Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0118600-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:1066678:1069673:-1 gene:Os01g0118600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Hga5 protein. (Os01t0118600-00)
Sequence	ATGAAGGCGGCGGCGAGGGAGAGGAAGCCGAGGCACAGCAACGGGAGGGCCGCGGCGGCG GCTGCCAAGAACCTGAGCAAGGTCGAGCCCGGCAGGCACCTCGCCGTCGTCAGGCTTTTT CCGGCGTGCCTCCTCGCCCTGCTTATCTGCCTCTGCGTCGTCAAGTTCTTCTCCTCTCTC TCGTCTCAATCCCAGCGGATTGGAACCAGGAGCAGGATGGTGAGTTCTTGGGAAGGCAGC GCCAGTACGAATGTACCTCGAATTCCTGTTGCTCCTCTGATTATGGGCAGGGTCGATGAA GATATTTCGACAAGATCGCCGGAATTAGGTTCCGTGTTTAAAAATGAAAATTTTAAGAAT GGGACAGATTCAGAGAATAAATCAAGATCAGAGAGACAGGTTGCAATCTCTACAGAGAAT GATCCCCCTCCTGGAAAGGAAGAATCTTTGACAAAATCACCACAGACAGCAGTTTCAGAG AGTGAAGTTCCAAAGCCTAAGAGTAAGATAAGTTGTGATGATAAGAGTAAAGATGAAGGC TTCCCTTATGCAAGGCCAATCGTCTGCCACCTGTCCGGCGACGTTCGAGTTTCTCCGGCG ACCTCCTCGGTTACCCTGACCATGCCATTGCAGCAAGGGGAGGCAGCGGCGCGGCGCATC AGGCCATATGCACGCCGGGACGACTTCCTGCTACCTCTTGTCAGAGAAGTGGCCATCACA TCAGCTGCAAGTGAAGGCGATGCTCCCAGCTGCAATGTCAGCCATGGCGTCCCCGCGGTC ATCTTCTCCATCGGCGGCTACACCGGCAACTTCTTCCATGACATGGCAGACGTGCTGGTG CCTCTGTACCTCACCACCTTCCATTTCAAAGGGAAGGTACAGCTGTTCGTTGCAAACTAC AAGCAATGGTGGATTCAGAAGTACAAGCCGGTGCTCCGGCGGCTTTCGCATCGAGCCGTC GTCGATTTCGACTCCGACGGCGATGTCCATTGCTTCGATCATGTGATCGTGGGCTTGGTG AGAGACAGGGACCTGATCCTTGGGCAGCATCCGACGAGGAACCCCAAGGGGTACACCATG GTCGACTTCACGAGGTTCTTGCGCCACGCGTACGGGCTGAGGAGGGACAAGCCCATGGTG CTCGGCGAGACGAGCGGCAAGAAGCCGAGGATGCTGATCATATCGCGGCGGCGGACGAGG AAGCTGCTGAACCTACGGCAGGTGGCGGCCATGGCGAGGGAGCTGGGATTCGAGGTGGTG GTCTCCGAGGCCGGCGTCGGCGGCGGCAGCGGCGGCGTGAAGAGGTTCGCGTCGGCGGTG AACTCGTGCGACGTGCTGGTGGGCGTCCACGGCGCCGGGCTGACGAACCAGGCGTTCCTC CCCCGGGGCGGCGTGGTGGTGCAGATCGTGCCGTGGGGGAGGATGGAGTGGATGGCGACC AACTTCTACGGCGCGCCGGCGGCGGCCATGGAGCTCAGGTACGTGGAGTACCACGTGGCG GCGGAGGAGAGCAGCCTGGCGAGGAGGTACCCGAGGGAGCACGCCGTGTTCAGGGACCCC ATGGCCATCCATGGCCAGGGGTGGAAGGCGCTCGCTGACATCGTCATGACGCAGGATGTC AAGCTCAACCTGCGAAGGTTCAGGCCTACGCTTCTGCGTGTGCTTGATCTTCTTCAGGAC TAG

Peptide Sequence

PEP ID	Os01t0118600-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:1066678:1069673:-1 gene:Os01g0118600 transcript:Os01t0118600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Hga5 protein. (Os01t0118600-00)
Sequence	MKAAARERKPRHSNGRAAAAAAKNLSKVEPGRHLAVVRLFPACLLALLICLCVVKFFSSL SSQSQRIGTRSRMVSSWEGSASTNVPRIPVAPLIMGRVDEDISTRSPELGSVFKNENFKN GTDSENKSRSERQVAISTENDPPPGKEESLTKSPQTAVSESEVPKPKSKISCDDKSKDEG FPYARPIVCHLSGDVRVSPATSSVTLTMPLQQGEAAARRIRPYARRDDFLLPLVREVAIT SAASEGDAPSCNVSHGVPAVIFSIGGYTGNFFHDMADVLVPLYLTTFHFKGKVQLFVANY KQWWIQKYKPVLRRLSHRAVVDFDSDGDVHCFDHVIVGLVRDRDLILGQHPTRNPKGYTM VDFTRFLRHAYGLRRDKPMVLGETSGKKPRMLIISRRRTRKLLNLRQVAAMARELGFEVV VSEAGVGGGSGGVKRFASAVNSCDVLVGVHGAGLTNQAFLPRGGVVVQIVPWGRMEWMAT NFYGAPAAAMELRYVEYHVAAEESSLARRYPREHAVFRDPMAIHGQGWKALADIVMTQDV KLNLRRFRPTLLRVLDLLQD

Transcript Sequence

Transcript ID	Os01t0118600-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:1066678:1069673:-1 gene:Os01g0118600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Hga5 protein. (Os01t0118600-00)
Sequence	ATGAAGGCGGCGGCGAGGGAGAGGAAGCCGAGGCACAGCAACGGGAGGGCCGCGGCGGCG GCTGCCAAGAACCTGAGCAAGGTCGAGCCCGGCAGGCACCTCGCCGTCGTCAGGCTTTTT CCGGCGTGCCTCCTCGCCCTGCTTATCTGCCTCTGCGTCGTCAAGTTCTTCTCCTCTCTC TCGTCTCAATCCCAGCGGATTGGAACCAGGAGCAGGATGGTGAGTTCTTGGGAAGGCAGC GCCAGTACGAATGTACCTCGAATTCCTGTTGCTCCTCTGATTATGGGCAGGGTCGATGAA GATATTTCGACAAGATCGCCGGAATTAGGTTCCGTGTTTAAAAATGAAAATTTTAAGAAT GGGACAGATTCAGAGAATAAATCAAGATCAGAGAGACAGGTTGCAATCTCTACAGAGAAT GATCCCCCTCCTGGAAAGGAAGAATCTTTGACAAAATCACCACAGACAGCAGTTTCAGAG AGTGAAGTTCCAAAGCCTAAGAGTAAGATAAGTTGTGATGATAAGAGTAAAGATGAAGGC TTCCCTTATGCAAGGCCAATCGTCTGCCACCTGTCCGGCGACGTTCGAGTTTCTCCGGCG ACCTCCTCGGTTACCCTGACCATGCCATTGCAGCAAGGGGAGGCAGCGGCGCGGCGCATC AGGCCATATGCACGCCGGGACGACTTCCTGCTACCTCTTGTCAGAGAAGTGGCCATCACA TCAGCTGCAAGTGAAGGCGATGCTCCCAGCTGCAATGTCAGCCATGGCGTCCCCGCGGTC ATCTTCTCCATCGGCGGCTACACCGGCAACTTCTTCCATGACATGGCAGACGTGCTGGTG CCTCTGTACCTCACCACCTTCCATTTCAAAGGGAAGGTACAGCTGTTCGTTGCAAACTAC AAGCAATGGTGGATTCAGAAGTACAAGCCGGTGCTCCGGCGGCTTTCGCATCGAGCCGTC GTCGATTTCGACTCCGACGGCGATGTCCATTGCTTCGATCATGTGATCGTGGGCTTGGTG AGAGACAGGGACCTGATCCTTGGGCAGCATCCGACGAGGAACCCCAAGGGGTACACCATG GTCGACTTCACGAGGTTCTTGCGCCACGCGTACGGGCTGAGGAGGGACAAGCCCATGGTG CTCGGCGAGACGAGCGGCAAGAAGCCGAGGATGCTGATCATATCGCGGCGGCGGACGAGG AAGCTGCTGAACCTACGGCAGGTGGCGGCCATGGCGAGGGAGCTGGGATTCGAGGTGGTG GTCTCCGAGGCCGGCGTCGGCGGCGGCAGCGGCGGCGTGAAGAGGTTCGCGTCGGCGGTG AACTCGTGCGACGTGCTGGTGGGCGTCCACGGCGCCGGGCTGACGAACCAGGCGTTCCTC CCCCGGGGCGGCGTGGTGGTGCAGATCGTGCCGTGGGGGAGGATGGAGTGGATGGCGACC AACTTCTACGGCGCGCCGGCGGCGGCCATGGAGCTCAGGTACGTGGAGTACCACGTGGCG GCGGAGGAGAGCAGCCTGGCGAGGAGGTACCCGAGGGAGCACGCCGTGTTCAGGGACCCC ATGGCCATCCATGGCCAGGGGTGGAAGGCGCTCGCTGACATCGTCATGACGCAGGATGTC AAGCTCAACCTGCGAAGGTTCAGGCCTACGCTTCTGCGTGTGCTTGATCTTCTTCAGGAC TAG