Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0116400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:921078:923630:-1 gene:Os01g0116400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os01t0116400-01)
Sequence	ATGGCTGGTGCGTTTCGTCGTTCTGCTGCCCTGCAGGCCATGGCTGCCTTCTCTGTGCTT GCACTTGTTGTACCAGATCAGGTTCAGGGGAGAGGCAAGTGCCCATCTTTCTCCTGCGGA CGTCTTAGCTATGTGCATTTCCCATTCCGTCGTCAAGGCGACCCCGCTGAATGTGGTGTT CCATCATATGAGCTGACTTGTGCAGACAGCAATGCTACAATTCAGATCGACAAGGCAACA TACTTGGTAACTGACATCAACTACAGTGATCAGTACTTCTGGGTGGTCGATGCAAGCTTG GATTCAGCTAACAACTGCCCTCTTCCTCGGTGGAGTCAGACTCCTTATAATGAAAACTAC AGGCTTGGAGAAGATTCACACCGCCGTGTCCAAGTCCAGTTGTCCCCTGATGTGGATTGG TTCGCTACCTTTGTGAAATGCTCGCAGGAAATGAATAGCAGCAATGTCATGTACAGGCCT GTGGCTTGCCGGAGCGGCAACTCTTCTTTCGTCTATGTGCTAACTGGTCTGGGATCTTAT TTAGCTGAGAACCTTGAGCCTTCCTGTGGATACCTGGCAATGACTCCTTTAGCTCTGGGT GGTCTAGAGAATTGGCGAACTGCTACTGCGGCTGCGACACTGGAGGATGTAAATTATGAA GATGTTGTCAGATCCATGAGTGAAGGATTCGCTGTTCGTTTTCCTTTCAGGTCTGGGGGA TTCATCGACTGCCTAAGGGGCTTGATCAGCGACAGTAATGGAGAACCGACAGTATATCGG ATCTTCGTCATTGTTACTAATATCAATTCTTACTTCTCGATATGCGGCCGCCATGCAACT CAACTTCCACACCCTTTTGTTGTGCTCCTGATGTTAGTGCCACAAACTTTCTGGATTTTA AGGGTCATTTCTGCATGCAGGTTCGTCCTGGTGATGCTGCTGATGTGGACCTCCGTTGCC TACATGTACTGGAAAATAAAGATGAGAGTTGATGAAGTAGAGAAGTTTCTGCAATTGCAA CAAATGCTGACCCCAACGAGATACTCCTACACCGACATTATTGCCATCACAAGTCATTAC AGAGACAAGCTTGGCCAAGGAGGATATGGCTCCGTCTACAAAGGTGTGCTACTCCCTGGT GATGTCCGAGTTGCCATTAAGATGCTGAAGGGTGACGCAAATTGCAAAGGGGAAGAGTTC ATCAGCGAGGTCTCCACCATTGGTAGGATCCACCATGTCAATGTGGTGCGACTCGTCGGG TTCTGCTCTGAAGAAATAAGAAGAGCGCTTGTGTACGAGTATATGCCTCAGGGTTCTCTT GACAAGTACATCTTCTCGTCTGAAAAGAGTTTCTCCTGGGATAAGCTAAATGAAATTGCA TTGGGCATTGCCAGAGGGATCAACTACCTGCATCATGGGTGTGATATGCAAATTCTACAC TTTGACATCAAACCGCACAACATCCTTCTTGACAACAACTTTGTCCCAAAAGTTGCCGAT TTTGGCCTTGCAAAGCTGTACCCAAGGGACAAGAGTTTTGTCCCAGTGAGCGCAGCACGA GGAACAGTGGGATACATAGCTCCTGAGATGATCTCTCGGGGTTTTGGTGCCATATCAAGC AAGTCCGATGTTTACAGCTTCGGGATGCTACTATTGGAGATGGCCGGAGGAAGAAGGAAT GCTGATCCGAATGCGGAGAATTCAAGCCAGGCATACTATCCATCACGAGTGTACCGTCAG CTGACCCGACAAGAAACAGGTGAGATCACCGCTGCCGCCGACATGCATGAGTTGGAGAAG AAGCTCTGCATCGTTGGATTGTGGTGCATCCAGATGAGGTCTTGTGACCGACCGATGATG AGCGAGGTGATAGAGATGCTTGAAGGTGGTGTTGATTGTTTGCAAATTCCTCCTAGGCCA TTCTTCTGTGACGATGACTACATCCCGGCAATGGAGTCGCTGTATCTGTCCTCCGAGGTG GAGCTGGCTGCAATCTCCGAGGAGGAAGACGAGAGTATCACTGAGTTGAATTAG

Peptide Sequence

PEP ID	Os01t0116400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:921078:923630:-1 gene:Os01g0116400 transcript:Os01t0116400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os01t0116400-01)
Sequence	MAGAFRRSAALQAMAAFSVLALVVPDQVQGRGKCPSFSCGRLSYVHFPFRRQGDPAECGV PSYELTCADSNATIQIDKATYLVTDINYSDQYFWVVDASLDSANNCPLPRWSQTPYNENY RLGEDSHRRVQVQLSPDVDWFATFVKCSQEMNSSNVMYRPVACRSGNSSFVYVLTGLGSY LAENLEPSCGYLAMTPLALGGLENWRTATAAATLEDVNYEDVVRSMSEGFAVRFPFRSGG FIDCLRGLISDSNGEPTVYRIFVIVTNINSYFSICGRHATQLPHPFVVLLMLVPQTFWIL RVISACRFVLVMLLMWTSVAYMYWKIKMRVDEVEKFLQLQQMLTPTRYSYTDIIAITSHY RDKLGQGGYGSVYKGVLLPGDVRVAIKMLKGDANCKGEEFISEVSTIGRIHHVNVVRLVG FCSEEIRRALVYEYMPQGSLDKYIFSSEKSFSWDKLNEIALGIARGINYLHHGCDMQILH FDIKPHNILLDNNFVPKVADFGLAKLYPRDKSFVPVSAARGTVGYIAPEMISRGFGAISS KSDVYSFGMLLLEMAGGRRNADPNAENSSQAYYPSRVYRQLTRQETGEITAAADMHELEK KLCIVGLWCIQMRSCDRPMMSEVIEMLEGGVDCLQIPPRPFFCDDDYIPAMESLYLSSEV ELAAISEEEDESITELN

Transcript Sequence

Transcript ID	Os01t0116400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:921078:923630:-1 gene:Os01g0116400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os01t0116400-01)
Sequence	ATTGTAATAGGCTTGTTTGCACTGCCTGTGAAGCTAGCTACCGTAGCGATGGCTGGTGCG TTTCGTCGTTCTGCTGCCCTGCAGGCCATGGCTGCCTTCTCTGTGCTTGCACTTGTTGTA CCAGATCAGGTTCAGGGGAGAGGCAAGTGCCCATCTTTCTCCTGCGGACGTCTTAGCTAT GTGCATTTCCCATTCCGTCGTCAAGGCGACCCCGCTGAATGTGGTGTTCCATCATATGAG CTGACTTGTGCAGACAGCAATGCTACAATTCAGATCGACAAGGCAACATACTTGGTAACT GACATCAACTACAGTGATCAGTACTTCTGGGTGGTCGATGCAAGCTTGGATTCAGCTAAC AACTGCCCTCTTCCTCGGTGGAGTCAGACTCCTTATAATGAAAACTACAGGCTTGGAGAA GATTCACACCGCCGTGTCCAAGTCCAGTTGTCCCCTGATGTGGATTGGTTCGCTACCTTT GTGAAATGCTCGCAGGAAATGAATAGCAGCAATGTCATGTACAGGCCTGTGGCTTGCCGG AGCGGCAACTCTTCTTTCGTCTATGTGCTAACTGGTCTGGGATCTTATTTAGCTGAGAAC CTTGAGCCTTCCTGTGGATACCTGGCAATGACTCCTTTAGCTCTGGGTGGTCTAGAGAAT TGGCGAACTGCTACTGCGGCTGCGACACTGGAGGATGTAAATTATGAAGATGTTGTCAGA TCCATGAGTGAAGGATTCGCTGTTCGTTTTCCTTTCAGGTCTGGGGGATTCATCGACTGC CTAAGGGGCTTGATCAGCGACAGTAATGGAGAACCGACAGTATATCGGATCTTCGTCATT GTTACTAATATCAATTCTTACTTCTCGATATGCGGCCGCCATGCAACTCAACTTCCACAC CCTTTTGTTGTGCTCCTGATGTTAGTGCCACAAACTTTCTGGATTTTAAGGGTCATTTCT GCATGCAGGTTCGTCCTGGTGATGCTGCTGATGTGGACCTCCGTTGCCTACATGTACTGG AAAATAAAGATGAGAGTTGATGAAGTAGAGAAGTTTCTGCAATTGCAACAAATGCTGACC CCAACGAGATACTCCTACACCGACATTATTGCCATCACAAGTCATTACAGAGACAAGCTT GGCCAAGGAGGATATGGCTCCGTCTACAAAGGTGTGCTACTCCCTGGTGATGTCCGAGTT GCCATTAAGATGCTGAAGGGTGACGCAAATTGCAAAGGGGAAGAGTTCATCAGCGAGGTC TCCACCATTGGTAGGATCCACCATGTCAATGTGGTGCGACTCGTCGGGTTCTGCTCTGAA GAAATAAGAAGAGCGCTTGTGTACGAGTATATGCCTCAGGGTTCTCTTGACAAGTACATC TTCTCGTCTGAAAAGAGTTTCTCCTGGGATAAGCTAAATGAAATTGCATTGGGCATTGCC AGAGGGATCAACTACCTGCATCATGGGTGTGATATGCAAATTCTACACTTTGACATCAAA CCGCACAACATCCTTCTTGACAACAACTTTGTCCCAAAAGTTGCCGATTTTGGCCTTGCA AAGCTGTACCCAAGGGACAAGAGTTTTGTCCCAGTGAGCGCAGCACGAGGAACAGTGGGA TACATAGCTCCTGAGATGATCTCTCGGGGTTTTGGTGCCATATCAAGCAAGTCCGATGTT TACAGCTTCGGGATGCTACTATTGGAGATGGCCGGAGGAAGAAGGAATGCTGATCCGAAT GCGGAGAATTCAAGCCAGGCATACTATCCATCACGAGTGTACCGTCAGCTGACCCGACAA GAAACAGGTGAGATCACCGCTGCCGCCGACATGCATGAGTTGGAGAAGAAGCTCTGCATC GTTGGATTGTGGTGCATCCAGATGAGGTCTTGTGACCGACCGATGATGAGCGAGGTGATA GAGATGCTTGAAGGTGGTGTTGATTGTTTGCAAATTCCTCCTAGGCCATTCTTCTGTGAC GATGACTACATCCCGGCAATGGAGTCGCTGTATCTGTCCTCCGAGGTGGAGCTGGCTGCA ATCTCCGAGGAGGAAGACGAGAGTATCACTGAGTTGAATTAGCTAGTACTAGCAAGTATG GTGTGTTGATGTCTTTTCGTGAGCAGGTTGTGCTCAAGCCTGTGATGATTGTAGACAGTC ACACAGATGCAGTTTCTATGCTCCTATTCCTATATTCCTGTAGAATGCGTATATGTGGGC TTGTACGATTTATTATCTTGTGCTTCATCTGTATGAATGCATGCAAAAATCGAGC