Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0124200-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:1347665:1348723:-1 gene:Os01g0124200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BOWMAN-BIRK INHIBITOR 3-1 description:Similar to Bowman Birk trypsin inhibitor. (Os01t0124200-02)
Sequence

ATGAGCAACACCACCATGGCTATTTCCACCATCCTTCTCTTCCTCCTCGCCGGCCTCGTC
GCCGCCCACGGCGACGGCGACACCATGATCCGTCTCCCAAGCGACGGCGCCGAAGCACCA
CCACGCCCGCCCAAACCCTGGGACTGCTGCGACAACATCGAGATGTCCCCGCTCGAGATC
TTCCCGCCGCTGTACCGCTGCAACGACGAGGTGAAGCAGTGCTCCGCCGCCTGCAAGGAG
TGCGTGGAGGCGCCCGGCGACTTCCCCCGCGGCGCCTTCGTGTGCCGCGACTGGTACTCG
ACGGTGGACCCGGGCCACATGTGCACGGCGCCGGATCAGCCGACGACGAAGAGGCCGTGG
AAGTGCTGTGACAGCATCGTGCAGCTGCCGCAGAGGATCTTCCCGCCGTTCTGGCGCTGC
GACGACGAGCTGGAGCCCGGCAAGTGCACCGCCGCGTGCAAGTCGTGCAGGGAGGCGCCG
GGGCCGTTCCCGGGGCCGCTCATCTGCGAGGACGTCTACTGGGGCGCCGACCCGGGCCCC
TTGTGCACGCCGCGGCCATGGGGGAAATGCTGCGACAAGGCCTTCTGCAACAAGATGAAC
CCGCCGACCTGCCGCTGCATGGACGAGGTGAACAAGTGCGCCGCCGCGTGCAAGGATTGC
CAGCGTGTGGAGTCGTCAGAGCCGCCTCGCTACGTCTGCAAGGACCGCTTCACCGGCCAG
CCCGGGCCCATGTGCAAACCCCGAGCGGAGAACTAG

Peptide Sequence

PEP ID

Os01t0124200-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:1347665:1348723:-1 gene:Os01g0124200 transcript:Os01t0124200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BOWMAN-BIRK INHIBITOR 3-1 description:Similar to Bowman Birk trypsin inhibitor. (Os01t0124200-02)
Sequence

MSNTTMAISTILLFLLAGLVAAHGDGDTMIRLPSDGAEAPPRPPKPWDCCDNIEMSPLEI
FPPLYRCNDEVKQCSAACKECVEAPGDFPRGAFVCRDWYSTVDPGHMCTAPDQPTTKRPW
KCCDSIVQLPQRIFPPFWRCDDELEPGKCTAACKSCREAPGPFPGPLICEDVYWGADPGP
LCTPRPWGKCCDKAFCNKMNPPTCRCMDEVNKCAAACKDCQRVESSEPPRYVCKDRFTGQ
PGPMCKPRAEN

Transcript Sequence

Transcript ID

Os01t0124200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:1347665:1348723:-1 gene:Os01g0124200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BOWMAN-BIRK INHIBITOR 3-1 description:Similar to Bowman Birk trypsin inhibitor. (Os01t0124200-02)
Sequence

ATCACAAGCACCCACACCAACCAAAGATGAGCAACACCACCATGGCTATTTCCACCATCC
TTCTCTTCCTCCTCGCCGGCCTCGTCGCCGCCCACGGCGACGGCGACACCATGATCCGTC
TCCCAAGCGACGGCGCCGAAGCACCACCACGCCCGCCCAAACCCTGGGACTGCTGCGACA
ACATCGAGATGTCCCCGCTCGAGATCTTCCCGCCGCTGTACCGCTGCAACGACGAGGTGA
AGCAGTGCTCCGCCGCCTGCAAGGAGTGCGTGGAGGCGCCCGGCGACTTCCCCCGCGGCG
CCTTCGTGTGCCGCGACTGGTACTCGACGGTGGACCCGGGCCACATGTGCACGGCGCCGG
ATCAGCCGACGACGAAGAGGCCGTGGAAGTGCTGTGACAGCATCGTGCAGCTGCCGCAGA
GGATCTTCCCGCCGTTCTGGCGCTGCGACGACGAGCTGGAGCCCGGCAAGTGCACCGCCG
CGTGCAAGTCGTGCAGGGAGGCGCCGGGGCCGTTCCCGGGGCCGCTCATCTGCGAGGACG
TCTACTGGGGCGCCGACCCGGGCCCCTTGTGCACGCCGCGGCCATGGGGGAAATGCTGCG
ACAAGGCCTTCTGCAACAAGATGAACCCGCCGACCTGCCGCTGCATGGACGAGGTGAACA
AGTGCGCCGCCGCGTGCAAGGATTGCCAGCGTGTGGAGTCGTCAGAGCCGCCTCGCTACG
TCTGCAAGGACCGCTTCACCGGCCAGCCCGGGCCCATGTGCAAACCCCGAGCGGAGAACT
AGCTAGCTACAGATGATCGATGATCGATCTGTGTGTCCATCAATAAAACTCGCCCTAGCT
TGCAGCTAGCTGATCGTTCGTTCGATCATTCAGAGTTGGTATAGCTAGAGGCTAGAGCTT
AGCTCCATCCAGATTTTTCAGTGCTCTGCAGCTTTTGTGCATCTTGCATGCTTTGTTAGT
TTGTGTGCTCCATGTGTGTGGGTGTGTTTAATTTGTCCCTGTTCGCTTGTGTGGACCAAG
AGGGAAAATAAAATATATATGCAACGCAAGCATGCACCC