Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0116600-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:929884:932368:-1 gene:Os01g0116600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SPOTTED LEAF 33 description:Eukaryotic translation elongation factor 1 alpha (eEF1A)-like protein, Negative regulation of cell death, Defense response (Os01t0116600-01);Similar to predicted protein. (Os01t0116600-02)
Sequence	GATACTGCAAAACCTTATTTACCTGAAGAATATAAGCCTGAGAAGTGGATGTTTGCTAAT GAGGAATCAGGAGTGCTGAGCCAACTAAACCTTGCAATAGTAGGTCATGTTGATTCTGGC AAGTCAACACTCTCTGGGAGACTGCTACATCTGTTAGGAAGGATATCGAAAAAAGATATG CACAAGAATGAGAAGGAGGCTAAAGAAAAAGGAAAAGGATCATTTGCTTATGCGTGGGCT ATGGATGAAAGCAGTGAAGAAAGAGAAAGAGGTGTGACAATGACTGTGGCTGTGGCTTAT TTGGAGACCAATAAGTACCGTGTAGTTTTGCTTGACTCTCCAGGCCATAAAGATTTTGTA CCAAATATGATATCTGGCGCAACGCAAGCTGATGCAGCTATTCTTGTTGTTGATGCTTGC ACTGGTTCATTTGAAGCTGGCATGGACGGTGAAGGAGGGAAAAGTGTTGGCCAGACAAAA GAACATGCTCAGCTTATTAGAAGCTTCGGCGTTGAACAGCTTATTGTTGCGGTCAACAAG ATGGATGCCATCGGGTACTCCAAAGAAAGATTCGAGTTCATCAAGGTTCAACTTGGTAGT TTTCTGCGGGCATGCAACTTCAAAGATTCATCTGTTACCTGGATTCCTCTTAGTGCTGTT GAAAATCAGAATTTGATCAAAATTCCTTCTGATGTCCGTTTAACTTCCTGGTATCAAGGA TTTTGTCTCTTGGATGCTATAGATTCCTTGCAGCTTCCATCTCGGGATGTTTCAAAGCCC CTCATTCTTCCTATCTGTGATGTTATCAAGTCTCAGTCAACAGGGCAGTTGGCAGCATTT GGAAAATTAGAGACTGGAGCTATTCGAATTGGTTCAAAGGTTTTAATTTCACCTTGTGGG GAAGTGGCGACAGTGAAATCCATCGAGCGGGATTCAAATTCATGTGACATAGCAAGAGCT GGTGATAATGTAGCGGTTAGTTTACAGGGCATCGATGGGAGTAAGCTAATAGCAGGTGGG ATTCTTTGCAACCCTGGTTTCCCAGTGCCTGTCTCTAACTTCTTGGAGCTAAGGGTTCTA GTGTTGGACGTCACCATTCCTATCCTTATTGGCTATCAGGTCGAGTTTCACATACATCAT GTGAAGGAGGCTGCGAGGGTTACGAAAATCGTGGCATTGCTTGACAAGGCTGGCAAACCA AGCAAAACTGCACCTCGATTTCTTAAGTCAAAGCAGAATGCAGTTGTGCAGGTTACCTTA GACGCTCCGGTCTGTGTTGAAGAATTCTCCAAATGCCGAGCTCTTGGCAGGGCATTCTTA AGGTCTGGTGGAAGCACAATCGCTGTTGGAGTCGTAACGCGGGTACTCGGGCAAGATCAG AACTGA

Peptide Sequence

PEP ID	Os01t0116600-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:929884:932368:-1 gene:Os01g0116600 transcript:Os01t0116600-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SPOTTED LEAF 33 description:Eukaryotic translation elongation factor 1 alpha (eEF1A)-like protein, Negative regulation of cell death, Defense response (Os01t0116600-01);Similar to predicted protein. (Os01t0116600-02)
Sequence	DTAKPYLPEEYKPEKWMFANEESGVLSQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDM HKNEKEAKEKGKGSFAYAWAMDESSEERERGVTMTVAVAYLETNKYRVVLLDSPGHKDFV PNMISGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNK MDAIGYSKERFEFIKVQLGSFLRACNFKDSSVTWIPLSAVENQNLIKIPSDVRLTSWYQG FCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQLAAFGKLETGAIRIGSKVLISPCG EVATVKSIERDSNSCDIARAGDNVAVSLQGIDGSKLIAGGILCNPGFPVPVSNFLELRVL VLDVTIPILIGYQVEFHIHHVKEAARVTKIVALLDKAGKPSKTAPRFLKSKQNAVVQVTL DAPVCVEEFSKCRALGRAFLRSGGSTIAVGVVTRVLGQDQN

Transcript Sequence

Transcript ID	Os01t0116600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:929884:932368:-1 gene:Os01g0116600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SPOTTED LEAF 33 description:Eukaryotic translation elongation factor 1 alpha (eEF1A)-like protein, Negative regulation of cell death, Defense response (Os01t0116600-01);Similar to predicted protein. (Os01t0116600-02)
Sequence	TAGATACTGCAAAACCTTATTTACCTGAAGAATATAAGCCTGAGAAGTGGATGTTTGCTA ATGAGGAATCAGGAGTGCTGAGCCAACTAAACCTTGCAATAGTAGGTCATGTTGATTCTG GCAAGTCAACACTCTCTGGGAGACTGCTACATCTGTTAGGAAGGATATCGAAAAAAGATA TGCACAAGAATGAGAAGGAGGCTAAAGAAAAAGGAAAAGGATCATTTGCTTATGCGTGGG CTATGGATGAAAGCAGTGAAGAAAGAGAAAGAGGTGTGACAATGACTGTGGCTGTGGCTT ATTTGGAGACCAATAAGTACCGTGTAGTTTTGCTTGACTCTCCAGGCCATAAAGATTTTG TACCAAATATGATATCTGGCGCAACGCAAGCTGATGCAGCTATTCTTGTTGTTGATGCTT GCACTGGTTCATTTGAAGCTGGCATGGACGGTGAAGGAGGGAAAAGTGTTGGCCAGACAA AAGAACATGCTCAGCTTATTAGAAGCTTCGGCGTTGAACAGCTTATTGTTGCGGTCAACA AGATGGATGCCATCGGGTACTCCAAAGAAAGATTCGAGTTCATCAAGGTTCAACTTGGTA GTTTTCTGCGGGCATGCAACTTCAAAGATTCATCTGTTACCTGGATTCCTCTTAGTGCTG TTGAAAATCAGAATTTGATCAAAATTCCTTCTGATGTCCGTTTAACTTCCTGGTATCAAG GATTTTGTCTCTTGGATGCTATAGATTCCTTGCAGCTTCCATCTCGGGATGTTTCAAAGC CCCTCATTCTTCCTATCTGTGATGTTATCAAGTCTCAGTCAACAGGGCAGTTGGCAGCAT TTGGAAAATTAGAGACTGGAGCTATTCGAATTGGTTCAAAGGTTTTAATTTCACCTTGTG GGGAAGTGGCGACAGTGAAATCCATCGAGCGGGATTCAAATTCATGTGACATAGCAAGAG CTGGTGATAATGTAGCGGTTAGTTTACAGGGCATCGATGGGAGTAAGCTAATAGCAGGTG GGATTCTTTGCAACCCTGGTTTCCCAGTGCCTGTCTCTAACTTCTTGGAGCTAAGGGTTC TAGTGTTGGACGTCACCATTCCTATCCTTATTGGCTATCAGGTCGAGTTTCACATACATC ATGTGAAGGAGGCTGCGAGGGTTACGAAAATCGTGGCATTGCTTGACAAGGCTGGCAAAC CAAGCAAAACTGCACCTCGATTTCTTAAGTCAAAGCAGAATGCAGTTGTGCAGGTTACCT TAGACGCTCCGGTCTGTGTTGAAGAATTCTCCAAATGCCGAGCTCTTGGCAGGGCATTCT TAAGGTCTGGTGGAAGCACAATCGCTGTTGGAGTCGTAACGCGGGTACTCGGGCAAGATC AGAACTGAAAGACCTCCGCCCAACATCTGAAAATTTGAACGTATCTGCAGCCGTGCCCTG CTTTGGGGTCCATAATATTGTAGTTGACTCAAAACGGTATTGCCGATGAGAAGAAGTTTG GCGACGGCATTTTTCACTGTGTGTTCGTCGCCATTTCAGAATTTAATCCGTCACTCTTTT AGTTATTTGTAATTTTCTTATGCCTAATGAAAAAGGGGGTTTCAGGATTTC