Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0118700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:1071962:1074829:-1 gene:Os01g0118700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HGA4. (Os01t0118700-01)
Sequence	ATGGGAGGCGATCATGGGAAGCTCATGAAGAGCTTGAAGGGTGCAGCTCAGAAGTATCTC GGCGTCGGCTTCTTGCTCGGCTTCTTCCTTGTTCTCCTCACATACTTCACCGTCTCCGAG CAGTTCGCGATCGCTGCACCCAACGCAATTCGGAAAACATCACCGGGACACGCCTCCCCG ACGATCCCCCCGCCTGTGGAAGAGAAGAGGCCACAGCTGCCCCCTATCATAGAGCAGCGG CAAGCACCAAAGGCAGAGCATGAGCATGCAGCGGTGGTACAGGAGAAGACCCCGTCAGCT GAAGAGATAGAGATACAGAAAGAAACAGAAGAGGACCACACCAAGGAGAAGCCCACTGAT GACGTCACCACCACGGTGGAGGAGAGCGCGCCGGCGAAGAAGCCGGCGTGCGACATCCAG GGGCCATGGGCGTCCGACGTGTGCAGCATCGACGGCGACGTGCGCATCCACGGCGCGGCG CACGACGTCGTGATCCCGCCGCCGATCGAGGGCGGCGGCAGCAACCCGAACCCGCGGGAG TGGCGCGTCGTGCCCTACTCGCGGAAGCACATGGGCGGGCTCAAGGAGGTGGCGGTGCGG GAGGTGGCGTCGGCGGCGGAGGCGCCGGCGTGCGACGTGCGGTCGCCGGTGCCGGCGCTG GTGTTCGCCATGGGCGGGCTGACGGGCAACTACTGGCACGACTTCTCCGACGTGCTCATC CCGCTGTACCTGCAGGCGCGGCGGTTCGACGGCGAGGTGCAGCTCGTTGTGGAGAACATC CAGATGTGGTACGTGGGCAAGTACAAGCGCGTCCTGGACCGGCTGTCGCGCCACGACATC GTCGACATGGACAGGGACGACAAGGTCCGGTGCTTCCCCGGCGCGGTGGTCGGCATCCGG ATGCACAAGGAGTTCAGCATCGACCCGGCGCGGGATCCCACGGGCCACTCCATGCCGGAG TTCACCAAGTTCCTCCGCGACACCTTCTCGCTGCCGCGCGACGCGCCGGTGAGCCTCGTC GACAATGCCGCGGCGGTGAGGCCGCGGTTGATGATCATCTCGCGGCGGCACCCGCGGAAG CTGATGAACGTGGAGGAGGTGGTGCGGGCGGCGGAGCGGATCGGGTTCGAGGTGGTGATC GGCGACCCGCCGTTCAACGTGGACGTCGGCGAGTTCGCCAAGGAGGTGAACCGCGCGGAC GTGCTGATGGGCGTCCATGGCGCGGGGCTGACGAACTCGGTGTTCCTGCCGACGGGGGCG GTGCTGATCCAGGTGGTGCCGTACGGGAAGATGGAGCACATCGGGAAGGTGGACTTCGGC GATCCGGCGGAGGACATGAGGCTCAAGTACATGGCGTACTCCGCCGGCGTGGAGGAGAGC ACGCTGGTGGAGACGCTGGGGCGCGACCACCCGGCGGTGCGCGACCCGGAGTCGGTCCAC CGGAGCGGGTGGGGGAAGGTCGCCGAGTACTACCTCGGCAAGCAGGACATCCGCCTCGAT CTCGCCCGCTTCGAGCCCCTCCTCCGCGACGCCATGGATTACCTCAAACACCAGTAG

Peptide Sequence

PEP ID	Os01t0118700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:1071962:1074829:-1 gene:Os01g0118700 transcript:Os01t0118700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HGA4. (Os01t0118700-01)
Sequence	MGGDHGKLMKSLKGAAQKYLGVGFLLGFFLVLLTYFTVSEQFAIAAPNAIRKTSPGHASP TIPPPVEEKRPQLPPIIEQRQAPKAEHEHAAVVQEKTPSAEEIEIQKETEEDHTKEKPTD DVTTTVEESAPAKKPACDIQGPWASDVCSIDGDVRIHGAAHDVVIPPPIEGGGSNPNPRE WRVVPYSRKHMGGLKEVAVREVASAAEAPACDVRSPVPALVFAMGGLTGNYWHDFSDVLI PLYLQARRFDGEVQLVVENIQMWYVGKYKRVLDRLSRHDIVDMDRDDKVRCFPGAVVGIR MHKEFSIDPARDPTGHSMPEFTKFLRDTFSLPRDAPVSLVDNAAAVRPRLMIISRRHPRK LMNVEEVVRAAERIGFEVVIGDPPFNVDVGEFAKEVNRADVLMGVHGAGLTNSVFLPTGA VLIQVVPYGKMEHIGKVDFGDPAEDMRLKYMAYSAGVEESTLVETLGRDHPAVRDPESVH RSGWGKVAEYYLGKQDIRLDLARFEPLLRDAMDYLKHQ

Transcript Sequence

Transcript ID	Os01t0118700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:1071962:1074829:-1 gene:Os01g0118700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HGA4. (Os01t0118700-01)
Sequence	AGGAAGGATTCAGACATTCAGAGAGAGAGGAGAGGGAGGAGAGATGGGAGGCGATCATGG GAAGCTCATGAAGAGCTTGAAGGGTGCAGCTCAGAAGTATCTCGGCGTCGGCTTCTTGCT CGGCTTCTTCCTTGTTCTCCTCACATACTTCACCGTCTCCGAGCAGTTCGCGATCGCTGC ACCCAACGCAATTCGGAAAACATCACCGGGACACGCCTCCCCGACGATCCCCCCGCCTGT GGAAGAGAAGAGGCCACAGCTGCCCCCTATCATAGAGCAGCGGCAAGCACCAAAGGCAGA GCATGAGCATGCAGCGGTGGTACAGGAGAAGACCCCGTCAGCTGAAGAGATAGAGATACA GAAAGAAACAGAAGAGGACCACACCAAGGAGAAGCCCACTGATGACGTCACCACCACGGT GGAGGAGAGCGCGCCGGCGAAGAAGCCGGCGTGCGACATCCAGGGGCCATGGGCGTCCGA CGTGTGCAGCATCGACGGCGACGTGCGCATCCACGGCGCGGCGCACGACGTCGTGATCCC GCCGCCGATCGAGGGCGGCGGCAGCAACCCGAACCCGCGGGAGTGGCGCGTCGTGCCCTA CTCGCGGAAGCACATGGGCGGGCTCAAGGAGGTGGCGGTGCGGGAGGTGGCGTCGGCGGC GGAGGCGCCGGCGTGCGACGTGCGGTCGCCGGTGCCGGCGCTGGTGTTCGCCATGGGCGG GCTGACGGGCAACTACTGGCACGACTTCTCCGACGTGCTCATCCCGCTGTACCTGCAGGC GCGGCGGTTCGACGGCGAGGTGCAGCTCGTTGTGGAGAACATCCAGATGTGGTACGTGGG CAAGTACAAGCGCGTCCTGGACCGGCTGTCGCGCCACGACATCGTCGACATGGACAGGGA CGACAAGGTCCGGTGCTTCCCCGGCGCGGTGGTCGGCATCCGGATGCACAAGGAGTTCAG CATCGACCCGGCGCGGGATCCCACGGGCCACTCCATGCCGGAGTTCACCAAGTTCCTCCG CGACACCTTCTCGCTGCCGCGCGACGCGCCGGTGAGCCTCGTCGACAATGCCGCGGCGGT GAGGCCGCGGTTGATGATCATCTCGCGGCGGCACCCGCGGAAGCTGATGAACGTGGAGGA GGTGGTGCGGGCGGCGGAGCGGATCGGGTTCGAGGTGGTGATCGGCGACCCGCCGTTCAA CGTGGACGTCGGCGAGTTCGCCAAGGAGGTGAACCGCGCGGACGTGCTGATGGGCGTCCA TGGCGCGGGGCTGACGAACTCGGTGTTCCTGCCGACGGGGGCGGTGCTGATCCAGGTGGT GCCGTACGGGAAGATGGAGCACATCGGGAAGGTGGACTTCGGCGATCCGGCGGAGGACAT GAGGCTCAAGTACATGGCGTACTCCGCCGGCGTGGAGGAGAGCACGCTGGTGGAGACGCT GGGGCGCGACCACCCGGCGGTGCGCGACCCGGAGTCGGTCCACCGGAGCGGGTGGGGGAA GGTCGCCGAGTACTACCTCGGCAAGCAGGACATCCGCCTCGATCTCGCCCGCTTCGAGCC CCTCCTCCGCGACGCCATGGATTACCTCAAACACCAGTAGAGGCGAGCTCCATCCACAAA GACTACTGTAATTAGCTACTAGCTGCAACATTTTTTTTTTTTTGAATGCCTAGCTGCAAC ATTTTCATTTTCGTTCTCTATGCTTTTTTTTTTTTGCTTTCTATTCTTTCGAGTTCTTTC ACAGAAAAAAGAAATCGATCGATTATTTGATCAGGATTACAGTTACATTATACTACTTCT CTTTGTATTCCCTTTGATGCACATAATGGAGGATGGAATGGAACGAAATCGATTCATTAT TAGCACTGAATTGTGTTCGCATTTGGTGATCTCTAGTTTCAACTCGATCAAATAAGTGTT CATTTTTTTTTTAAAAAAAGTACAATTAGAATACCCAACAACTACTAGAAATTGTACAAG TACATTGTGTAGCACATATGCACATGTCGTTGTTAGAGATGACAGATTTGCATTGAGTGT GTTGTTGTTGTAAACAAGTAGCAGAGGTTGGTAGAGTTTGGTTGTCC