Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0126900-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:1486400:1488897:1 gene:Os01g0126900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LOW PHOSPHATE ROOT 4 description:Multicopper oxidase (Os01t0126900-01)
Sequence

ATGATGGGTGAGAATCGAGCGAGGGTCGTGGCGTTGGTGGTGGCTGTAGTGGTGGTCGTC
GTTGGTGTCGCCGGCAATGTCGCGGCGGCGCAGGCGGCGGTGACGGTGGCGGACCTGCAG
AGGGTGGCCGGGTCGCTGCAGATGTACGTGGACGCGCTGCCGCAGATGGCCAAGATCCGT
GGCTATGGATTCCAGCGCGGCCAAGCCGTGCCCATCAACCTCACCATCGGCATGTACCAG
AAGACCTGGAAATTCCACCGCGACCTGCCGGCGACGCCGGTGTTCGTGTACGGGCAGTGC
CCGGACTCGGCGACGTTCCCGGGGCCGACGATCATGGCGCGGCACGACGTGCCGCTGTTC
GTGAGGTGGGAGAACCACCTCCCGGCGTCGCACATCCTTCCGTGGGACCCCACCGTCCCC
ACCGCCATCCCCAAGAACGGCGGCGTCCCCACCGTCGTCCACCTCCACGGCAGCGCCCAC
CCGCCGCAGTCCGACGGCAGCGCCTTCGCCTGGTTCACCGCCGGCTTCGCCGAGAAGGGA
CCCGCCTGGACCCAGGCCACCTACCGCTACCCCAACGTCCAGCCTCCGGGCAACCTCTGG
TACCACGACCACGCCCTCGGCCTCACCCGCGCCAACCTCCTCGCCGGCCTCCTCGGCGCC
TACGTCATCGAGAAGCCCGAGGTGGACACCCCCATGGACCTCCCCTGCGACGACGACGAC
CTTCACCTCGTCATCGCCGACCGGAGCTTCAACGTCGACGGCTCGCTCTACATGAACTCC
ACCGGCGTCGCGCCCAACATCCACCCGCAATGGGCGCCGGAGTACTTCGGCGAGGCCATC
ACCGTCAACGGCAAGGCGTGGCCGTTCCTCGTCGTCCACCGCCGCCGCTACCGCCTCCGC
ATCCTCAACGCCAGCAACGCCCGCTACTTCAACGTCTCCCTCTCCAACGGCCTCCCCATC
CACGTCGTCGGCTCCGACGCGTCCTACCTCTCCGCGCCGGTCACCGTCTCCAACCTCCTC
CTCTCCCCGGCCGAGATCTTCGACGTCGTCGTCGACTTCTCCCAGTCGCCGACGGCCGAG
ATCGAGCTGCTCAACTCGGCGCCCTACCCGTTCCCCACCGGCGCCGCCCCCGGCCCGCTC
AACGGCAAGGTGATGAAGTTCATCGTCCAGCCGAACGGGCCGCTCGACCCGCCGGACAAC
TCGACGGTGCCGGACCACGAGGTGCCGTACGCGAGCGTGACGGCGCTGCCGCCGACGACG
ATGACGAGGTACATCGTGATGTACGAGTACCTGACGCCGACGGGGCAGTCGACGCACCTC
TACATCAACGGGCTCCGCCTGGAGGACCCGGTGACGGAGACGCCCAAGTCCGGCACGACG
GAGCTGTGGCAGGTGATCAACCTCACCGGCGACAACCACCCGCTGCACATCCACCTGGGG
ATGTTCCAGGCGGTGAAGATGCAGCAGCTCGTCAACCTGCAGGCCTTCACCGACTGCATG
ACGGCGGTCAACGACGCGGTCAAGTGCAACGTCGACCAGCACGCCGTCGGCCCCGTCGTG
CCGGTGCCGGACCACGAGAAGACGTGGAAGAACGTCATCAAGGTGCCCCCGGGCTTCGTC
ACCTCGGTGGTCATCGCCTTCAAGCTCGTCGACACCAACCAGACCTACCCCTTCGACACC
ACCGCCGAGCCGGGATACGTCTACCATTGCCACGTAAGCGCCACGTTAAATGCCACGTGT
CTATCTTACTGGGTTAATTTTTTTTCTAATCGAATTTATATGTTCTAA

Peptide Sequence

PEP ID

Os01t0126900-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:1486400:1488897:1 gene:Os01g0126900 transcript:Os01t0126900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LOW PHOSPHATE ROOT 4 description:Multicopper oxidase (Os01t0126900-01)
Sequence

MMGENRARVVALVVAVVVVVVGVAGNVAAAQAAVTVADLQRVAGSLQMYVDALPQMAKIR
GYGFQRGQAVPINLTIGMYQKTWKFHRDLPATPVFVYGQCPDSATFPGPTIMARHDVPLF
VRWENHLPASHILPWDPTVPTAIPKNGGVPTVVHLHGSAHPPQSDGSAFAWFTAGFAEKG
PAWTQATYRYPNVQPPGNLWYHDHALGLTRANLLAGLLGAYVIEKPEVDTPMDLPCDDDD
LHLVIADRSFNVDGSLYMNSTGVAPNIHPQWAPEYFGEAITVNGKAWPFLVVHRRRYRLR
ILNASNARYFNVSLSNGLPIHVVGSDASYLSAPVTVSNLLLSPAEIFDVVVDFSQSPTAE
IELLNSAPYPFPTGAAPGPLNGKVMKFIVQPNGPLDPPDNSTVPDHEVPYASVTALPPTT
MTRYIVMYEYLTPTGQSTHLYINGLRLEDPVTETPKSGTTELWQVINLTGDNHPLHIHLG
MFQAVKMQQLVNLQAFTDCMTAVNDAVKCNVDQHAVGPVVPVPDHEKTWKNVIKVPPGFV
TSVVIAFKLVDTNQTYPFDTTAEPGYVYHCHVSATLNATCLSYWVNFFSNRIYMF

Transcript Sequence

Transcript ID

Os01t0126900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:1486400:1488897:1 gene:Os01g0126900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LOW PHOSPHATE ROOT 4 description:Multicopper oxidase (Os01t0126900-01)
Sequence

ATCATCAGTCGTGTGTCTCTCGTGTGTTAGCCACACGCCACTGTCTAATTGTCTATTATC
CTTTGCATGCCCCTCTCCAGCTGCTTCATCTGTTCGTCCACAAGCAACTAAGATGATGGG
TGAGAATCGAGCGAGGGTCGTGGCGTTGGTGGTGGCTGTAGTGGTGGTCGTCGTTGGTGT
CGCCGGCAATGTCGCGGCGGCGCAGGCGGCGGTGACGGTGGCGGACCTGCAGAGGGTGGC
CGGGTCGCTGCAGATGTACGTGGACGCGCTGCCGCAGATGGCCAAGATCCGTGGCTATGG
ATTCCAGCGCGGCCAAGCCGTGCCCATCAACCTCACCATCGGCATGTACCAGAAGACCTG
GAAATTCCACCGCGACCTGCCGGCGACGCCGGTGTTCGTGTACGGGCAGTGCCCGGACTC
GGCGACGTTCCCGGGGCCGACGATCATGGCGCGGCACGACGTGCCGCTGTTCGTGAGGTG
GGAGAACCACCTCCCGGCGTCGCACATCCTTCCGTGGGACCCCACCGTCCCCACCGCCAT
CCCCAAGAACGGCGGCGTCCCCACCGTCGTCCACCTCCACGGCAGCGCCCACCCGCCGCA
GTCCGACGGCAGCGCCTTCGCCTGGTTCACCGCCGGCTTCGCCGAGAAGGGACCCGCCTG
GACCCAGGCCACCTACCGCTACCCCAACGTCCAGCCTCCGGGCAACCTCTGGTACCACGA
CCACGCCCTCGGCCTCACCCGCGCCAACCTCCTCGCCGGCCTCCTCGGCGCCTACGTCAT
CGAGAAGCCCGAGGTGGACACCCCCATGGACCTCCCCTGCGACGACGACGACCTTCACCT
CGTCATCGCCGACCGGAGCTTCAACGTCGACGGCTCGCTCTACATGAACTCCACCGGCGT
CGCGCCCAACATCCACCCGCAATGGGCGCCGGAGTACTTCGGCGAGGCCATCACCGTCAA
CGGCAAGGCGTGGCCGTTCCTCGTCGTCCACCGCCGCCGCTACCGCCTCCGCATCCTCAA
CGCCAGCAACGCCCGCTACTTCAACGTCTCCCTCTCCAACGGCCTCCCCATCCACGTCGT
CGGCTCCGACGCGTCCTACCTCTCCGCGCCGGTCACCGTCTCCAACCTCCTCCTCTCCCC
GGCCGAGATCTTCGACGTCGTCGTCGACTTCTCCCAGTCGCCGACGGCCGAGATCGAGCT
GCTCAACTCGGCGCCCTACCCGTTCCCCACCGGCGCCGCCCCCGGCCCGCTCAACGGCAA
GGTGATGAAGTTCATCGTCCAGCCGAACGGGCCGCTCGACCCGCCGGACAACTCGACGGT
GCCGGACCACGAGGTGCCGTACGCGAGCGTGACGGCGCTGCCGCCGACGACGATGACGAG
GTACATCGTGATGTACGAGTACCTGACGCCGACGGGGCAGTCGACGCACCTCTACATCAA
CGGGCTCCGCCTGGAGGACCCGGTGACGGAGACGCCCAAGTCCGGCACGACGGAGCTGTG
GCAGGTGATCAACCTCACCGGCGACAACCACCCGCTGCACATCCACCTGGGGATGTTCCA
GGCGGTGAAGATGCAGCAGCTCGTCAACCTGCAGGCCTTCACCGACTGCATGACGGCGGT
CAACGACGCGGTCAAGTGCAACGTCGACCAGCACGCCGTCGGCCCCGTCGTGCCGGTGCC
GGACCACGAGAAGACGTGGAAGAACGTCATCAAGGTGCCCCCGGGCTTCGTCACCTCGGT
GGTCATCGCCTTCAAGCTCGTCGACACCAACCAGACCTACCCCTTCGACACCACCGCCGA
GCCGGGATACGTCTACCATTGCCACGTAAGCGCCACGTTAAATGCCACGTGTCTATCTTA
CTGGGTTAATTTTTTTTCTAATCGAATTTATATGTTCTAATGTGATTTG