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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0123900-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:1338241:1339098:-1 gene:Os01g0123900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BOWMAN-BIRK INHIBITOR 2-2 description:Similar to Bowman-Birk type proteinase inhibitor (EBI). (Os01t0123900-01)
Sequence

ATGAAGATGAAGCGCACCATGGCTGCTACTTCCATCCTGTTCTTCTTCCTCGCCGGCCTC
GCCGCCGCCCACGGCAGCACAGCGGACGACACCACGACCACCACCACCAACACCATACGC
CTCCCGATCGACGGAGCAGTGGCGGCGCGAAGGAGGACGAGGCCGTGGAAGTGCTGCGAC
AACATCGTGAGGCTGCCGGAGAGGATCAACCCGCCGTTCTGGCAGTGCGACGACGAGCTG
GAGCCCGGGCAGTGCTTCCGCCAGTGCGAGGCGTGCCGGGATCCGCCGGGGCGGCCGTTC
CCCGGCCGGCCGCTCATCTGCGACGACGTCTTCTGGGGCGACGACCCGGGCACCTCGTGC
GCGCCGTCGTCGGAGTGGCCGTGGGGCCCGTGCTGCGACATCGCCGTCTGCACCAAGTCG
CTCCCTCCCATCTGCCACTGCTCCGACGAGGTGGAGTCGTGCGCCGCCGCGTGCGGGCAG
TGCGAGATGGTGGACTCGTGGTCGTGGCGCCCTCTCTTCGTCTGCCGTGACTCCTTCACC
GGGGACCCAGGCCCCAGGTGCACACCTGAAATGCACAACTAA

Peptide Sequence

PEP ID

Os01t0123900-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:1338241:1339098:-1 gene:Os01g0123900 transcript:Os01t0123900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BOWMAN-BIRK INHIBITOR 2-2 description:Similar to Bowman-Birk type proteinase inhibitor (EBI). (Os01t0123900-01)
Sequence

MKMKRTMAATSILFFFLAGLAAAHGSTADDTTTTTTNTIRLPIDGAVAARRRTRPWKCCD
NIVRLPERINPPFWQCDDELEPGQCFRQCEACRDPPGRPFPGRPLICDDVFWGDDPGTSC
APSSEWPWGPCCDIAVCTKSLPPICHCSDEVESCAAACGQCEMVDSWSWRPLFVCRDSFT
GDPGPRCTPEMHN

Transcript Sequence

Transcript ID

Os01t0123900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:1338241:1339098:-1 gene:Os01g0123900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BOWMAN-BIRK INHIBITOR 2-2 description:Similar to Bowman-Birk type proteinase inhibitor (EBI). (Os01t0123900-01)
Sequence

ATCTCAAAGCAAGCAAGACGTCCATGAAGATGAAGCGCACCATGGCTGCTACTTCCATCC
TGTTCTTCTTCCTCGCCGGCCTCGCCGCCGCCCACGGCAGCACAGCGGACGACACCACGA
CCACCACCACCAACACCATACGCCTCCCGATCGACGGAGCAGTGGCGGCGCGAAGGAGGA
CGAGGCCGTGGAAGTGCTGCGACAACATCGTGAGGCTGCCGGAGAGGATCAACCCGCCGT
TCTGGCAGTGCGACGACGAGCTGGAGCCCGGGCAGTGCTTCCGCCAGTGCGAGGCGTGCC
GGGATCCGCCGGGGCGGCCGTTCCCCGGCCGGCCGCTCATCTGCGACGACGTCTTCTGGG
GCGACGACCCGGGCACCTCGTGCGCGCCGTCGTCGGAGTGGCCGTGGGGCCCGTGCTGCG
ACATCGCCGTCTGCACCAAGTCGCTCCCTCCCATCTGCCACTGCTCCGACGAGGTGGAGT
CGTGCGCCGCCGCGTGCGGGCAGTGCGAGATGGTGGACTCGTGGTCGTGGCGCCCTCTCT
TCGTCTGCCGTGACTCCTTCACCGGGGACCCAGGCCCCAGGTGCACACCTGAAATGCACA
ACTAAGAAGAGAACTACTTCTCTGTATAACAAGCAGAGAGGCTCATCGTACGTATTCTCT
GCTAGCTTGAACATGTCTCTGTGTTCATGTACGTGTTGGTATATGCATAGCTTGAACATG
TCTCTTTGTGTTCATATACGTGTTGGTATGTATGCATAGCTTGAACATGTCTCTGTGTTG
GTATGCCAACATGCATCTTGTCTTTGTGATGATGCATAAATAAATGAATAAAAGATAAAT
AAGAGATGAGATCTACCC