Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0121200-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:1186667:1191013:-1 gene:Os01g0121200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0121200-01)
Sequence

ATGGGCGACCATCTGGCATTGCTTGTGGATCGGCTGCTGACGGAGTCGACGCTGGACGCG
GCAATCAGGAAGCAGGTGGCCGATCTGCAGGCGGAGACGGTGGCGATCGACTACTGCTGC
GACGGCGACGGCGATGGCGGCTCGGCGAGGAAGATGGTGGAGTGCAGGATTTGCCAAGAG
GAGGATTGGGATACCAGCATGGAGGCACCCTGTGCTTGCTGTGGCAGCCTCAAGTATGCG
CACCGGAAATGCATTCAGCGTTGGTGCAATGAGAAAGGCGACACCGTTTGCGAAATATGT
TTGCAGCAATTCAAGCCTGGTTATACTGCCCCACAGCAACTGTTTCACTATGGAAGTATA
CCGATGAACTTCAGAGGAAATTGGGAGATTGCTAGGCAAGATCTCCATGATTCCCAGATA
ATAACAATGGTGCCATCGGAGCGCGACTTCATGGATGGTTATGAGGACTACTTACCCATT
AGGACGAGAAGCAGCACCCTGTGTTGCCGAACAGTCGCCATAATTTTCATGTCACTCCTG
GTTCTTCGCCACACTCTTCCTCTTATGATTGGTGGGGATGGGGAGTACTCGTTGGCCTTA
TTCTCGCTTCTTGTCTTGAGGACCGCCGGAATCCTATTTCCAATCTTGGTCATGGTGAGA
GCATTGGCAACCTTCCATCGTCGTCGTCGCCAGCAGGAAAGACGGGAAATGTATATGACT
TCGTCAGACAGCGAAGAGGAGGAGGATTATTCAGATACCGATCCTGCACAGCCAATTCAT
TCTCAGACACGCCTGGTACCAATCTACTGA

Peptide Sequence

PEP ID

Os01t0121200-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:1186667:1191013:-1 gene:Os01g0121200 transcript:Os01t0121200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0121200-01)
Sequence

MGDHLALLVDRLLTESTLDAAIRKQVADLQAETVAIDYCCDGDGDGGSARKMVECRICQE
EDWDTSMEAPCACCGSLKYAHRKCIQRWCNEKGDTVCEICLQQFKPGYTAPQQLFHYGSI
PMNFRGNWEIARQDLHDSQIITMVPSERDFMDGYEDYLPIRTRSSTLCCRTVAIIFMSLL
VLRHTLPLMIGGDGEYSLALFSLLVLRTAGILFPILVMVRALATFHRRRRQQERREMYMT
SSDSEEEEDYSDTDPAQPIHSQTRLVPIY

Transcript Sequence

Transcript ID

Os01t0121200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:1186667:1191013:-1 gene:Os01g0121200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0121200-01)
Sequence

CGTATTCCTCTCGAGCTTTGCGTTCTTGCAAGCAGGAAGATTTCAGCATGTCGTTGGAGT
CGTTGTACAGGCTGAATATCTTTACTGATGAGAAACTTCTGATCAGCTTGTGCCAGTAAG
AAGTGATTAATGGGCGACCATCTGGCATTGCTTGTGGATCGGCTGCTGACGGAGTCGACG
CTGGACGCGGCAATCAGGAAGCAGGTGGCCGATCTGCAGGCGGAGACGGTGGCGATCGAC
TACTGCTGCGACGGCGACGGCGATGGCGGCTCGGCGAGGAAGATGGTGGAGTGCAGGATT
TGCCAAGAGGAGGATTGGGATACCAGCATGGAGGCACCCTGTGCTTGCTGTGGCAGCCTC
AAGTATGCGCACCGGAAATGCATTCAGCGTTGGTGCAATGAGAAAGGCGACACCGTTTGC
GAAATATGTTTGCAGCAATTCAAGCCTGGTTATACTGCCCCACAGCAACTGTTTCACTAT
GGAAGTATACCGATGAACTTCAGAGGAAATTGGGAGATTGCTAGGCAAGATCTCCATGAT
TCCCAGATAATAACAATGGTGCCATCGGAGCGCGACTTCATGGATGGTTATGAGGACTAC
TTACCCATTAGGACGAGAAGCAGCACCCTGTGTTGCCGAACAGTCGCCATAATTTTCATG
TCACTCCTGGTTCTTCGCCACACTCTTCCTCTTATGATTGGTGGGGATGGGGAGTACTCG
TTGGCCTTATTCTCGCTTCTTGTCTTGAGGACCGCCGGAATCCTATTTCCAATCTTGGTC
ATGGTGAGAGCATTGGCAACCTTCCATCGTCGTCGTCGCCAGCAGGAAAGACGGGAAATG
TATATGACTTCGTCAGACAGCGAAGAGGAGGAGGATTATTCAGATACCGATCCTGCACAG
CCAATTCATTCTCAGACACGCCTGGTACCAATCTACTGACACGATCAAGAACGATGCCAA
AAAAATTCAAAAAAAGAAGAAAAAAAGAAGAGGAAGGTGACCATATGTGACATAGTAAAT
GAAGATAGTTTGAAGCCACTCGCTTCAAGGTGCCCTTGCAAGAATGTAGTGGCTCTGTAC
ATATGAGAAAGGAACAGATCGCTAACTAACCCAAGATGCTGTAACTTGAGCTTCTCTAGT
ACTGCAAGCAAGTTCAGCTACCCACTATAAGTATTGAAAAGGTTGTTATTATTCAGATTA
CTTGCAAATGGAAGGAAATACACGTCGTTTTCTGGATCCATCCACTTGCATTTTTCATTT
TACAATCGCAATCATTTTCGTCTATAACAGTAGAGCCAGAATGGCAATTAGGCATTCCAT
GGCTATCATCAACTCAGATCGTCAACCCATGTACGTTATTGCCTGATCGATTGGTGAATT
GTTGATTCAGCTTTCATAGCA