Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0113700-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:742860:745177:-1 gene:Os01g0113700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Receptor-like kinase. (Os01t0113700-00)
Sequence

ATGCATCCCCTCTCTACCACAATGCAAGCCTTTGTTTTCATCTTTGCTGTTCTTGCTCTT
CTTGCAGGAGATGTCGAGGGGCGGCAAGGGTGCTATCCTTTCTCCTGTGGACATCTCCAG
AACATTTCTCATCCTTTCCGCCGGCGAGGTGATCCACAAAGATGCGGTGTTCCGTCATAT
GAGTTAGACTGCAGAGATAGCAAGGCTACCATTAGGATCAACACAGGGACATACTATGTA
ACCAGCATCAACTACACTACTTCTGTCTTCTGGGTTGTGGATGCCAGCCTAAAAGATACA
AACAGCAGCTGCCCTCTTCCTCGCTCGGATCAGCTTCCTTTCGTTTCGGGGGGTATCCAG
GGATCACATGGCGGCTGGGACCTGGCCCTTGACCCTGGACCTGGAGCTACATGGGTTAGC
TTTGTGAATTGTTCACAGGCAGTAAGGAATAATAGTGTGTACGTTCCTGTTGATTGCCTG
AGCACAAGCTCTTCGTTTGTTTATGTGTTTGGTTCCTGGATAATGCCTCCATCTGTTTTT
CCAATCATCGGAAACCTTGAGACTTCATGTCGCTACCTTGCCATGATTCCCTTGGGTGGT
TGGGACTCGCCATTGCCACATAATGCAAGCTTTTCAGACATCGTCAGATCCATGAGGAAT
GGATTTGCTGTTCATTTTCCCATAATACATAGGTGGAGTAGGATTGGGCACATCAAGGAT
TGTCTGATGGGGTCGATTCGGGGCTTTCATGAAGAACCATTGTCCAATCAAACCATCAAG
GATCAGATTGTGGACATCCTTTTTATTGACTTTAGTTTCTGGTCCTGCATAATTGGAGGA
GTGGGCATGAAAGATTATTTCGATATGCCACAATACATGATGGGGATGCTTCGTGGAAAA
ATAGAATTTTATGGCGGATTCATTGTACAATTTGCTTTGTTTGTTTTCAAGTGGATTGCT
GTTTTATGCAGGTTCGTGATAGCTCCGTTGACACTATTGACCTTCCTTGCCTTCAAGTAT
TGGAAAACTAGAATAAAAATCGACGCAGTTGAGAAGTTTTTACAAATGCAGCTGATGCTT
GGTCCAACAAGGTACGCCTACACAGACATCATTGCAATGACAAGCCATTTTAGAGACAAG
TTGGGCCAGGGTGGCTATGGCTCCGTGTTCAAGGGAGTGATACTGCCTGGTGATGTCCAT
GTTGCCATCAAAATGCTATCCAACTACAATTGTAATGGAGAAGAATTCATCAGCGAGGTA
TCCACCATTGGCAGTATCCATCATGTCAATGTAGTACGTCTAGTGGGGTATTGTGCAGAG
GAAATGAGGAGTGCACTTGTGTATGAGTACATGCCCCATGGATCTCTTGACAGGTTCATC
TTCTCTCCTGACAAGAGTCTCTCTTGGGACAAGCTCAATGAGATCGCATTGGGCATTGCT
AGAGGAATAAACTACTTACATCAGGGGTGTGATATGCAGATTCTACATTTTGATATCAAG
CCGCACAACATCCTTCTTGATAGCAATTTTGTCCCAAAAGTTGCCGATTTTGGCCTTGCC
AAACTGTACCCACGGGATAACAGTTTTATGCCAGTTAGCGCTGCACGAGGAACAGTAGGT
TATATTGCTCCTGAGATGATATCTCGGAGCTTTGGTATCATATCTAGCAAATCTGATGTT
TATAGCTTTGGAATGCTTCTGTTGGAGATGGCTGGAGGGCGAAGGAATTCTAAGCAGAAC
ATGTCGAGCTCAAGCCAGTCATATTATCCATCTTGGGTGTATAATCAGCTGGTTCAACAA
AAGATGGGTGAGATTGCCAATGCCTTCAATATGCATGAGCTGGAAAAGAAGTTGTGTGTT
GTTGGTCTACATTGCATTCAAATGAAGTCTCATGATCGTCCAACGATGAGTGAGGTCATA
GAAATGCTTGAAGGTGATGTTGGTGGTCTGCAGCTGCCTTCAAGGCCATTCTTCTGCGAT
GATGAACCCCTGCCACTGCTAGTGGATTCTTGCCGTTTCTCCTCTGAACTAACTGAAATC
TCAGAGGAGGATGAGTGA

Peptide Sequence

PEP ID

Os01t0113700-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:742860:745177:-1 gene:Os01g0113700 transcript:Os01t0113700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Receptor-like kinase. (Os01t0113700-00)
Sequence

MHPLSTTMQAFVFIFAVLALLAGDVEGRQGCYPFSCGHLQNISHPFRRRGDPQRCGVPSY
ELDCRDSKATIRINTGTYYVTSINYTTSVFWVVDASLKDTNSSCPLPRSDQLPFVSGGIQ
GSHGGWDLALDPGPGATWVSFVNCSQAVRNNSVYVPVDCLSTSSSFVYVFGSWIMPPSVF
PIIGNLETSCRYLAMIPLGGWDSPLPHNASFSDIVRSMRNGFAVHFPIIHRWSRIGHIKD
CLMGSIRGFHEEPLSNQTIKDQIVDILFIDFSFWSCIIGGVGMKDYFDMPQYMMGMLRGK
IEFYGGFIVQFALFVFKWIAVLCRFVIAPLTLLTFLAFKYWKTRIKIDAVEKFLQMQLML
GPTRYAYTDIIAMTSHFRDKLGQGGYGSVFKGVILPGDVHVAIKMLSNYNCNGEEFISEV
STIGSIHHVNVVRLVGYCAEEMRSALVYEYMPHGSLDRFIFSPDKSLSWDKLNEIALGIA
RGINYLHQGCDMQILHFDIKPHNILLDSNFVPKVADFGLAKLYPRDNSFMPVSAARGTVG
YIAPEMISRSFGIISSKSDVYSFGMLLLEMAGGRRNSKQNMSSSSQSYYPSWVYNQLVQQ
KMGEIANAFNMHELEKKLCVVGLHCIQMKSHDRPTMSEVIEMLEGDVGGLQLPSRPFFCD
DEPLPLLVDSCRFSSELTEISEEDE

Transcript Sequence

Transcript ID

Os01t0113700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:742860:745177:-1 gene:Os01g0113700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Receptor-like kinase. (Os01t0113700-00)
Sequence

ATGCATCCCCTCTCTACCACAATGCAAGCCTTTGTTTTCATCTTTGCTGTTCTTGCTCTT
CTTGCAGGAGATGTCGAGGGGCGGCAAGGGTGCTATCCTTTCTCCTGTGGACATCTCCAG
AACATTTCTCATCCTTTCCGCCGGCGAGGTGATCCACAAAGATGCGGTGTTCCGTCATAT
GAGTTAGACTGCAGAGATAGCAAGGCTACCATTAGGATCAACACAGGGACATACTATGTA
ACCAGCATCAACTACACTACTTCTGTCTTCTGGGTTGTGGATGCCAGCCTAAAAGATACA
AACAGCAGCTGCCCTCTTCCTCGCTCGGATCAGCTTCCTTTCGTTTCGGGGGGTATCCAG
GGATCACATGGCGGCTGGGACCTGGCCCTTGACCCTGGACCTGGAGCTACATGGGTTAGC
TTTGTGAATTGTTCACAGGCAGTAAGGAATAATAGTGTGTACGTTCCTGTTGATTGCCTG
AGCACAAGCTCTTCGTTTGTTTATGTGTTTGGTTCCTGGATAATGCCTCCATCTGTTTTT
CCAATCATCGGAAACCTTGAGACTTCATGTCGCTACCTTGCCATGATTCCCTTGGGTGGT
TGGGACTCGCCATTGCCACATAATGCAAGCTTTTCAGACATCGTCAGATCCATGAGGAAT
GGATTTGCTGTTCATTTTCCCATAATACATAGGTGGAGTAGGATTGGGCACATCAAGGAT
TGTCTGATGGGGTCGATTCGGGGCTTTCATGAAGAACCATTGTCCAATCAAACCATCAAG
GATCAGATTGTGGACATCCTTTTTATTGACTTTAGTTTCTGGTCCTGCATAATTGGAGGA
GTGGGCATGAAAGATTATTTCGATATGCCACAATACATGATGGGGATGCTTCGTGGAAAA
ATAGAATTTTATGGCGGATTCATTGTACAATTTGCTTTGTTTGTTTTCAAGTGGATTGCT
GTTTTATGCAGGTTCGTGATAGCTCCGTTGACACTATTGACCTTCCTTGCCTTCAAGTAT
TGGAAAACTAGAATAAAAATCGACGCAGTTGAGAAGTTTTTACAAATGCAGCTGATGCTT
GGTCCAACAAGGTACGCCTACACAGACATCATTGCAATGACAAGCCATTTTAGAGACAAG
TTGGGCCAGGGTGGCTATGGCTCCGTGTTCAAGGGAGTGATACTGCCTGGTGATGTCCAT
GTTGCCATCAAAATGCTATCCAACTACAATTGTAATGGAGAAGAATTCATCAGCGAGGTA
TCCACCATTGGCAGTATCCATCATGTCAATGTAGTACGTCTAGTGGGGTATTGTGCAGAG
GAAATGAGGAGTGCACTTGTGTATGAGTACATGCCCCATGGATCTCTTGACAGGTTCATC
TTCTCTCCTGACAAGAGTCTCTCTTGGGACAAGCTCAATGAGATCGCATTGGGCATTGCT
AGAGGAATAAACTACTTACATCAGGGGTGTGATATGCAGATTCTACATTTTGATATCAAG
CCGCACAACATCCTTCTTGATAGCAATTTTGTCCCAAAAGTTGCCGATTTTGGCCTTGCC
AAACTGTACCCACGGGATAACAGTTTTATGCCAGTTAGCGCTGCACGAGGAACAGTAGGT
TATATTGCTCCTGAGATGATATCTCGGAGCTTTGGTATCATATCTAGCAAATCTGATGTT
TATAGCTTTGGAATGCTTCTGTTGGAGATGGCTGGAGGGCGAAGGAATTCTAAGCAGAAC
ATGTCGAGCTCAAGCCAGTCATATTATCCATCTTGGGTGTATAATCAGCTGGTTCAACAA
AAGATGGGTGAGATTGCCAATGCCTTCAATATGCATGAGCTGGAAAAGAAGTTGTGTGTT
GTTGGTCTACATTGCATTCAAATGAAGTCTCATGATCGTCCAACGATGAGTGAGGTCATA
GAAATGCTTGAAGGTGATGTTGGTGGTCTGCAGCTGCCTTCAAGGCCATTCTTCTGCGAT
GATGAACCCCTGCCACTGCTAGTGGATTCTTGCCGTTTCTCCTCTGAACTAACTGAAATC
TCAGAGGAGGATGAGTGAAGCTTGTGCATGTGCTTTGAT