Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0124100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:1345118:1346047:-1 gene:Os01g0124100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BOWMAN-BIRK INHIBITOR 3-2 description:Proteinase inhibitor I12, Bowman-Birk family protein. (Os01t0124100-01)
Sequence

ATGAGTAACAACAGCATGGCTACTTCCACCATCCTGCTCTTCCTCCTCGCCGTCGGCGGC
CTCGCCGCCGCCCACGGCGACACCATCCGTCTCCCCAGCGAAGGCGACGCACCACCGCAG
CCCGCCAAACCCTGGGACTGCTGCGACGATATCGAGATGTCCCCGCTAAAGATCTTCCCG
CCGCTTTACCGCTGCAACGACGAGGTCAAGCAGTGCTCGGCCGCCTGCAAGGAGTGCGTG
GCGGCGCCGGCGGCCGGAGACTCCCCCTGCGGCGGCGGCGCCGCCCTCGTCTGCCGCGAC
TGGTACTCGACGGAGGACCCCGGCAAGCCGTGCACGCCGGAGCGGGAATGGCCGGAGCGG
ACGACGAAGAAGAGGCCGTGGAAGTGCTGCGACAACATCCGGCGGCTGCCGCCGAGGATC
CACCCGCCGTTCTGGCGCTGCGACGACGAGCTCAAGCCCGGCCAGTGCTTCGCCGCGTGC
AAGGCTTGCCGGGAGGCGCCGGGGCCATTCCCGGGGCCGCTCATCTGCGACGACGTCTAC
TGGGGCGCCGACCCGGGTCCCTTCTGCACGCCGCGGCCGTGGGGGGATTGCTGCGACAAC
ACCACCTGCACCAAGTCGATCCCTCCAATCTGCAGCTGCGGCGACAAGGTGGCGGCATGC
GACGGCGCGTGCAAGGATTGCCAGCCGGTGGCGTCGTCGTCGGAGCCGCCTCGCTTCGTC
TGCAAGGATCAGTTCACCGGACAGCCAGGGCCCAAGTGCACACCATGCACTCAGAACTGA

Peptide Sequence

PEP ID

Os01t0124100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:1345118:1346047:-1 gene:Os01g0124100 transcript:Os01t0124100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BOWMAN-BIRK INHIBITOR 3-2 description:Proteinase inhibitor I12, Bowman-Birk family protein. (Os01t0124100-01)
Sequence

MSNNSMATSTILLFLLAVGGLAAAHGDTIRLPSEGDAPPQPAKPWDCCDDIEMSPLKIFP
PLYRCNDEVKQCSAACKECVAAPAAGDSPCGGGAALVCRDWYSTEDPGKPCTPEREWPER
TTKKRPWKCCDNIRRLPPRIHPPFWRCDDELKPGQCFAACKACREAPGPFPGPLICDDVY
WGADPGPFCTPRPWGDCCDNTTCTKSIPPICSCGDKVAACDGACKDCQPVASSSEPPRFV
CKDQFTGQPGPKCTPCTQN

Transcript Sequence

Transcript ID

Os01t0124100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:1345118:1346047:-1 gene:Os01g0124100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BOWMAN-BIRK INHIBITOR 3-2 description:Proteinase inhibitor I12, Bowman-Birk family protein. (Os01t0124100-01)
Sequence

AGCACAACACCACAAACCAAGATGAGTAACAACAGCATGGCTACTTCCACCATCCTGCTC
TTCCTCCTCGCCGTCGGCGGCCTCGCCGCCGCCCACGGCGACACCATCCGTCTCCCCAGC
GAAGGCGACGCACCACCGCAGCCCGCCAAACCCTGGGACTGCTGCGACGATATCGAGATG
TCCCCGCTAAAGATCTTCCCGCCGCTTTACCGCTGCAACGACGAGGTCAAGCAGTGCTCG
GCCGCCTGCAAGGAGTGCGTGGCGGCGCCGGCGGCCGGAGACTCCCCCTGCGGCGGCGGC
GCCGCCCTCGTCTGCCGCGACTGGTACTCGACGGAGGACCCCGGCAAGCCGTGCACGCCG
GAGCGGGAATGGCCGGAGCGGACGACGAAGAAGAGGCCGTGGAAGTGCTGCGACAACATC
CGGCGGCTGCCGCCGAGGATCCACCCGCCGTTCTGGCGCTGCGACGACGAGCTCAAGCCC
GGCCAGTGCTTCGCCGCGTGCAAGGCTTGCCGGGAGGCGCCGGGGCCATTCCCGGGGCCG
CTCATCTGCGACGACGTCTACTGGGGCGCCGACCCGGGTCCCTTCTGCACGCCGCGGCCG
TGGGGGGATTGCTGCGACAACACCACCTGCACCAAGTCGATCCCTCCAATCTGCAGCTGC
GGCGACAAGGTGGCGGCATGCGACGGCGCGTGCAAGGATTGCCAGCCGGTGGCGTCGTCG
TCGGAGCCGCCTCGCTTCGTCTGCAAGGATCAGTTCACCGGACAGCCAGGGCCCAAGTGC
ACACCATGCACTCAGAACTGATCCTTGCAGATATGATCGATGTCCGTCAATAACTCCAGA
CCAAGCAGAAGTACTTGATCGTTCGTTCGATCATCCAGAGTTGCTATAGTCTATATTCTC
TCTGGTTTCATTTTAATTGACGTTTTGAAC