Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0120800-03
CDS Infomation	cds chromosome:IRGSP-1.0:1:1172600:1179343:-1 gene:Os01g0120800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EUKARYOTIC INITIATION FACTOR 3A description:Similar to Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a). (Os01t0120800-01);Similar to Translation initiation factor 3. (Os01t0120800-02);Similar to Translation initiation factor 3. (Os01t0120800-03);Similar to Translation initiation factor 3. (Os01t0120800-04);Similar to Translation initiation factor 3. (Os01t0120800-05);Similar to Translation initiation factor 3. (Os01t0120800-06)
Sequence	ATGGCGACCTTCGCGAAACCTGAGAACGCGCTCAAGAGAGCGGAGGAGTTGATACATGTT GGGCAGAAGCAGGCAGCGCTACAGGCGTTACATGATCTCATCACTTCAAAAAGATACAGG TCATGGCAAAAGCCACTCGAAAGGATTATGATGAAGTATGTGGAGCTCTGTGTAGACCTG AGGAAGGGCAGGTTTGCGAAAGATGGCCTTATTCAGTACAGGATTGTCTGCCAGCAAGTG AATGTGTCATCCTTGGAGGAGGTGATAAAACACTTCATGCAGCTTTCCAATGAGAAAGCA GAGCAAGCAAGGAACCAGGCGCAAGCACTGGAAGATGCCCTGGATGTAGAAGATCTGGAA GCAGACAAGCGGCCTGAGGATTTGATGCTCAGCTATGTCAGCGGGGAGAAAGGGAAGGAC CGATCAGACAGAGAGCATGTCACACCATGGTTCAAGTTTCTCTGGGAAACATACAGAACA GTTCTTGAGATATTGAGAAACAATTCAAAGCTTGAAGCATTATATGCTATGACTGCTCAC AAGGCTTTTCAATTTTGTAAGCAGTATAAGAGAACGACTGAATTCCGTAGGTTGTGCGAG ATAATAAGAAATCATCTTGCTAACTTGAACAAATACCGTGACCAGCGAGATCGTCCTGAT CTGACTGCCCCAGAAAGCTTACAGCTATACCTGGACACTAGAGTTGAACAACTAAAAATT GCTACAGAGCTCTCTCTCTGGCAGGAGGCCTTTAGGTCTGTGGAAGACATCCATGGCTTG ATGAGCATGGTGAAGAAAACACCAAAACCATCTGTCCTGGTTGTGTATTATGCCAAGTTG ACTGAAATATTCTGGATATCTGATTGCCACTTGTATCATGCATATGCATGGCTTAAGCTA TTCTACTTGCAGAAAAGCTACAATAAGAACTTGTCTCAGAAGGACCTTCAATTAATAGCT TCTTCTGTTTTGCTTGCTGCACTTGCCGTGTCACCATATGACCATAAATATGGCGCATCT CATCTTGAGCTTGAAAATGAGAAAGATCGTAATCTGCGGATAGCTAATCTCGTCAACTTC TCCCTTGACTCCAAGCGTGAGAATAGAGAAGTGCCATCAAGAGCATCTCTTTTTTCTGAG CTGGCTGCCAAAGGTGTCATTGCCTGTGCTTCACAAGATGTCAAAGATTTATACAACCTT TTGGAACACGATTTTCTTCCTCTGGATCTCGTATCCAAAGCACAGCCACTGCTATCTAAG ATTTCAAAGATTGGAGGGAAGCTTTCATCAGCTCCCTTGGTTCCAGAAGTTTTTCTGTCA CAGTACCTTCCTGCTTTGGAGAAGTTAACAACTTTAAGGGTGTTGCAACAGGCTTCCCAG ATATTTCAGTCTGTGAAAATTGATATGCTCTCAAGAATGATCCCATTCTTTGACTTTTCT GTTGTTGAGAAGATCTCTGTTGATGCCGTGAAACACAATTTTGTTGCTATGAAAGTCAAC CATTTATCAGGAGCTGTCCATTTTGGGAAAATGGACATTGAATCTGATTGTCTCAGTAAT CACCTAAGTGTTTTGGCTGATTCTCTAAATAAAGCAAGGAGCCTTATCCATCCACCTGTG AAGAAGCCATCCAAGCTTGGTGAAAACTTAACGAGTCTTGCTGCAGTAGTGGAGAATGAG CACAAGCGTCTTCTTGCGAGGAAATCAATTATTGAAAAACGCAAAGAAGATCTTGAGCGC CAAATATTGGAAAAGGAAAAGGAAGAAGAAAAAAAGAGATTGAGTGTTCTCAAGAAATCT GCAGAAGATGAAAGGATAAGGCTTCTCAATGATGTAAAATTGAGGGAACAGGAGAGGATC CGTCGACAATTGGTTGAAAAAGAAAAGATAGAGGCAGAAGAACTGCTTCAGAAACAGATA AAGGAGATAGCAAAGAGAGGAGGAAAAAAACCTGTCCTTCAGGGGGAAGTTACTAAGGAG GCTGTGATGGAATTGGCTATGAATGAGCAGTTTAAGGAGCGCCAAGAGATGGAGAAAAAA CTACAGAAGACTGGTAAGCAAATGGATTACTTGGAGAGGGCAAAAAGGCAGGAAGAGGCA CCTCTAATTGAGCAAGCTTTTCAAAAACGCCTTGAAGTAGAGAAAATCCTTCATGAGCAA GAGCAGCTGAGAGAGATTGAGCTCAGCAAGCAACACCATGCAGGTGACCTGCAGGAGAAG AACAGACTTTCTCGAATGTTGGAGCATAAGAACATTTTCCAGGAAAGAATTGTCCAACGT CGTGAAGCTGAGTTTAGTCGTCTTAAGAAAGAGAGGGATGAAAGGACTAGTCAATTGATA TCATCAAGGAAGCGTGAAAGGGATACAGTGCGGAAGTTAATGTACTATCTTAACTTAGAA GAGCAGCGCCTCCAAAGGCTCCGTGAGGAAGAGGAAGCTAGAAAACGTGAAGAGGAAGAG AGGAGAAAGAGGGAAGAGACTGAGAGGAAGGCTAAGCTGGATGCAATTGCAGCCAAGCAG CTGCAGAGAGAGAGGGAACT

Peptide Sequence

PEP ID	Os01t0120800-03
PEP Infomation	pep chromosome:IRGSP-1.0:1:1172600:1179343:-1 gene:Os01g0120800 transcript:Os01t0120800-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EUKARYOTIC INITIATION FACTOR 3A description:Similar to Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a). (Os01t0120800-01);Similar to Translation initiation factor 3. (Os01t0120800-02);Similar to Translation initiation factor 3. (Os01t0120800-03);Similar to Translation initiation factor 3. (Os01t0120800-04);Similar to Translation initiation factor 3. (Os01t0120800-05);Similar to Translation initiation factor 3. (Os01t0120800-06)
Sequence	MATFAKPENALKRAEELIHVGQKQAALQALHDLITSKRYRSWQKPLERIMMKYVELCVDL RKGRFAKDGLIQYRIVCQQVNVSSLEEVIKHFMQLSNEKAEQARNQAQALEDALDVEDLE ADKRPEDLMLSYVSGEKGKDRSDREHVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH KAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLTAPESLQLYLDTRVEQLKI ATELSLWQEAFRSVEDIHGLMSMVKKTPKPSVLVVYYAKLTEIFWISDCHLYHAYAWLKL FYLQKSYNKNLSQKDLQLIASSVLLAALAVSPYDHKYGASHLELENEKDRNLRIANLVNF SLDSKRENREVPSRASLFSELAAKGVIACASQDVKDLYNLLEHDFLPLDLVSKAQPLLSK ISKIGGKLSSAPLVPEVFLSQYLPALEKLTTLRVLQQASQIFQSVKIDMLSRMIPFFDFS VVEKISVDAVKHNFVAMKVNHLSGAVHFGKMDIESDCLSNHLSVLADSLNKARSLIHPPV KKPSKLGENLTSLAAVVENEHKRLLARKSIIEKRKEDLERQILEKEKEEEKKRLSVLKKS AEDERIRLLNDVKLREQERIRRQLVEKEKIEAEELLQKQIKEIAKRGGKKPVLQGEVTKE AVMELAMNEQFKERQEMEKKLQKTGKQMDYLERAKRQEEAPLIEQAFQKRLEVEKILHEQ EQLREIELSKQHHAGDLQEKNRLSRMLEHKNIFQERIVQRREAEFSRLKKERDERTSQLI SSRKRERDTVRKLMYYLNLEEQRLQRLREEEEARKREEEERRKREETERKAKLDAIAAKQ LQRERE

Transcript Sequence

Transcript ID	Os01t0120800-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:1172600:1179343:-1 gene:Os01g0120800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EUKARYOTIC INITIATION FACTOR 3A description:Similar to Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a). (Os01t0120800-01);Similar to Translation initiation factor 3. (Os01t0120800-02);Similar to Translation initiation factor 3. (Os01t0120800-03);Similar to Translation initiation factor 3. (Os01t0120800-04);Similar to Translation initiation factor 3. (Os01t0120800-05);Similar to Translation initiation factor 3. (Os01t0120800-06)
Sequence	CACTCTCCTACGCTTCCACCCCCCATTCCCATCCCCTCCACCCAGATCGCCGCCGCCGCC TTCGCCTCGGACGGCCGTACGGCGCCGTCCACCGCGCACGTCTCCGGCGATCTACAGGTG TAGATCGCTTCCGGAGACATCCAACCGCGGCCATGGCGACCTTCGCGAAACCTGAGAACG CGCTCAAGAGAGCGGAGGAGTTGATACATGTTGGGCAGAAGCAGGCAGCGCTACAGGCGT TACATGATCTCATCACTTCAAAAAGATACAGGTCATGGCAAAAGCCACTCGAAAGGATTA TGATGAAGTATGTGGAGCTCTGTGTAGACCTGAGGAAGGGCAGGTTTGCGAAAGATGGCC TTATTCAGTACAGGATTGTCTGCCAGCAAGTGAATGTGTCATCCTTGGAGGAGGTGATAA AACACTTCATGCAGCTTTCCAATGAGAAAGCAGAGCAAGCAAGGAACCAGGCGCAAGCAC TGGAAGATGCCCTGGATGTAGAAGATCTGGAAGCAGACAAGCGGCCTGAGGATTTGATGC TCAGCTATGTCAGCGGGGAGAAAGGGAAGGACCGATCAGACAGAGAGCATGTCACACCAT GGTTCAAGTTTCTCTGGGAAACATACAGAACAGTTCTTGAGATATTGAGAAACAATTCAA AGCTTGAAGCATTATATGCTATGACTGCTCACAAGGCTTTTCAATTTTGTAAGCAGTATA AGAGAACGACTGAATTCCGTAGGTTGTGCGAGATAATAAGAAATCATCTTGCTAACTTGA ACAAATACCGTGACCAGCGAGATCGTCCTGATCTGACTGCCCCAGAAAGCTTACAGCTAT ACCTGGACACTAGAGTTGAACAACTAAAAATTGCTACAGAGCTCTCTCTCTGGCAGGAGG CCTTTAGGTCTGTGGAAGACATCCATGGCTTGATGAGCATGGTGAAGAAAACACCAAAAC CATCTGTCCTGGTTGTGTATTATGCCAAGTTGACTGAAATATTCTGGATATCTGATTGCC ACTTGTATCATGCATATGCATGGCTTAAGCTATTCTACTTGCAGAAAAGCTACAATAAGA ACTTGTCTCAGAAGGACCTTCAATTAATAGCTTCTTCTGTTTTGCTTGCTGCACTTGCCG TGTCACCATATGACCATAAATATGGCGCATCTCATCTTGAGCTTGAAAATGAGAAAGATC GTAATCTGCGGATAGCTAATCTCGTCAACTTCTCCCTTGACTCCAAGCGTGAGAATAGAG AAGTGCCATCAAGAGCATCTCTTTTTTCTGAGCTGGCTGCCAAAGGTGTCATTGCCTGTG CTTCACAAGATGTCAAAGATTTATACAACCTTTTGGAACACGATTTTCTTCCTCTGGATC TCGTATCCAAAGCACAGCCACTGCTATCTAAGATTTCAAAGATTGGAGGGAAGCTTTCAT CAGCTCCCTTGGTTCCAGAAGTTTTTCTGTCACAGTACCTTCCTGCTTTGGAGAAGTTAA CAACTTTAAGGGTGTTGCAACAGGCTTCCCAGATATTTCAGTCTGTGAAAATTGATATGC TCTCAAGAATGATCCCATTCTTTGACTTTTCTGTTGTTGAGAAGATCTCTGTTGATGCCG TGAAACACAATTTTGTTGCTATGAAAGTCAACCATTTATCAGGAGCTGTCCATTTTGGGA AAATGGACATTGAATCTGATTGTCTCAGTAATCACCTAAGTGTTTTGGCTGATTCTCTAA ATAAAGCAAGGAGCCTTATCCATCCACCTGTGAAGAAGCCATCCAAGCTTGGTGAAAACT TAACGAGTCTTGCTGCAGTAGTGGAGAATGAGCACAAGCGTCTTCTTGCGAGGAAATCAA TTATTGAAAAACGCAAAGAAGATCTTGAGCGCCAAATATTGGAAAAGGAAAAGGAAGAAG AAAAAAAGAGATTGAGTGTTCTCAAGAAATCTGCAGAAGATGAAAGGATAAGGCTTCTCA ATGATGTAAAATTGAGGGAACAGGAGAGGATCCGTCGACAATTGGTTGAAAAAGAAAAGA TAGAGGCAGAAGAACTGCTTCAGAAACAGATAAAGGAGATAGCAAAGAGAGGAGGAAAAA AACCTGTCCTTCAGGGGGAAGTTACTAAGGAGGCTGTGATGGAATTGGCTATGAATGAGC AGTTTAAGGAGCGCCAAGAGATGGAGAAAAAACTACAGAAGACTGGTAAGCAAATGGATT ACTTGGAGAGGGCAAAAAGGCAGGAAGAGGCACCTCTAATTGAGCAAGCTTTTCAAAAAC GCCTTGAAGTAGAGAAAATCCTTCATGAGCAAGAGCAGCTGAGAGAGATTGAGCTCAGCA AGCAACACCATGCAGGTGACCTGCAGGAGAAGAACAGACTTTCTCGAATGTTGGAGCATA AGAACATTTTCCAGGAAAGAATTGTCCAACGTCGTGAAGCTGAGTTTAGTCGTCTTAAGA AAGAGAGGGATGAAAGGACTAGTCAATTGATATCATCAAGGAAGCGTGAAAGGGATACAG TGCGGAAGTTAATGTACTATCTTAACTTAGAAGAGCAGCGCCTCCAAAGGCTCCGTGAGG AAGAGGAAGCTAGAAAACGTGAAGAGGAAGAGAGGAGAAAGAGGGAAGAGACTGAGAGGA AGGCTAAGCTGGATGCAATTGCAGCCAAGCAGCTGCAGAGAGAGAGGGAACT