Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0127400-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:1508213:1510771:1 gene:Os01g0127400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3326 domain containing protein. (Os01t0127400-00)
Sequence

ATGGCGCTCCACCTCACCCGTCCCTTCCTCCGGCCGTCGCCGCCGCCGCCGCGGCCGACT
CGTCGGAGCTCCCGGGCTCATTGCCTCGCCCCTTCTGCCAGCGCGCGGGGCCCGAGCTTC
AGGAGGCCCTACACGTCCGTCCTGGTGGTCCCCACCGGAGTCGGCGCCGCCGTCGGGGGT
TTCGCCGGCGATGCGCTTCCCGTGGCGCGCGCGCTCGGTGCCGTCGCCGACTGCGTCATC
TCCCACCCCAATGTGCTGAACGCTGCGATGCTCTACTGGCCGATGCCCAACACGCTCTAC
GTTGAGGGATACGCCCTTGACAGGTTCGCTGAAGGATCCTGGGCTCTCCAACCAGTTCAC
CAGAACAAGGTAGGTTTGGTGTTGGATTCTGGAATCGAGGAGGAGCTTCGACTCCGTCAC
TTGCAGGTTGCGGATGCCGCGAGGGCTTCTCTTGGGCTCCCTGTAGTCGAGTACATTGTG
ACTGATACTCCTTTGGAGATCAAGACATGGTTTGATCCAAAATGTGGGAAGTCTACAGGG
AGTGTTGGGAACTCTGATTCTCTCCTGAGGGCAGTTGAGGCCCTGGTGAACCGCTCTGAT
GTGAATGCTGTGGCGGTTGTTGCGCGCTTTCCAGATGATGATCCAGAAGATTCAGATTGT
TATCGGGAAGGAAAGGGAGTTGATCTGTTGGCAGGAGTTGAAGCGATTATCAGTCATCTA
ATTGTGAAGAAATTCAAAATCCCAGCTGCCCATGCTCCTGCAGTTTTACCCCCAGTTCTC
AGTCTGTCAGTGTCCCCAAGATCTGCTGCTGAAGAGATTGGACATACCTTTCTACCTTGT
GTGCTTGCCGGGTTAAGCAATGCCCCTCAATATGTGATGAGGAGGAATGGAAACATGGAT
AATGGTTGCATAGTGGCTAGTGATGTTGATAGTGTGATTCTTCCAAAAGATGCTTGCGGA
GGAGATGGTACTATTGCCTTTGCTAGAACTGCTACAAAGAACAAGCCCTTAATCATTACG
GTTCAAGAAAATGAAACAGTTCTTGATGATACCCCTGACAAGTTCAATATAGAGGCGCTA
AATGTCCAGAACTATTGGGAAGCCATTGGAGTAATCGCAGCTCACAAGGCAGGTATCAAC
CCAAATGCTCTTAGAAGACAAGGAATTGATCATCTTAAAAGCTCTCTTAGACTATACCCT
GCACAAAATCGTGGTTCTAAGAAATCGGCCTGTTCACCACCGCAGGAGAAACTATATACA
CATGAACTAGTTTAA

Peptide Sequence

PEP ID

Os01t0127400-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:1508213:1510771:1 gene:Os01g0127400 transcript:Os01t0127400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3326 domain containing protein. (Os01t0127400-00)
Sequence

MALHLTRPFLRPSPPPPRPTRRSSRAHCLAPSASARGPSFRRPYTSVLVVPTGVGAAVGG
FAGDALPVARALGAVADCVISHPNVLNAAMLYWPMPNTLYVEGYALDRFAEGSWALQPVH
QNKVGLVLDSGIEEELRLRHLQVADAARASLGLPVVEYIVTDTPLEIKTWFDPKCGKSTG
SVGNSDSLLRAVEALVNRSDVNAVAVVARFPDDDPEDSDCYREGKGVDLLAGVEAIISHL
IVKKFKIPAAHAPAVLPPVLSLSVSPRSAAEEIGHTFLPCVLAGLSNAPQYVMRRNGNMD
NGCIVASDVDSVILPKDACGGDGTIAFARTATKNKPLIITVQENETVLDDTPDKFNIEAL
NVQNYWEAIGVIAAHKAGINPNALRRQGIDHLKSSLRLYPAQNRGSKKSACSPPQEKLYT
HELV

Transcript Sequence

Transcript ID

Os01t0127400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:1508213:1510771:1 gene:Os01g0127400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3326 domain containing protein. (Os01t0127400-00)
Sequence

CTCGCTTCGCCGCGGCAATGGCGCTCCACCTCACCCGTCCCTTCCTCCGGCCGTCGCCGC
CGCCGCCGCGGCCGACTCGTCGGAGCTCCCGGGCTCATTGCCTCGCCCCTTCTGCCAGCG
CGCGGGGCCCGAGCTTCAGGAGGCCCTACACGTCCGTCCTGGTGGTCCCCACCGGAGTCG
GCGCCGCCGTCGGGGGTTTCGCCGGCGATGCGCTTCCCGTGGCGCGCGCGCTCGGTGCCG
TCGCCGACTGCGTCATCTCCCACCCCAATGTGCTGAACGCTGCGATGCTCTACTGGCCGA
TGCCCAACACGCTCTACGTTGAGGGATACGCCCTTGACAGGTTCGCTGAAGGATCCTGGG
CTCTCCAACCAGTTCACCAGAACAAGGTAGGTTTGGTGTTGGATTCTGGAATCGAGGAGG
AGCTTCGACTCCGTCACTTGCAGGTTGCGGATGCCGCGAGGGCTTCTCTTGGGCTCCCTG
TAGTCGAGTACATTGTGACTGATACTCCTTTGGAGATCAAGACATGGTTTGATCCAAAAT
GTGGGAAGTCTACAGGGAGTGTTGGGAACTCTGATTCTCTCCTGAGGGCAGTTGAGGCCC
TGGTGAACCGCTCTGATGTGAATGCTGTGGCGGTTGTTGCGCGCTTTCCAGATGATGATC
CAGAAGATTCAGATTGTTATCGGGAAGGAAAGGGAGTTGATCTGTTGGCAGGAGTTGAAG
CGATTATCAGTCATCTAATTGTGAAGAAATTCAAAATCCCAGCTGCCCATGCTCCTGCAG
TTTTACCCCCAGTTCTCAGTCTGTCAGTGTCCCCAAGATCTGCTGCTGAAGAGATTGGAC
ATACCTTTCTACCTTGTGTGCTTGCCGGGTTAAGCAATGCCCCTCAATATGTGATGAGGA
GGAATGGAAACATGGATAATGGTTGCATAGTGGCTAGTGATGTTGATAGTGTGATTCTTC
CAAAAGATGCTTGCGGAGGAGATGGTACTATTGCCTTTGCTAGAACTGCTACAAAGAACA
AGCCCTTAATCATTACGGTTCAAGAAAATGAAACAGTTCTTGATGATACCCCTGACAAGT
TCAATATAGAGGCGCTAAATGTCCAGAACTATTGGGAAGCCATTGGAGTAATCGCAGCTC
ACAAGGCAGGTATCAACCCAAATGCTCTTAGAAGACAAGGAATTGATCATCTTAAAAGCT
CTCTTAGACTATACCCTGCACAAAATCGTGGTTCTAAGAAATCGGCCTGTTCACCACCGC
AGGAGAAACTATATACACATGAACTAGTTTAACAAATTTAGTTGTGCAACTAAAAGTTTA
TAGAATTCAGTTCTGGCAAGATGGGAGCCCCAAATTTTGAAGTCATTTGTACATATTCCA
CAA