Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0125900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:1421693:1427650:1 gene:Os01g0125900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UBIQUITIN-CONJUGATING ENZYME 34 description:Ubiquitin-conjugating enzyme/RWD-like domain containing protein. (Os01t0125900-01)
Sequence	ATGGAAAATCTACCAAATGGCTCAGCAAATATAGCTGAGAAGAACCAGGATAATGAGATG TCTACAGATGCTGGTGAGCCTGAAGAAGTAGCAGATATATTTATTTATAGAGAAGATGTT GTCAGCTTGAAGTCAAAAGAGGACACCCGTGGGTTGGTTTTGGAGGTAGCAGGAGAATAT GATTCTGAAGGTAGCATCACTGATGATGATACTGATACTGAGGAGCATGAACACAAAAGT TCTCATAGGACTGAAAATGGTGGTGCTGATGGTGATAATGTCAGTAATGGAGTTGATGTT GATAGTCAGAGTTCATTGCCTGATAACAAGGTTAGGGTTCTATGGATTGATGGTGTCGAG AAGACGGAAGATATTGACAGCGTGGTTGTCATGGACAGAAGTTTCCTTCATGGAGATATA GTGGCTTCTGCCACAGATCCAACTGGTCAGATGGGACTTGTTGCTGATGTCAGCCTTGTG GTTGATTTGCAAGGACCTCACGGAGAAATAATAAAGGGAGTATCCTCTAAAGATTTGAGA CGCATCAGGGAATTTAACGTAGGTGATTATGTTGTCTCTGGGCCATGGCTTGGTCGAGTC GACGAGGTGTTGGATAATGTTAATGTGTTATTTGATGACGGCTCCGTCTGTAAAGTAGCC AGGGCAGATCCTATGCGGCTAAGGCCAGCATTGGGGCCACTGAATCCAAATGCAAGCTGT CCCTTTTATCCTGGACAGCGTGTCAAGGCAGTGAATTCATCTGTTTACAAAACATCCAGG TGGCTCAATGGACTATGGAAAGCAAGTCGTCTTGAAGGCACTGTCACAAAGGTGGAAACA GTTGCAGTTATAGTCTATTGGATTGCATCTGCACACTTTGCCACGAATCAAGAATCTGTT CCTCCTGAAGAGCAGAACCCAAAGGATCTGACTCTTTTATCTTGTTTTTCATATGCAAAT TGGCAATTAACTGATTGGTGTCTTCCTAACCAATACACATCATCGTGTACTGATGATTCT TTGATTGAAAGTTCAGAAATAAAAGACTCTGATGACATTCCTGAATCCAGTGATGTTAAG ACAGAACTAACGCAGAAGACTGATATGGATGAAAACCCTGGGAGGATGGATGGAGATTCT TCTGCTGATGGATCAAATATGGTTTATGAAGATAACACATGCTTAGCCAAACAATCAGAA TCAGGCACTATTGCATCAACCGTTCCAAAGGAGGGATCACAGGACAATGCAACTTACAGG AAAAAACTTAGGAAAGTTTTTGTCAAAAAGGATAAAAGAACAAGAAGAAGAGACGAGAGC TTTGAAAGGGCTCTGCTTATTGCAAATACATACACGAAGGTTGATGTGATCTGGCAAGAT GGGACAAAAGAATGTGGAGCAAGCTCAACATTGCTCATCCCGATCCACAGTCCAAATGAC CATGAATTCTTTCCGGAGCAGTATGTCGTGGACAAGGTTGGTAATGATGTTGATGATTCT TCTGAAACAAAACGTGTGGGTCTTGTTAGAAGTGTTAATGCAAAGGACCGAACTGCATCT GTATCATGGTTTAAGCCTTCATTACACCCAGAGGAGCCCAGAGAAATCGAGTGCAATGAA ATTGTGAGTGCATATGAATTGGATGGCCATCCAGATTATGATTATTGCTATGGAGATGTT GTTGTTCGCTTGCCATCTGTTTCACTGCCTGTTGAATCAACCAATAGGGAGAACACCATG GAACTGGATAATGTAAATTCTACAGAAGTATCGGCAACCCCTGTAGCTGATGCAGAGGAA CAGTTTCCACAGAAGGAATCCAGTTTGGAATTTACTAGCCTTTCATGGGCTGGTAATATA GTTGGTTTTGAAGACGGTGATATTATAGTCATTTGGGGCGATGGTTCAGTGTCAAAGGTT GGTCCACATGAAATATATGTTGTTGGTCGTGAAGATGATGGTGCCTCACTAGATGATGGA ACTGCCAGTGATGGTGCTAGCTGGGAGACTGTTGATGACAATCAAACGGATTTGCCTGAT GATTCTGCACAGGATGATTCGCAAAATGTAGCAGATAGTAACATCGAAAGGGAAAACGGT TCATTTAATTCGCAGGATGGAAGCTCTGTTGCAACTGGTCCACTTTCTGTTGCTTTTGGC TTTGTGACTCGGCTCGCGAGTGAACTCTTTGCTCGAGAATCTGGTGATGATATTGATAAA GCTGAGGGGGAGAACAATGTGGCAACATCTGAGAGTACCGTTGTAACAACAAATGACGCT TCCGGTGGGAAGTCTGTAGATGTTGATATGGCTGACAAGCCTGGAGATTCAGATGGCTTC AAACACTTTGATGTTCAGCAGTGCCCTCCAGACCATCATTACCTGGAAAACATGGCGCAG GGCACTGGTGGAAGAAAGTGGGTAAAAAAGGTACAGCAGGAATGGAACATACTTGAGAAA AATCTACCAGATTATATTTATGTTAGGGTATTTGAGGATCGAATGGACCTCATAAGAGCC GTGATTATTGGAGCAAGTGGAACACCATACCAAGATGGTCTTTTCTTCTTCGACTTCCAC CTTCCACCTGAGTTTCCACAAGTTCCTCCGTCGGCGTACTATCATTCTGGAGGTTTGCGC GTAAATCCAAACCTGTATGTGGATGGGAAGGTCTGCTTAAGTCTCTTGAATACCTGGACG GGCAGAGGGAATGAAGTATGGGATCCATCATCATCCAGTATTCTCCAAGTCCTGGTTTCA CTTCAGGGCTTGGTTCTAAATGAAAAGCCTTATTTTAATGAAGCTGGCTATGAGAAGCAA GTTGGTACTGTTGAAGGGGAGAAGAATGCATTGCCATATAATGAGAACACATATCTGCTG AGCTTGAAATCCATGTTGTATATCCTGAGGCGACCTCCAATGCATTTCGAGGACTTTGCA AAGAGCCACTTCTCCAAGCGTGGCAAATACATTCTCAAAGCTTGTGAGGCCTATTTGCAA GGTAATGGGGTTGGGACGCTCACAGATGATGCCTGCACCACCGAGAGAAGCAAAGAACAG CCATGCTCGGTGGGTTTCAAACTCGCATTAGCAAAAATTATGCCACGGTTGATTACTGCC CTGAAGGACGCTGGAGCAAATTGTGACCAATATGAGCACCTTGGGAAAACGGAAACTGCT CAAGAACACTGA

Peptide Sequence

PEP ID	Os01t0125900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:1421693:1427650:1 gene:Os01g0125900 transcript:Os01t0125900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UBIQUITIN-CONJUGATING ENZYME 34 description:Ubiquitin-conjugating enzyme/RWD-like domain containing protein. (Os01t0125900-01)
Sequence	MENLPNGSANIAEKNQDNEMSTDAGEPEEVADIFIYREDVVSLKSKEDTRGLVLEVAGEY DSEGSITDDDTDTEEHEHKSSHRTENGGADGDNVSNGVDVDSQSSLPDNKVRVLWIDGVE KTEDIDSVVVMDRSFLHGDIVASATDPTGQMGLVADVSLVVDLQGPHGEIIKGVSSKDLR RIREFNVGDYVVSGPWLGRVDEVLDNVNVLFDDGSVCKVARADPMRLRPALGPLNPNASC PFYPGQRVKAVNSSVYKTSRWLNGLWKASRLEGTVTKVETVAVIVYWIASAHFATNQESV PPEEQNPKDLTLLSCFSYANWQLTDWCLPNQYTSSCTDDSLIESSEIKDSDDIPESSDVK TELTQKTDMDENPGRMDGDSSADGSNMVYEDNTCLAKQSESGTIASTVPKEGSQDNATYR KKLRKVFVKKDKRTRRRDESFERALLIANTYTKVDVIWQDGTKECGASSTLLIPIHSPND HEFFPEQYVVDKVGNDVDDSSETKRVGLVRSVNAKDRTASVSWFKPSLHPEEPREIECNE IVSAYELDGHPDYDYCYGDVVVRLPSVSLPVESTNRENTMELDNVNSTEVSATPVADAEE QFPQKESSLEFTSLSWAGNIVGFEDGDIIVIWGDGSVSKVGPHEIYVVGREDDGASLDDG TASDGASWETVDDNQTDLPDDSAQDDSQNVADSNIERENGSFNSQDGSSVATGPLSVAFG FVTRLASELFARESGDDIDKAEGENNVATSESTVVTTNDASGGKSVDVDMADKPGDSDGF KHFDVQQCPPDHHYLENMAQGTGGRKWVKKVQQEWNILEKNLPDYIYVRVFEDRMDLIRA VIIGASGTPYQDGLFFFDFHLPPEFPQVPPSAYYHSGGLRVNPNLYVDGKVCLSLLNTWT GRGNEVWDPSSSSILQVLVSLQGLVLNEKPYFNEAGYEKQVGTVEGEKNALPYNENTYLL SLKSMLYILRRPPMHFEDFAKSHFSKRGKYILKACEAYLQGNGVGTLTDDACTTERSKEQ PCSVGFKLALAKIMPRLITALKDAGANCDQYEHLGKTETAQEH

Transcript Sequence

Transcript ID	Os01t0125900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:1421693:1427650:1 gene:Os01g0125900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UBIQUITIN-CONJUGATING ENZYME 34 description:Ubiquitin-conjugating enzyme/RWD-like domain containing protein. (Os01t0125900-01)
Sequence	GGTGGTCTCTCTCTCTCTCTCTTCTCTCGCCTCACTTCGCATCGCCTCCACCACCACGGT TCGGCTCGGCTCGGCTACTCCTCTCTCTCTCTTTCTCTCCCCTCCTCTCACCTAGGGCAC GCGCGCCGCCGCCGCCGCCGCCTCCCTCCTCCTCCCCGCGCGATCCCGCCGCCCCCCGAT CGACCCCGCCCCCCGATCGCCCGAGTAAAATATAGGGCTTCACGATTGCTGGGAATCTAC CTGCATAGCTTAGTTCAAACATGGAAAATCTACCAAATGGCTCAGCAAATATAGCTGAGA AGAACCAGGATAATGAGATGTCTACAGATGCTGGTGAGCCTGAAGAAGTAGCAGATATAT TTATTTATAGAGAAGATGTTGTCAGCTTGAAGTCAAAAGAGGACACCCGTGGGTTGGTTT TGGAGGTAGCAGGAGAATATGATTCTGAAGGTAGCATCACTGATGATGATACTGATACTG AGGAGCATGAACACAAAAGTTCTCATAGGACTGAAAATGGTGGTGCTGATGGTGATAATG TCAGTAATGGAGTTGATGTTGATAGTCAGAGTTCATTGCCTGATAACAAGGTTAGGGTTC TATGGATTGATGGTGTCGAGAAGACGGAAGATATTGACAGCGTGGTTGTCATGGACAGAA GTTTCCTTCATGGAGATATAGTGGCTTCTGCCACAGATCCAACTGGTCAGATGGGACTTG TTGCTGATGTCAGCCTTGTGGTTGATTTGCAAGGACCTCACGGAGAAATAATAAAGGGAG TATCCTCTAAAGATTTGAGACGCATCAGGGAATTTAACGTAGGTGATTATGTTGTCTCTG GGCCATGGCTTGGTCGAGTCGACGAGGTGTTGGATAATGTTAATGTGTTATTTGATGACG GCTCCGTCTGTAAAGTAGCCAGGGCAGATCCTATGCGGCTAAGGCCAGCATTGGGGCCAC TGAATCCAAATGCAAGCTGTCCCTTTTATCCTGGACAGCGTGTCAAGGCAGTGAATTCAT CTGTTTACAAAACATCCAGGTGGCTCAATGGACTATGGAAAGCAAGTCGTCTTGAAGGCA CTGTCACAAAGGTGGAAACAGTTGCAGTTATAGTCTATTGGATTGCATCTGCACACTTTG CCACGAATCAAGAATCTGTTCCTCCTGAAGAGCAGAACCCAAAGGATCTGACTCTTTTAT CTTGTTTTTCATATGCAAATTGGCAATTAACTGATTGGTGTCTTCCTAACCAATACACAT CATCGTGTACTGATGATTCTTTGATTGAAAGTTCAGAAATAAAAGACTCTGATGACATTC CTGAATCCAGTGATGTTAAGACAGAACTAACGCAGAAGACTGATATGGATGAAAACCCTG GGAGGATGGATGGAGATTCTTCTGCTGATGGATCAAATATGGTTTATGAAGATAACACAT GCTTAGCCAAACAATCAGAATCAGGCACTATTGCATCAACCGTTCCAAAGGAGGGATCAC AGGACAATGCAACTTACAGGAAAAAACTTAGGAAAGTTTTTGTCAAAAAGGATAAAAGAA CAAGAAGAAGAGACGAGAGCTTTGAAAGGGCTCTGCTTATTGCAAATACATACACGAAGG TTGATGTGATCTGGCAAGATGGGACAAAAGAATGTGGAGCAAGCTCAACATTGCTCATCC CGATCCACAGTCCAAATGACCATGAATTCTTTCCGGAGCAGTATGTCGTGGACAAGGTTG GTAATGATGTTGATGATTCTTCTGAAACAAAACGTGTGGGTCTTGTTAGAAGTGTTAATG CAAAGGACCGAACTGCATCTGTATCATGGTTTAAGCCTTCATTACACCCAGAGGAGCCCA GAGAAATCGAGTGCAATGAAATTGTGAGTGCATATGAATTGGATGGCCATCCAGATTATG ATTATTGCTATGGAGATGTTGTTGTTCGCTTGCCATCTGTTTCACTGCCTGTTGAATCAA CCAATAGGGAGAACACCATGGAACTGGATAATGTAAATTCTACAGAAGTATCGGCAACCC CTGTAGCTGATGCAGAGGAACAGTTTCCACAGAAGGAATCCAGTTTGGAATTTACTAGCC TTTCATGGGCTGGTAATATAGTTGGTTTTGAAGACGGTGATATTATAGTCATTTGGGGCG ATGGTTCAGTGTCAAAGGTTGGTCCACATGAAATATATGTTGTTGGTCGTGAAGATGATG GTGCCTCACTAGATGATGGAACTGCCAGTGATGGTGCTAGCTGGGAGACTGTTGATGACA ATCAAACGGATTTGCCTGATGATTCTGCACAGGATGATTCGCAAAATGTAGCAGATAGTA ACATCGAAAGGGAAAACGGTTCATTTAATTCGCAGGATGGAAGCTCTGTTGCAACTGGTC CACTTTCTGTTGCTTTTGGCTTTGTGACTCGGCTCGCGAGTGAACTCTTTGCTCGAGAAT CTGGTGATGATATTGATAAAGCTGAGGGGGAGAACAATGTGGCAACATCTGAGAGTACCG TTGTAACAACAAATGACGCTTCCGGTGGGAAGTCTGTAGATGTTGATATGGCTGACAAGC CTGGAGATTCAGATGGCTTCAAACACTTTGATGTTCAGCAGTGCCCTCCAGACCATCATT ACCTGGAAAACATGGCGCAGGGCACTGGTGGAAGAAAGTGGGTAAAAAAGGTACAGCAGG AATGGAACATACTTGAGAAAAATCTACCAGATTATATTTATGTTAGGGTATTTGAGGATC GAATGGACCTCATAAGAGCCGTGATTATTGGAGCAAGTGGAACACCATACCAAGATGGTC TTTTCTTCTTCGACTTCCACCTTCCACCTGAGTTTCCACAAGTTCCTCCGTCGGCGTACT ATCATTCTGGAGGTTTGCGCGTAAATCCAAACCTGTATGTGGATGGGAAGGTCTGCTTAA GTCTCTTGAATACCTGGACGGGCAGAGGGAATGAAGTATGGGATCCATCATCATCCAGTA TTCTCCAAGTCCTGGTTTCACTTCAGGGCTTGGTTCTAAATGAAAAGCCTTATTTTAATG AAGCTGGCTATGAGAAGCAAGTTGGTACTGTTGAAGGGGAGAAGAATGCATTGCCATATA ATGAGAACACATATCTGCTGAGCTTGAAATCCATGTTGTATATCCTGAGGCGACCTCCAA TGCATTTCGAGGACTTTGCAAAGAGCCACTTCTCCAAGCGTGGCAAATACATTCTCAAAG CTTGTGAGGCCTATTTGCAAGGTAATGGGGTTGGGACGCTCACAGATGATGCCTGCACCA CCGAGAGAAGCAAAGAACAGCCATGCTCGGTGGGTTTCAAACTCGCATTAGCAAAAATTA TGCCACGGTTGATTACTGCCCTGAAGGACGCTGGAGCAAATTGTGACCAATATGAGCACC TTGGGAAAACGGAAACTGCTCAAGAACACTGAATGACTTGTATGGATATCATTTTTTGGT TTCAGAAAGATGATCACCTCACCTGCTGTTTTTCGTATAAATGTACATTACATTTGTTTC TTGTTTCTATTTAAACATTTG