Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0121300-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:1198687:1203502:-1 gene:Os01g0121300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0121300-01)
Sequence

ATGGGAAGAAGGGGCGCGGGCGCGGGCGCTGCGGTGGTGGTGGTCGCGGCCTTCGTGGCG
GCGGCCGTGGCGTCGGGGGACACGCTCGCCGATCTCGGCGGCGCCGCCAAGGGGATCGAC
AGCGTGCCAGAAGTGAATAACTTGGGACCATGGGCGAAGGGGCTTCTGAAAGGGATGCCG
GACTCGGCGGCAGGGCCAGCAGAGGGCCCCATCGCAAAGTATCCGCTGGTTCTGGCAGAG
GAGAGGACGCGGCGGCCGGATGTTCTTGACCACCTTAGGATGTATGGAGGAGGGTGGAAC
ATCACTAACAAGCACTATTGGGCGTCTGTTTCATTCACAGGAATTGCTGGGTTTGTTCTT
GCTGCTGGGTGGTTTATTTCGTTTGGAATTGCTGTAGCTGCAAGCTGCTTTTGGAAATCA
AGAATAGACAAAGAAAATGATTTTCATGCAGATATACTGCGCCTTGTGTTGCTTGTGGTC
TTCATATTTACTTTAACGGCTGGATCTGTTATCCTCTTTTGTGGACAGAGTAAATTCGGA
CAAGAAGCTACTAGCACTGTCGATTTTGTTGTGAATCAATCTGATTTCACCATTCAGACG
CTAAGGAATGTTACCGATTACTTATCGCTTGCAAAGACAATCAGTGTGGCAGCACTCTAT
CTTCCTTCAGATGTACAAGGGCAAATTGACAATTTGAAAGTGGACTTAAATAAAGCGGCT
GATACTATATCCCAAAAGACATCAGAAAACTACAGAAGGATAAGAAAAGTTCTCCATAAC
TTGTCAGTTGCTTTGATTTGCATAGCTGCGTTGATGCCTGTTCTTGCATTCTTGGGATAT
GTTTTGGAGCTGTATGGACAAAGAAGTACAGTTTATGTATTTGTTACCTTATGCTGGACA
GTAGTGGCAACTCTCTTCATTCTTCTAGGGATTTTCCTGATATTGAACAGTGCTGCAAAG
GATACCTGTGAAGCAATGGATGAATGGGCACAACATCCTCAAGCAGAGACAGCTCTCAGC
AACATCCTTCCATGTGTAGATGAAAGCACAACCAATCAAACCTTGTACCAGAGTAAACAT
GTTGTGGTAATTCTTGTAGGCATAGTTAATAGGGCTATATCTGCTCTTTCAAATCGAAGG
CCACATCATAAACATCCTGGGCAGTTCATGCCTTACCTGTGTTCTCCCTATGATGCGAAC
CTGACTGATCGGCAGTGCAAGTCTAGGGAGGTCACCTTCGATAATGCAACCACAGCATGG
CTGAACTATACATGCACAGTTCCTGACTCAGATTTGTGCTCTGGCCCCAGAACCATAACT
CCAGAGATATACAGTCAGCTTGTTTTAGCTGCCAATGTAAGCTATGCTCTGTACCATTAT
GCCCCTCTCATGCTCAATCTCCAGGACTGCAAGTTCGTCCGCAACACATTCAGCTCCATC
GCTTCGCAGTACTGCCCTCCTATATGGCGCGACCTCAGCTTGGTCTCAGCAGGCCTGGCT
CTCATTGCCTCTGGCTTAACACTTGGCCTCCTCTTGATGCTTTTTGCGGACCGCCCCCAA
AGGGAGGAGGTGTCCGAGCTGCCATCAGGGTCAAGGATCACCCCAGTAGACTGCTCTCCA
TGA

Peptide Sequence

PEP ID

Os01t0121300-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:1198687:1203502:-1 gene:Os01g0121300 transcript:Os01t0121300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0121300-01)
Sequence

MGRRGAGAGAAVVVVAAFVAAAVASGDTLADLGGAAKGIDSVPEVNNLGPWAKGLLKGMP
DSAAGPAEGPIAKYPLVLAEERTRRPDVLDHLRMYGGGWNITNKHYWASVSFTGIAGFVL
AAGWFISFGIAVAASCFWKSRIDKENDFHADILRLVLLVVFIFTLTAGSVILFCGQSKFG
QEATSTVDFVVNQSDFTIQTLRNVTDYLSLAKTISVAALYLPSDVQGQIDNLKVDLNKAA
DTISQKTSENYRRIRKVLHNLSVALICIAALMPVLAFLGYVLELYGQRSTVYVFVTLCWT
VVATLFILLGIFLILNSAAKDTCEAMDEWAQHPQAETALSNILPCVDESTTNQTLYQSKH
VVVILVGIVNRAISALSNRRPHHKHPGQFMPYLCSPYDANLTDRQCKSREVTFDNATTAW
LNYTCTVPDSDLCSGPRTITPEIYSQLVLAANVSYALYHYAPLMLNLQDCKFVRNTFSSI
ASQYCPPIWRDLSLVSAGLALIASGLTLGLLLMLFADRPQREEVSELPSGSRITPVDCSP

Transcript Sequence

Transcript ID

Os01t0121300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:1198687:1203502:-1 gene:Os01g0121300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0121300-01)
Sequence

GACCGACGCCGCGGGCTTAGTCCAGTGGAAGGTGTTCGTCCACTCGCGCTCGCACTCCCG
CCGTTACGCGCGCGCGCGCCGCCGCCGCCCCGACCTCGCCGCGCGCGCCGACGAACCTAG
ATGCGGTGATGGGAAGAAGGGGCGCGGGCGCGGGCGCTGCGGTGGTGGTGGTCGCGGCCT
TCGTGGCGGCGGCCGTGGCGTCGGGGGACACGCTCGCCGATCTCGGCGGCGCCGCCAAGG
GGATCGACAGCGTGCCAGAAGTGAATAACTTGGGACCATGGGCGAAGGGGCTTCTGAAAG
GGATGCCGGACTCGGCGGCAGGGCCAGCAGAGGGCCCCATCGCAAAGTATCCGCTGGTTC
TGGCAGAGGAGAGGACGCGGCGGCCGGATGTTCTTGACCACCTTAGGATGTATGGAGGAG
GGTGGAACATCACTAACAAGCACTATTGGGCGTCTGTTTCATTCACAGGAATTGCTGGGT
TTGTTCTTGCTGCTGGGTGGTTTATTTCGTTTGGAATTGCTGTAGCTGCAAGCTGCTTTT
GGAAATCAAGAATAGACAAAGAAAATGATTTTCATGCAGATATACTGCGCCTTGTGTTGC
TTGTGGTCTTCATATTTACTTTAACGGCTGGATCTGTTATCCTCTTTTGTGGACAGAGTA
AATTCGGACAAGAAGCTACTAGCACTGTCGATTTTGTTGTGAATCAATCTGATTTCACCA
TTCAGACGCTAAGGAATGTTACCGATTACTTATCGCTTGCAAAGACAATCAGTGTGGCAG
CACTCTATCTTCCTTCAGATGTACAAGGGCAAATTGACAATTTGAAAGTGGACTTAAATA
AAGCGGCTGATACTATATCCCAAAAGACATCAGAAAACTACAGAAGGATAAGAAAAGTTC
TCCATAACTTGTCAGTTGCTTTGATTTGCATAGCTGCGTTGATGCCTGTTCTTGCATTCT
TGGGATATGTTTTGGAGCTGTATGGACAAAGAAGTACAGTTTATGTATTTGTTACCTTAT
GCTGGACAGTAGTGGCAACTCTCTTCATTCTTCTAGGGATTTTCCTGATATTGAACAGTG
CTGCAAAGGATACCTGTGAAGCAATGGATGAATGGGCACAACATCCTCAAGCAGAGACAG
CTCTCAGCAACATCCTTCCATGTGTAGATGAAAGCACAACCAATCAAACCTTGTACCAGA
GTAAACATGTTGTGGTAATTCTTGTAGGCATAGTTAATAGGGCTATATCTGCTCTTTCAA
ATCGAAGGCCACATCATAAACATCCTGGGCAGTTCATGCCTTACCTGTGTTCTCCCTATG
ATGCGAACCTGACTGATCGGCAGTGCAAGTCTAGGGAGGTCACCTTCGATAATGCAACCA
CAGCATGGCTGAACTATACATGCACAGTTCCTGACTCAGATTTGTGCTCTGGCCCCAGAA
CCATAACTCCAGAGATATACAGTCAGCTTGTTTTAGCTGCCAATGTAAGCTATGCTCTGT
ACCATTATGCCCCTCTCATGCTCAATCTCCAGGACTGCAAGTTCGTCCGCAACACATTCA
GCTCCATCGCTTCGCAGTACTGCCCTCCTATATGGCGCGACCTCAGCTTGGTCTCAGCAG
GCCTGGCTCTCATTGCCTCTGGCTTAACACTTGGCCTCCTCTTGATGCTTTTTGCGGACC
GCCCCCAAAGGGAGGAGGTGTCCGAGCTGCCATCAGGGTCAAGGATCACCCCAGTAGACT
GCTCTCCATGACGAGCTCAGTCTCTATGGTCATTCAGACTAGTATAGCAATTGCCTGTAA
TAGTTAGGAAAAGAAGAAGGTGAAGCACTGGGGCAAAGCCCCATTTTGCAGTGGAGATGA
TCTAGGTGGATGAGTGCTTCCTTCCGTGGTATACATGGTATGTTTCAGGGAATAGTTGTA
AAGGCTAATGCCTAATGGCAAACAAAATTTGGGCAAAACCCCACTATGATATGAAGAGCA
ATGTTCTGTATCCCCTATGATTGTTCAGCTGGACATGTTTCTTTCTTATGTACATGTCTT
GTTCTGTGTGTT