAGATGGCACTCGCAGCGCCTCTGCTCCGCCTCCGGCTGCTGCC
TCTCGCCGCCTTCGTCTCCGTCGTCTCCCTCACCGCGGCGCCTCGGCGTGCGGAGGCGTG
GGGCAAGCAGGGCCACATCATCGTCTGCAAGATCGCCGAGAAGTACCTGTCGGAGAAGGC
GGCGGCGGCGGTGGAGGAGCTGCTGCCGGAGTCGGCCGGCGGGGAGCTGTCGACGGTGTG
CCCGTGGGCCGACGAGGTGCGATTCCACTACTACTGGTCTCGTCCTCTCCACTACGCCAA
CACCCCCCAAGTCTGCAACTTCAAGTACTCACGGGACTGCCATAATTCTCGTCACCAGCA
AGGGATGTGCGTTGTCGGGGCTATCAACAACTACACCGATCAGCTCTACAGCTATGGCGA
TTCAAAGAGTTCATACAACCTGACGGAGAGCCTGATGTTCCTGGCCCACTTCGTCGGCGA
CGTGCACCAGCCGCTGCACGTCGGCTTCGAGGAAGACGAAGGGGGCAACACCATCAAAGT
GCACTGGTACCGGAGGAAGGAAAACCTTCACCATGTGTGGGACAACAGCATCATAGAGAC
GGCCATGAAGGACTTCTATAACAGAAGCTTGGATACCATGGTGGAGGCTCTCAAGATGAA
CCTCACAGATGGATGGTCTGAAGATATCAGTCACTGGGAAAATTGTGGCAACAAAAAGGA
AACCTGTGCAAATGACTATGCAATTGAGAGCATACATCTGTCCTGCAATTATGCCTACAA
AGATGTTGAGCAAGACATTACTCTAGGAGATGACTATTTCTACTCTCGGTACCCAATCGT
GGAGAAGAGGCTAGCACAGGCCGGCATCAGATTGGCGTTGATACTGAACCGGATATTTGG
TGAGGATAAACCAGATGGTAATGTCATACCATTACAAGTTCAGTAAGGGTTATGATCACC
AGAAATATTCAGGAGAAATGTTATTTGTTGCTGCCACTCTAATTAGTGGTTGTGCACATA
TTTTATAAAAAGCACACATACCTATAGTATAGAATTCAAAAATGTAATTGTTGTAATTGC
TTATTGGAAAGCACATTTATTTGTAAGAAGCACATAGGCCTAGTACAGCATTCAAAACTG
TAAATGCTGTCATTCATGTACAATTGAAAGTAGTCTGTGACAAGAAACACATAAGCCTAG
TATAGCATTCATAAATGTAATTGTTGTAATTCCTCTATGTTTGAACAGTGTACCACTTGA
ATAAGTGTGTTTCAAATCGATTCATTTCCC