Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0118400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:1057177:1059852:-1 gene:Os01g0118400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HGA6. (Os01t0118400-01)
Sequence	ATGAAGCCGGGGGGGAGCAGCGGGCGGCTGCACGCCCTGCGGTTCGAGTCGCAGAGGTTC AGGCTGCTGACCATCGTCGTCGGCTGCTTCCTCATCTCCCTCACCTTCCTCCTCTCCTCC CGCCCCGACGCCACCGTCTTCTCCACCCTGAGCCCCAGGGAGTCGTTGGAAGACGCACGC ATGCCGGCGATGAAGATGCTGCACCGATCATCGTCCGGCGGCCTCACCCGGGATTTCCAT GTCGACATCCTGCCGCAGCAGGGAGAGAGACATGCTCATATGCAGCAGAGCGTCGATCAA ACCGCTGAAAAGACAGAATGGGTGAAAGACACGGTGATAATCCAGGAGGTCGCCGGCGAG AGATCGGAAGAGGCGGAGGAGGCGGCGGAGCGTGTCGCGGCAGATTCCGGCGACGAGGCT GCACCTGCAGTCGCCGACGAGGACAACGCCGTGAAGACCACGGCCGCCGTGGAAGAAACC ACTGCTCGTCCCGACCAGCCATTGGAGGAGAAGAATCAGCAGCAGCTTCCGGTGAAGCTG CAGGACGCCGGCGAGCCAGCTCGCACGCCGGAGCAAACGGTGACGTCACATTCCGTGGAC CGGCGGCCGCTCTGCGACTTCTCCGACTTCCGCACCGACATCTGCGACTTCTCCGGCGAC GTCCGCATGGCGGCCAACACGTCGGAGTTCGTCGTCGTCGTCGACCCGGCGGCGGCGGCG GTGTCGCACAAGGTGCGGCCGTACCCGCGGAAGGGCGACGCGACGTGCATGGGGCGCGTC ACGGAGATCACCGTGCGCGCCACGGGCGACGCGGCGGGCGCGCCGCGGTGCACGCGGGCG CACGACGTGCCCGCCGTGGCGTTCTCCATCGGCGGGTACACGGGCAACATCTTCCACGAC TTCTCCGACGTGATCGTGCCGCTGTACAACACCGTGCAGCGCTACCGCGGCGGGGTGCAG CTGGTGATGGTGAACGTGGCGTCGTGGTGGCTCGTCAAGTACGACAAGCTCCTCCGCGAG CTGTCGCGCCACGCGCCGATCGACCTCGCCAAGGCCGGCGCCGCCGGCGAGGTGCACTGC TTCCCGAGCGCCGTCGTCAGCCTCCGCGCGCACCGGGAGCTCATCATCGAGCGGGAGCGC AGCCTGGACGGGCTGGCGACGCCGGACTTCACGCGGTTCCTCCGCCGCGCGCTGTCGCTG CCGCGCGACGCGCCGACGCGGCTCGGCGACGGCACCGGGCGGCGGCCGCGCCTCCTGGTC ATCTCCCGGGGGCGCACCAGGCTGCTCCTGAACCTCGACGCCGTGGTCCGCGCGGCGGAG GAGGTCGGGTTCGAGGTGGTGGTGAACGAGTCGGACGTGGGGAACTCCATCGAGCAGGTG GGGAAGCTGATCAACTCGTGCGACGCGCTGCTCGGCGTCCATGGCGCCGGCCTGACGAAC ATGATGTTCCTGCCGCCGGGAGCGACGATGGTGCAGGTGGTGCCATGGGGCGGCCTCCAG TGGATCGCGCGCATGGACTACGGCGAGCCGGCGGCGGCGATGGGGCTCAACTACATCCAG TACGAGATCGCCGTCGCCGAGAGCTCGCTCAAGGACAAGTACCCCGCCGGCGACGAGATC TTCACCAACCCGACGGGTCTGCACAAGAGAGGGTTCGCCTTCATGAAGCAGACGCTCATG GACGGCCAGGACATCACCATTGACGTCACCCGATTCAGGCCAGTGTTGCAGCAAGCTCTC GACAACCTTGCCACCAAGTAG

Peptide Sequence

PEP ID	Os01t0118400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:1057177:1059852:-1 gene:Os01g0118400 transcript:Os01t0118400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HGA6. (Os01t0118400-01)
Sequence	MKPGGSSGRLHALRFESQRFRLLTIVVGCFLISLTFLLSSRPDATVFSTLSPRESLEDAR MPAMKMLHRSSSGGLTRDFHVDILPQQGERHAHMQQSVDQTAEKTEWVKDTVIIQEVAGE RSEEAEEAAERVAADSGDEAAPAVADEDNAVKTTAAVEETTARPDQPLEEKNQQQLPVKL QDAGEPARTPEQTVTSHSVDRRPLCDFSDFRTDICDFSGDVRMAANTSEFVVVVDPAAAA VSHKVRPYPRKGDATCMGRVTEITVRATGDAAGAPRCTRAHDVPAVAFSIGGYTGNIFHD FSDVIVPLYNTVQRYRGGVQLVMVNVASWWLVKYDKLLRELSRHAPIDLAKAGAAGEVHC FPSAVVSLRAHRELIIERERSLDGLATPDFTRFLRRALSLPRDAPTRLGDGTGRRPRLLV ISRGRTRLLLNLDAVVRAAEEVGFEVVVNESDVGNSIEQVGKLINSCDALLGVHGAGLTN MMFLPPGATMVQVVPWGGLQWIARMDYGEPAAAMGLNYIQYEIAVAESSLKDKYPAGDEI FTNPTGLHKRGFAFMKQTLMDGQDITIDVTRFRPVLQQALDNLATK

Transcript Sequence

Transcript ID	Os01t0118400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:1057177:1059852:-1 gene:Os01g0118400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HGA6. (Os01t0118400-01)
Sequence	GTGCACAGAAGCTTCCACTTTCTAGCTTGCTAGCTTAGCCTGACGACGAGAGGAGGCATG CAGAGCTAAGCCGCCATTAGCAAGAGAGGAAGAAGAAGAAGAAGAAGAAGGTAGCTGAAG CCATGAAGCCGGGGGGGAGCAGCGGGCGGCTGCACGCCCTGCGGTTCGAGTCGCAGAGGT TCAGGCTGCTGACCATCGTCGTCGGCTGCTTCCTCATCTCCCTCACCTTCCTCCTCTCCT CCCGCCCCGACGCCACCGTCTTCTCCACCCTGAGCCCCAGGGAGTCGTTGGAAGACGCAC GCATGCCGGCGATGAAGATGCTGCACCGATCATCGTCCGGCGGCCTCACCCGGGATTTCC ATGTCGACATCCTGCCGCAGCAGGGAGAGAGACATGCTCATATGCAGCAGAGCGTCGATC AAACCGCTGAAAAGACAGAATGGGTGAAAGACACGGTGATAATCCAGGAGGTCGCCGGCG AGAGATCGGAAGAGGCGGAGGAGGCGGCGGAGCGTGTCGCGGCAGATTCCGGCGACGAGG CTGCACCTGCAGTCGCCGACGAGGACAACGCCGTGAAGACCACGGCCGCCGTGGAAGAAA CCACTGCTCGTCCCGACCAGCCATTGGAGGAGAAGAATCAGCAGCAGCTTCCGGTGAAGC TGCAGGACGCCGGCGAGCCAGCTCGCACGCCGGAGCAAACGGTGACGTCACATTCCGTGG ACCGGCGGCCGCTCTGCGACTTCTCCGACTTCCGCACCGACATCTGCGACTTCTCCGGCG ACGTCCGCATGGCGGCCAACACGTCGGAGTTCGTCGTCGTCGTCGACCCGGCGGCGGCGG CGGTGTCGCACAAGGTGCGGCCGTACCCGCGGAAGGGCGACGCGACGTGCATGGGGCGCG TCACGGAGATCACCGTGCGCGCCACGGGCGACGCGGCGGGCGCGCCGCGGTGCACGCGGG CGCACGACGTGCCCGCCGTGGCGTTCTCCATCGGCGGGTACACGGGCAACATCTTCCACG ACTTCTCCGACGTGATCGTGCCGCTGTACAACACCGTGCAGCGCTACCGCGGCGGGGTGC AGCTGGTGATGGTGAACGTGGCGTCGTGGTGGCTCGTCAAGTACGACAAGCTCCTCCGCG AGCTGTCGCGCCACGCGCCGATCGACCTCGCCAAGGCCGGCGCCGCCGGCGAGGTGCACT GCTTCCCGAGCGCCGTCGTCAGCCTCCGCGCGCACCGGGAGCTCATCATCGAGCGGGAGC GCAGCCTGGACGGGCTGGCGACGCCGGACTTCACGCGGTTCCTCCGCCGCGCGCTGTCGC TGCCGCGCGACGCGCCGACGCGGCTCGGCGACGGCACCGGGCGGCGGCCGCGCCTCCTGG TCATCTCCCGGGGGCGCACCAGGCTGCTCCTGAACCTCGACGCCGTGGTCCGCGCGGCGG AGGAGGTCGGGTTCGAGGTGGTGGTGAACGAGTCGGACGTGGGGAACTCCATCGAGCAGG TGGGGAAGCTGATCAACTCGTGCGACGCGCTGCTCGGCGTCCATGGCGCCGGCCTGACGA ACATGATGTTCCTGCCGCCGGGAGCGACGATGGTGCAGGTGGTGCCATGGGGCGGCCTCC AGTGGATCGCGCGCATGGACTACGGCGAGCCGGCGGCGGCGATGGGGCTCAACTACATCC AGTACGAGATCGCCGTCGCCGAGAGCTCGCTCAAGGACAAGTACCCCGCCGGCGACGAGA TCTTCACCAACCCGACGGGTCTGCACAAGAGAGGGTTCGCCTTCATGAAGCAGACGCTCA TGGACGGCCAGGACATCACCATTGACGTCACCCGATTCAGGCCAGTGTTGCAGCAAGCTC TCGACAACCTTGCCACCAAGTAGATTATGATTACATTTTGTTCCTAGTTCATCTCATCAC ATTCACATTCTTTTACCCTCTTCTTTTCCATCTCTCGAAGATTATATATATTGAATGCAC ACACTTGCAACTATATACTATTACACTGTAATTAAGATAGAATTTTAATGGGCGAATACA AAAATTGAGAGAGGAGATTGTCTGTTCTTGTGTACTGCTAGTCCTTTGATATAAGTCAAG TTGTGAAAG