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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0115600-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:843530:847399:1 gene:Os01g0115600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 11 description:Similar to LRK14. (Os01t0115600-01)
Sequence

ATGGACTTGCCAAAACTTCTCTTCACAGTACTCATACTCTCTCTTCTCAACTACGAATCC
TCTTCCGCCACAGCATGGGATGATGAAGATTTCTTCAAGACTTGCTCATCACACAGGTGC
AGCAAGCATGGACCAGAGATCAGGTTCCCTTTCCGGCTCTCGACACAACCTCCATCATGC
GGCGCACCCGGCATGCACTTGTCATGCTCTGGACAGGACACCATCCTCAATCACCCAGTT
CTTGGTCCCTGCAAAGTAACCGAGATAAGTTACAGTTATGCTACCATGAACGTCATCCCA
CCTGTAGATTCCTCACCTCACTGCCCACTTCAGAAGCTCATGTCGAAAAACCAATCAACT
TCTGTGTACAAACCTCAAGGTCCTCAATCGCAGGGAGCTACCCTTGTAGTTTGTTCAAGA
GATCCCATACCTGCAAATCAATACGACATAGTTGGCCCAATATCTTGCCTCGGCCATAAT
AACCAGTTCTGGTATTTGGCAGATCCCTATACATACATGTCTGTTCTTCCCTTGGACTGC
ACAGTTATTTCTAAAGGCATCCCAATGCCCTATAGTTATGATAAAAAAGGGAGAATAAAC
TGGGACACCTCAAACTTCAAGGAAACAGCAAATAGAGTCATCAACGATGGTGAGACAGTA
TTCATGTGGTACTCTAGTAACATTACTAGTATTTGCCAACGATGTGAATATGAAGGCCGA
CCCTGTGGTTTCAGTTCACAAAGTGGTCAAGCATTCTGTCGGCGTCATGGACCGCGGGTC
ACTCTTGTTGCAGCTACATCATCTGTAGCCACATTTGTAATTCTTTCATTAGTTGTGGCC
ACTGCATTCTACATCTCCTTAAAGTCAAGGTACAACAAAGAGATACATTTGAAAGTTGAA
ATGTTTCTCAAGACATATGGCACATCCAAGCCCATGAGGTACACTTTCTCCGATGTTAAG
AAAATAACAAGACGGTTCAAGAATAAATTAGGCCATGGTGGATTTGGAAGTGTCTACAAA
GGTGAGCTACCAAATGGAGTTCCTGTGGCAGTCAAGATGCTAGAGAACTCCTTAGGAGAG
GGAGAAGAGTTCATCAATGAAGTTGCGACCATTGGGAGAATTCACCATGCAAACATCGTC
CGTCTCCTAGGATTTTGCTCTGAAGGAACACGACGGGCTTTAATATATGAATTCATGCCC
AATGAATCGTTGGAGAAATATATATTCTCAAATGGTTCTAATATTTCAAGAGAATTCCTA
GTACCAAAGAAAATGCTAGATATTGCTTTAGGCATCGCCCGAGGAATGGAGTACTTGCAC
CAAGGGTGCAATCAGCGCATTCTCCATTTTGACATCAAGCCTCACAACATATTGTTGGAC
TACAGCTTCAGTCCAAAGATCTCAGACTTTGGGCTTGCAAAGTTGTGCGCAAGAGATCAA
AGCATTGTCACATTAACTGCAGCAAGGGGCACGATGGGTTATATTGCACCAGAACTATAT
TCTCGGAGTTTTGGAGCAATATCATACAAGTCGGATGTCTACAGTTTCGGCATGCTGGTG
TTAGAAATGGTGAGTGGGAGGAGGAACACAGACCCAACCGTTGAGAACCAAAATGAGTTC
TACTTTCCTGAGTGGATATATGAGAGAGTAATCAATGGGCAGGAACTGGTGCTTAACATG
GAGACAACACAAGGGGAGAAAGAAACGGTTAGACAGCTAGCCATTGTAGCGTTATGGTGC
ATTCAGTGGAACCCAACAAACCGGCCCTCGATGACAAAGGTAGTAAACATGTTAACGGGG
AGGTTGCAGAAACTACAGGTGCCGCCTAAGCCCTTCATTTCGTCTGAAAATCATCTTGCG
ACTTAG

Peptide Sequence

PEP ID

Os01t0115600-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:843530:847399:1 gene:Os01g0115600 transcript:Os01t0115600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 11 description:Similar to LRK14. (Os01t0115600-01)
Sequence

MDLPKLLFTVLILSLLNYESSSATAWDDEDFFKTCSSHRCSKHGPEIRFPFRLSTQPPSC
GAPGMHLSCSGQDTILNHPVLGPCKVTEISYSYATMNVIPPVDSSPHCPLQKLMSKNQST
SVYKPQGPQSQGATLVVCSRDPIPANQYDIVGPISCLGHNNQFWYLADPYTYMSVLPLDC
TVISKGIPMPYSYDKKGRINWDTSNFKETANRVINDGETVFMWYSSNITSICQRCEYEGR
PCGFSSQSGQAFCRRHGPRVTLVAATSSVATFVILSLVVATAFYISLKSRYNKEIHLKVE
MFLKTYGTSKPMRYTFSDVKKITRRFKNKLGHGGFGSVYKGELPNGVPVAVKMLENSLGE
GEEFINEVATIGRIHHANIVRLLGFCSEGTRRALIYEFMPNESLEKYIFSNGSNISREFL
VPKKMLDIALGIARGMEYLHQGCNQRILHFDIKPHNILLDYSFSPKISDFGLAKLCARDQ
SIVTLTAARGTMGYIAPELYSRSFGAISYKSDVYSFGMLVLEMVSGRRNTDPTVENQNEF
YFPEWIYERVINGQELVLNMETTQGEKETVRQLAIVALWCIQWNPTNRPSMTKVVNMLTG
RLQKLQVPPKPFISSENHLAT

Transcript Sequence

Transcript ID

Os01t0115600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:843530:847399:1 gene:Os01g0115600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 11 description:Similar to LRK14. (Os01t0115600-01)
Sequence

GCCATTACACTCCATGGACTTGCCAAAACTTCTCTTCACAGTACTCATACTCTCTCTTCT
CAACTACGAATCCTCTTCCGCCACAGCATGGGATGATGAAGATTTCTTCAAGACTTGCTC
ATCACACAGGTGCAGCAAGCATGGACCAGAGATCAGGTTCCCTTTCCGGCTCTCGACACA
ACCTCCATCATGCGGCGCACCCGGCATGCACTTGTCATGCTCTGGACAGGACACCATCCT
CAATCACCCAGTTCTTGGTCCCTGCAAAGTAACCGAGATAAGTTACAGTTATGCTACCAT
GAACGTCATCCCACCTGTAGATTCCTCACCTCACTGCCCACTTCAGAAGCTCATGTCGAA
AAACCAATCAACTTCTGTGTACAAACCTCAAGGTCCTCAATCGCAGGGAGCTACCCTTGT
AGTTTGTTCAAGAGATCCCATACCTGCAAATCAATACGACATAGTTGGCCCAATATCTTG
CCTCGGCCATAATAACCAGTTCTGGTATTTGGCAGATCCCTATACATACATGTCTGTTCT
TCCCTTGGACTGCACAGTTATTTCTAAAGGCATCCCAATGCCCTATAGTTATGATAAAAA
AGGGAGAATAAACTGGGACACCTCAAACTTCAAGGAAACAGCAAATAGAGTCATCAACGA
TGGTGAGACAGTATTCATGTGGTACTCTAGTAACATTACTAGTATTTGCCAACGATGTGA
ATATGAAGGCCGACCCTGTGGTTTCAGTTCACAAAGTGGTCAAGCATTCTGTCGGCGTCA
TGGACCGCGGGTCACTCTTGTTGCAGCTACATCATCTGTAGCCACATTTGTAATTCTTTC
ATTAGTTGTGGCCACTGCATTCTACATCTCCTTAAAGTCAAGGTACAACAAAGAGATACA
TTTGAAAGTTGAAATGTTTCTCAAGACATATGGCACATCCAAGCCCATGAGGTACACTTT
CTCCGATGTTAAGAAAATAACAAGACGGTTCAAGAATAAATTAGGCCATGGTGGATTTGG
AAGTGTCTACAAAGGTGAGCTACCAAATGGAGTTCCTGTGGCAGTCAAGATGCTAGAGAA
CTCCTTAGGAGAGGGAGAAGAGTTCATCAATGAAGTTGCGACCATTGGGAGAATTCACCA
TGCAAACATCGTCCGTCTCCTAGGATTTTGCTCTGAAGGAACACGACGGGCTTTAATATA
TGAATTCATGCCCAATGAATCGTTGGAGAAATATATATTCTCAAATGGTTCTAATATTTC
AAGAGAATTCCTAGTACCAAAGAAAATGCTAGATATTGCTTTAGGCATCGCCCGAGGAAT
GGAGTACTTGCACCAAGGGTGCAATCAGCGCATTCTCCATTTTGACATCAAGCCTCACAA
CATATTGTTGGACTACAGCTTCAGTCCAAAGATCTCAGACTTTGGGCTTGCAAAGTTGTG
CGCAAGAGATCAAAGCATTGTCACATTAACTGCAGCAAGGGGCACGATGGGTTATATTGC
ACCAGAACTATATTCTCGGAGTTTTGGAGCAATATCATACAAGTCGGATGTCTACAGTTT
CGGCATGCTGGTGTTAGAAATGGTGAGTGGGAGGAGGAACACAGACCCAACCGTTGAGAA
CCAAAATGAGTTCTACTTTCCTGAGTGGATATATGAGAGAGTAATCAATGGGCAGGAACT
GGTGCTTAACATGGAGACAACACAAGGGGAGAAAGAAACGGTTAGACAGCTAGCCATTGT
AGCGTTATGGTGCATTCAGTGGAACCCAACAAACCGGCCCTCGATGACAAAGGTAGTAAA
CATGTTAACGGGGAGGTTGCAGAAACTACAGGTGCCGCCTAAGCCCTTCATTTCGTCTGA
AAATCATCTTGCGACTTAGATCATGGAAACACAATTCCATGGTTTAGAGATATGTTTGAT
CGATCCGTAGCTTGTATGTATGGTGTAAGATTATTCAACTATATTGTGCTATCAGACATA
TGGTATATGTATTCATGCAATTCT