Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0127900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:1534135:1539601:1 gene:Os01g0127900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mannose-6-phosphate isomerase domain containing protein. (Os01t0127900-01)
Sequence	ATGGCCGGCCCTACTCCTCCTCCGCCGGAGGAGGAGCCCTCCTCCCCTTCCCTGCGCCTG CGCTGCGCGGTGCAGCACTACGAGTGGGGCCGACGCGGGGAGGCCTCCCTCGTCGCCCGC CTCTCCGACGCCAACGCCGACGACCACGGCCCCGACCCCGCGCGCCCCTACGCCGAGCTG TGGATGGGCACGCACCCCTCCGCGCCCTCCTCCCTCCTCGCCGACGGCCTCCTCAGGGAC TGGCTCGCGCGCCACCCCGCCGCGCTCGGCCCCGCCGTCGCCGCTCGCTGGGGAGGCGAC CTCCCATTCCTCTTCAAGGTTCTGTCGGTGGCCAAGGCGCTGTCGATCCAGGCGCACCCG GACAAGGACCTCGCCGAGGTGCTGCACGCGCTGCGTCCGGCCACCTACAAGGACGGCAAC CACAAGCCCGAGATGGCCATCGCCGTCACCGAGTTCCGCGTCCTCTGCGGCTTTGCCGGT ATCCAGGAACTTAAGGACGTTTTAAGAACTGTGCCTGAAGTTGAAGACCTTGTTGGACCT GAAGATGCTGCCAAGCTTTTGTCTGTGAAAGAGTACCATGGTGTCAATGAAGTAAAATCC TGTCTGCGGTCAGCTTTTACTAAGCTAATGACAGCTAGTAAAGAAGCGGTTTCTGAAGCA ATTACAAAATTGATTTTTCGCCTGAATGCTGAGAGCAAGGTAAGGACCTTAACCGAGAAA GAAAATCTAGTTTTGTCGCTGGAGAAACAATACCCAGAAGATGTTGGTGTTCTATCAGCA TTTTTCTTCAATTATATCAAGCTCAGTCCTGGTGAAGCACTTTACATTGGTGCCAATGAA CCACATGCATATCTATCCGGGGAATGCATTGAATGTATGGCCACTTCAGATAATGTTGTT CGTGCTGGTTTGACACCCAAGTACAGAGATGTGCAAACTCTTTGCTCTATGCTAACATAC AAACAGGTCTTTCCAGAAATCTTGCGGGGGGTTCCTGTACAGCCGTATGTAAGAAGGTAC ACCCCTCCGTTTGATGAGTTCGAAGTTGACTGCTGCTCACTACCACCAGGCGAACTGGTT GTGATATCCCCAGTGTCAGGTCCATCCGTCTACCTAGTGATGGCCGGGGAAGGCGAGATC CAGGTAGATTCCATGCCAAATGGTGAAAAGTCTAAACAAGGTGATGTTTTCTTCGTGCCA GCATACACCGAGGTTAAGTTCTCTGCCTCTGGTCCTGAGTGCATGCAGCTGTACAGGGCT GGGGTCAATAGCAGATTCTTCAATTAA

Peptide Sequence

PEP ID	Os01t0127900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:1534135:1539601:1 gene:Os01g0127900 transcript:Os01t0127900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mannose-6-phosphate isomerase domain containing protein. (Os01t0127900-01)
Sequence	MAGPTPPPPEEEPSSPSLRLRCAVQHYEWGRRGEASLVARLSDANADDHGPDPARPYAEL WMGTHPSAPSSLLADGLLRDWLARHPAALGPAVAARWGGDLPFLFKVLSVAKALSIQAHP DKDLAEVLHALRPATYKDGNHKPEMAIAVTEFRVLCGFAGIQELKDVLRTVPEVEDLVGP EDAAKLLSVKEYHGVNEVKSCLRSAFTKLMTASKEAVSEAITKLIFRLNAESKVRTLTEK ENLVLSLEKQYPEDVGVLSAFFFNYIKLSPGEALYIGANEPHAYLSGECIECMATSDNVV RAGLTPKYRDVQTLCSMLTYKQVFPEILRGVPVQPYVRRYTPPFDEFEVDCCSLPPGELV VISPVSGPSVYLVMAGEGEIQVDSMPNGEKSKQGDVFFVPAYTEVKFSASGPECMQLYRA GVNSRFFN

Transcript Sequence

Transcript ID	Os01t0127900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:1534135:1539601:1 gene:Os01g0127900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mannose-6-phosphate isomerase domain containing protein. (Os01t0127900-01)
Sequence	ATCTCCATTCCCAACCCAAACCCCCGCAACCGCAAATCCCGCGCTGCTAGTGCTACCTAG GGTTCGCCTCCCTCCTCCCTCCCAATGGCCGGCCCTACTCCTCCTCCGCCGGAGGAGGAG CCCTCCTCCCCTTCCCTGCGCCTGCGCTGCGCGGTGCAGCACTACGAGTGGGGCCGACGC GGGGAGGCCTCCCTCGTCGCCCGCCTCTCCGACGCCAACGCCGACGACCACGGCCCCGAC CCCGCGCGCCCCTACGCCGAGCTGTGGATGGGCACGCACCCCTCCGCGCCCTCCTCCCTC CTCGCCGACGGCCTCCTCAGGGACTGGCTCGCGCGCCACCCCGCCGCGCTCGGCCCCGCC GTCGCCGCTCGCTGGGGAGGCGACCTCCCATTCCTCTTCAAGGTTCTGTCGGTGGCCAAG GCGCTGTCGATCCAGGCGCACCCGGACAAGGACCTCGCCGAGGTGCTGCACGCGCTGCGT CCGGCCACCTACAAGGACGGCAACCACAAGCCCGAGATGGCCATCGCCGTCACCGAGTTC CGCGTCCTCTGCGGCTTTGCCGGTATCCAGGAACTTAAGGACGTTTTAAGAACTGTGCCT GAAGTTGAAGACCTTGTTGGACCTGAAGATGCTGCCAAGCTTTTGTCTGTGAAAGAGTAC CATGGTGTCAATGAAGTAAAATCCTGTCTGCGGTCAGCTTTTACTAAGCTAATGACAGCT AGTAAAGAAGCGGTTTCTGAAGCAATTACAAAATTGATTTTTCGCCTGAATGCTGAGAGC AAGGTAAGGACCTTAACCGAGAAAGAAAATCTAGTTTTGTCGCTGGAGAAACAATACCCA GAAGATGTTGGTGTTCTATCAGCATTTTTCTTCAATTATATCAAGCTCAGTCCTGGTGAA GCACTTTACATTGGTGCCAATGAACCACATGCATATCTATCCGGGGAATGCATTGAATGT ATGGCCACTTCAGATAATGTTGTTCGTGCTGGTTTGACACCCAAGTACAGAGATGTGCAA ACTCTTTGCTCTATGCTAACATACAAACAGGTCTTTCCAGAAATCTTGCGGGGGGTTCCT GTACAGCCGTATGTAAGAAGGTACACCCCTCCGTTTGATGAGTTCGAAGTTGACTGCTGC TCACTACCACCAGGCGAACTGGTTGTGATATCCCCAGTGTCAGGTCCATCCGTCTACCTA GTGATGGCCGGGGAAGGCGAGATCCAGGTAGATTCCATGCCAAATGGTGAAAAGTCTAAA CAAGGTGATGTTTTCTTCGTGCCAGCATACACCGAGGTTAAGTTCTCTGCCTCTGGTCCT GAGTGCATGCAGCTGTACAGGGCTGGGGTCAATAGCAGATTCTTCAATTAATTTAGTGAC TGCTGAAAGAGTTCCACACACAATTGCTGTAGGTAAAAGGTCAGTGCTTACAAAATACAA GTGAAATGATATGACTAGTTAGCAAAAGTTACCATATGTACTGTATAGGTCAACAAAAGA ATAAGTCAGGTTCCTTCATATCTTGATTATTTGTTCTTCCAAAGAGGTCTATACCATAGC GTTCCTCACGCATCCAGATCCATCTGAATGGAGAGGATTACAGAGAATAACTTTCAGCCA TTCTATTCTATTACATTGTAGTTCAGAACTAAAATGTGAACTGGTCTCAAGCTTTGACAC CGAATATAGTTGGAAATACTTACAG