Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0116000-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:872458:874817:-1 gene:Os01g0116000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Tak Receptor-Like Kinase 3 description:Similar to Receptor-like protein kinase. (Os01t0116000-00)
Sequence

ATGGTGATTCCTGGTCCGTTCTTCCGTCGCTCGACTGCCCTGCAAGTTTTCTCTGTCCTG
TGTGTGCTTCGATTTGTCGTCCCAGATCCGGATATAGAATGGCCTTTAATTCATGGAATA
CCTGCATGCCCTCCGTTCACCTGCGGCCATCTTAGCAAAGTCGCGTCTCCTTTCCACCGG
CGAGGCTACGAGTGCGGTGTTGCATCGTATGAGCTGACTTGCACCGATGACAAGGCTACA
ATTCAGATCGACAACGGAACATACTTTGTGACAGGCATCGACTACAGTGATTCCACCTTC
TGGGTTGTCGACGCCAACATCTCGGATTCACGTAACAATTGCCCTCTTCCTCGCTGGAAA
CGCATTCCTTATTACTATGATGATGTTAGTAGTGACGACGAAGAATCATCGCCATACAAC
ATCCAAGTCGAATTGGACCCTGCTTCACGTTGGTGGTCTTTCTTTGTCAACTGTTCCAAG
GAAATAAACAACAATGTTATGTACAGTCCTGTTGCTTGCATGGGCACCAGCAGCTCCTTC
GTTTATGTCTTGACTGGCAGATTGTCCTGTTACATTGAAAACCTCGAGCCTTCCTGTGGT
TACCTAGCCATGACTCCTTTGGATGGTATGGGTCGTGTAGCACCAGCAGTTGATAGCTTA
AGTTATGAAGACGTAGTAAAATTCATGAGGAAAGGATTCCGCGTCCAATTTCCTTTCAGA
CACCATAGAAATCGAAGCTTCAAGGATTGCCTAATGGAGTCGATTCCCAAATCGACTGGT
ATAGGCAAACTTTCAGATTGGTTTAGTCTTTCGGTGACTGAAAATTTCATGGATTGCGCA
ACTGCTAAAATTCCATCGCCATACAATATACTCTTGGGCATAATATTGTATGCCTTGATG
TTCTGGACGATGCTTGCACCACCATGCAGGTATCTGTTGGCACCCTTGGTTGTATTGATT
TTCCTTGCACAAAAGTACTTGAAAAGAATGATAACAATTGATGCAGTCGAGAAATTTCTC
CGAATGCAACAAATGCTCGGTCCGACAAGGTATGCCTACACCGACATTATCGCAATCACA
GGGCATTTCAGAGAAAAGTTGGGCCAAGGAGGCTACGGTTCTGTATACAAGGGTGTGCTG
CTCCCGGGTGATCTCCATGTGGCTATCAAGATACTGAATGGCTACTCTAATTGCAACGGC
GAAGAATTCATCAGTGAAGTTGCCACCATTGGTAGGATTCACCATGTTAATGTTGTGCGT
TTGGTGGGGTTCTGCTCCGAGGAAATGAGAAGGGCCTTGGTTTACGAGTACATGCCTAGG
GGATCTCTAGACAAACACATCTTCTCATCTGAGAGAAGATTCTCATGGGACAAGCTCAAT
GAGATTGCTCTAGGCATTGCTAGGGGGATCAACTACCTGCACCAAGGGTGTGATATGCAG
ATTCTACACTTTGACATCAAGCCACACAACATCCTTCTTGATGATAACTTTGTTCCAAAA
GTTGCTGATTTCGGCCTCGCTAAACTGTACCCAAGGGACAAGAGCTTTGTGTCAGATAGG
GCTTTACGAGGAACAGTGGGTTATATGGCTCCTGAGATGGTTTCCCGGAGCTTTGGCATC
ATATCTGGCAAGTCTGATGTTTACAGTTTTGGAATGTTGCTGCTTGAGATGGTCGGAGGA
CGAAGGAATGCAGATCCAAATGCAGATTCCAGTGCAAGTAAGGCATACTACCCATCATGG
GTTTATGATAAGCTAATAGCAGATCAACAAGTTGATGAGATATCCAACTTTGCCAACATG
CATGAGCTAGAGAGGAAGTTGTGCCTTGTTGGGCTGTGGTGCATTCAGATGAAATCACAC
GATCGGCCGACGATGAGTGAGGCAATAGAGATGCTCGAAGGGGGTGTGGATGCGCTGCAA
GTGCCTCTGAGACCATTTTTCTGCGATGGGGATGGCATGCCACCTCCACAAGTCATGGAT
TCTTACTTTCACTCCTCCGATCTTTCTGCAATTTCAGAAGAGGACGATGGAATAGCTGAA
TTAGCCAGTAGTTAG

Peptide Sequence

PEP ID

Os01t0116000-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:872458:874817:-1 gene:Os01g0116000 transcript:Os01t0116000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Tak Receptor-Like Kinase 3 description:Similar to Receptor-like protein kinase. (Os01t0116000-00)
Sequence

MVIPGPFFRRSTALQVFSVLCVLRFVVPDPDIEWPLIHGIPACPPFTCGHLSKVASPFHR
RGYECGVASYELTCTDDKATIQIDNGTYFVTGIDYSDSTFWVVDANISDSRNNCPLPRWK
RIPYYYDDVSSDDEESSPYNIQVELDPASRWWSFFVNCSKEINNNVMYSPVACMGTSSSF
VYVLTGRLSCYIENLEPSCGYLAMTPLDGMGRVAPAVDSLSYEDVVKFMRKGFRVQFPFR
HHRNRSFKDCLMESIPKSTGIGKLSDWFSLSVTENFMDCATAKIPSPYNILLGIILYALM
FWTMLAPPCRYLLAPLVVLIFLAQKYLKRMITIDAVEKFLRMQQMLGPTRYAYTDIIAIT
GHFREKLGQGGYGSVYKGVLLPGDLHVAIKILNGYSNCNGEEFISEVATIGRIHHVNVVR
LVGFCSEEMRRALVYEYMPRGSLDKHIFSSERRFSWDKLNEIALGIARGINYLHQGCDMQ
ILHFDIKPHNILLDDNFVPKVADFGLAKLYPRDKSFVSDRALRGTVGYMAPEMVSRSFGI
ISGKSDVYSFGMLLLEMVGGRRNADPNADSSASKAYYPSWVYDKLIADQQVDEISNFANM
HELERKLCLVGLWCIQMKSHDRPTMSEAIEMLEGGVDALQVPLRPFFCDGDGMPPPQVMD
SYFHSSDLSAISEEDDGIAELASS

Transcript Sequence

Transcript ID

Os01t0116000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:872458:874817:-1 gene:Os01g0116000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Tak Receptor-Like Kinase 3 description:Similar to Receptor-like protein kinase. (Os01t0116000-00)
Sequence

ATGGTGATTCCTGGTCCGTTCTTCCGTCGCTCGACTGCCCTGCAAGTTTTCTCTGTCCTG
TGTGTGCTTCGATTTGTCGTCCCAGATCCGGATATAGAATGGCCTTTAATTCATGGAATA
CCTGCATGCCCTCCGTTCACCTGCGGCCATCTTAGCAAAGTCGCGTCTCCTTTCCACCGG
CGAGGCTACGAGTGCGGTGTTGCATCGTATGAGCTGACTTGCACCGATGACAAGGCTACA
ATTCAGATCGACAACGGAACATACTTTGTGACAGGCATCGACTACAGTGATTCCACCTTC
TGGGTTGTCGACGCCAACATCTCGGATTCACGTAACAATTGCCCTCTTCCTCGCTGGAAA
CGCATTCCTTATTACTATGATGATGTTAGTAGTGACGACGAAGAATCATCGCCATACAAC
ATCCAAGTCGAATTGGACCCTGCTTCACGTTGGTGGTCTTTCTTTGTCAACTGTTCCAAG
GAAATAAACAACAATGTTATGTACAGTCCTGTTGCTTGCATGGGCACCAGCAGCTCCTTC
GTTTATGTCTTGACTGGCAGATTGTCCTGTTACATTGAAAACCTCGAGCCTTCCTGTGGT
TACCTAGCCATGACTCCTTTGGATGGTATGGGTCGTGTAGCACCAGCAGTTGATAGCTTA
AGTTATGAAGACGTAGTAAAATTCATGAGGAAAGGATTCCGCGTCCAATTTCCTTTCAGA
CACCATAGAAATCGAAGCTTCAAGGATTGCCTAATGGAGTCGATTCCCAAATCGACTGGT
ATAGGCAAACTTTCAGATTGGTTTAGTCTTTCGGTGACTGAAAATTTCATGGATTGCGCA
ACTGCTAAAATTCCATCGCCATACAATATACTCTTGGGCATAATATTGTATGCCTTGATG
TTCTGGACGATGCTTGCACCACCATGCAGGTATCTGTTGGCACCCTTGGTTGTATTGATT
TTCCTTGCACAAAAGTACTTGAAAAGAATGATAACAATTGATGCAGTCGAGAAATTTCTC
CGAATGCAACAAATGCTCGGTCCGACAAGGTATGCCTACACCGACATTATCGCAATCACA
GGGCATTTCAGAGAAAAGTTGGGCCAAGGAGGCTACGGTTCTGTATACAAGGGTGTGCTG
CTCCCGGGTGATCTCCATGTGGCTATCAAGATACTGAATGGCTACTCTAATTGCAACGGC
GAAGAATTCATCAGTGAAGTTGCCACCATTGGTAGGATTCACCATGTTAATGTTGTGCGT
TTGGTGGGGTTCTGCTCCGAGGAAATGAGAAGGGCCTTGGTTTACGAGTACATGCCTAGG
GGATCTCTAGACAAACACATCTTCTCATCTGAGAGAAGATTCTCATGGGACAAGCTCAAT
GAGATTGCTCTAGGCATTGCTAGGGGGATCAACTACCTGCACCAAGGGTGTGATATGCAG
ATTCTACACTTTGACATCAAGCCACACAACATCCTTCTTGATGATAACTTTGTTCCAAAA
GTTGCTGATTTCGGCCTCGCTAAACTGTACCCAAGGGACAAGAGCTTTGTGTCAGATAGG
GCTTTACGAGGAACAGTGGGTTATATGGCTCCTGAGATGGTTTCCCGGAGCTTTGGCATC
ATATCTGGCAAGTCTGATGTTTACAGTTTTGGAATGTTGCTGCTTGAGATGGTCGGAGGA
CGAAGGAATGCAGATCCAAATGCAGATTCCAGTGCAAGTAAGGCATACTACCCATCATGG
GTTTATGATAAGCTAATAGCAGATCAACAAGTTGATGAGATATCCAACTTTGCCAACATG
CATGAGCTAGAGAGGAAGTTGTGCCTTGTTGGGCTGTGGTGCATTCAGATGAAATCACAC
GATCGGCCGACGATGAGTGAGGCAATAGAGATGCTCGAAGGGGGTGTGGATGCGCTGCAA
GTGCCTCTGAGACCATTTTTCTGCGATGGGGATGGCATGCCACCTCCACAAGTCATGGAT
TCTTACTTTCACTCCTCCGATCTTTCTGCAATTTCAGAAGAGGACGATGGAATAGCTGAA
TTAGCCAGTAGTTAGGCTGTGATGAAAATGATGTATCT