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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0124000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:1341368:1342277:-1 gene:Os01g0124000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BOWMAN-BIRK INHIBITOR 2-1 description:Similar to Bowman Birk trypsin inhibitor. (Os01t0124000-01)
Sequence

ATGACCATGAAAGTGAAGAGCACCATGATGGCTGCTTCCATGCTGCTCTTCCTCCTCGTC
CTCGCCGGCATCGTCACCGCCACCACCACCACCACCGACAGCAACATTCGCCTCCCCAGC
AACGGCGCCGCCGGCGAAACCGATGGAAACAAACAGGCGAAATCCAGACCGTGGGAGTGC
TGCGACAACATCGAGATGTCCGTGCTCAAGATCTACCCGCCGCGGTGGCGTTGCAACGAC
GAGGTGAAGCAGTGCGCCGCCGCCTGCGAGAACTGCCTGCAGCTGGTGCCCGGGGCCGGC
GGCGAAGATGTCGTCTTCGTCTGCGACGACTGGTACCCGACCACCAACCCTGGCCCCGTC
TGCACGCCGCGGCCGTGGGGCGATTGCTGCGACAAGGCCTTCTGCACCAGGTCTCTCCCA
CCGATCTGCCACTGCGCCGACGAGGTGGCGTCGTGCGCCGCCGCCTGCAAGGAGTGCGAC
ATGGTGAATTCGTCGTCGGAGCCGCCTCGCTATATCTGCCGCGACCACTTCACCGGCGAG
CCCGGGCCCATGTGCGCATGA

Peptide Sequence

PEP ID

Os01t0124000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:1341368:1342277:-1 gene:Os01g0124000 transcript:Os01t0124000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BOWMAN-BIRK INHIBITOR 2-1 description:Similar to Bowman Birk trypsin inhibitor. (Os01t0124000-01)
Sequence

MTMKVKSTMMAASMLLFLLVLAGIVTATTTTTDSNIRLPSNGAAGETDGNKQAKSRPWEC
CDNIEMSVLKIYPPRWRCNDEVKQCAAACENCLQLVPGAGGEDVVFVCDDWYPTTNPGPV
CTPRPWGDCCDKAFCTRSLPPICHCADEVASCAAACKECDMVNSSSEPPRYICRDHFTGE
PGPMCA

Transcript Sequence

Transcript ID

Os01t0124000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:1341368:1342277:-1 gene:Os01g0124000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BOWMAN-BIRK INHIBITOR 2-1 description:Similar to Bowman Birk trypsin inhibitor. (Os01t0124000-01)
Sequence

GATAAATAACACCCCATGCATGCATTTCACCATGACCAAACCACGCCTAAACCTAGCTAG
CTAATAAGCTCCAAGGCTCCAAGCAAAGTAATTAAGATGACCATGAAAGTGAAGAGCACC
ATGATGGCTGCTTCCATGCTGCTCTTCCTCCTCGTCCTCGCCGGCATCGTCACCGCCACC
ACCACCACCACCGACAGCAACATTCGCCTCCCCAGCAACGGCGCCGCCGGCGAAACCGAT
GGAAACAAACAGGCGAAATCCAGACCGTGGGAGTGCTGCGACAACATCGAGATGTCCGTG
CTCAAGATCTACCCGCCGCGGTGGCGTTGCAACGACGAGGTGAAGCAGTGCGCCGCCGCC
TGCGAGAACTGCCTGCAGCTGGTGCCCGGGGCCGGCGGCGAAGATGTCGTCTTCGTCTGC
GACGACTGGTACCCGACCACCAACCCTGGCCCCGTCTGCACGCCGCGGCCGTGGGGCGAT
TGCTGCGACAAGGCCTTCTGCACCAGGTCTCTCCCACCGATCTGCCACTGCGCCGACGAG
GTGGCGTCGTGCGCCGCCGCCTGCAAGGAGTGCGACATGGTGAATTCGTCGTCGGAGCCG
CCTCGCTATATCTGCCGCGACCACTTCACCGGCGAGCCCGGGCCCATGTGCGCATGAACT
GATTAACTATAGCTAGCTATATCAAGCTAGCTGATTATATTGATCCTTTCACCAATAAAT
ATATGTTCGCGTCGTTCGCGATCGATCGAACGATCAGTCTGCGTGTGTTCTAGCTTGTTC
GTATTCGTACATACGTACGTGTGTACAATTTGTCTGTGTGTTGTGTCTATCGTGTGGTTT
GATGTTGGTATGCGTGTTATGTCATGTGTTACGAAGTTATCATGATAAATAAAAGACGAA
TGAGAGATCT