Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0113650-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:738908:740898:1 gene:Os01g0113650 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0113650-00)
Sequence

ATGGCAGCGGGGAGTACCATCAGTACTAGTCGCCGCACTCACCACCTTGTGACTCTGCTG
CTCCTCGTTGCCGCCAGCACCAACTACGCCGCCGGAGCCACGCTGAACATCACCAACCGA
TGCTCCTTCACCGTGTGGCCGGCCGCCGTGCCGGTGGGTGGCGGCATGCGGCTCGACCCA
GGCGAGTCGTGGGCGCTCGACGTGCCCGCCAACAGCGGCGCAGGGCGTGTGTGGGCGCGC
ACAGGCTGCTCATTCGATGCCAATGGCAACGGATCGTGCCAGACGGGAGACTGCGGCGGC
GTGCTCAAGTGCAAGAACAGCGGCAAGCCACCTCAGACGCTCGCTGAGTTCACGGTGGAC
CAGACCAGCGTACAGGATTTCTTCGACATCTCCCTCACCGACGGCTTCAACGTGCCCATG
GACTTCCTCCCCGTGCCGGCTCCGGAGCAGAGGCACGGAGCACCACCGTGCAGCAAGGGG
CCACGCTGCCCGGCCAACATCACGTCGCAGTGCCCCAGCGAGCTCAAGGCGCCTGGAGGC
TGCAACAGCGCCTGCAATGTGTTCAAGCAAGACAAATACTGCTGCACTGGCACCACTGGC
ACCAAAACCTGCGAACCCACCACCTTCTCACTGCCATTCGTCAGGATGTGCCCTGACGCA
TATAGCTACAGTTTGGATGACAGCTCCAGCACTACATTCACTTGCCCGTCAGGGACAAAC
TACCAGATCATCTTCTGCCCTCCAACTGATCTCACGTCTTCATCTCCGGTTCCTCCTCCT
GCACCTATTGCTATTGGGCCTTCAGGCTTGGATTCCTCATCCAAAAGAGGAGGAAGGCTT
GTTGCCACTATCGTGGTCTCTGTGATCGGCTCTACTTCAGTACTCACCATTATCATCGCT
TCCATCATTATCATCAAACGAAGAATACGAAGACACCAGGAGATGCAAGAAGAGGAACAA
GAGTTTGAGGAGCTACCCCTTCAAGGAATGCCGAGGAGGTTCACATTTCAGCAGCTACAA
GAAGCAACTGATCAATTCAGAGACAAGCTCGGTCAAGGGGGGTTTGGGTCTGTTTTCCTG
GGACAGATTGGAGGTGAAAGAGTAGCGGTGAAACGCTTGGATCAAAGTGGTCAGGGAATG
AGAGAATTTATGGCAGAGGTTCAGACAATCGGCAGCATTCACCATATCAATCTAGTGAGG
CTGATTGGCTTCTGTGCAGAGAAATCACAAAGGCTTTTGGTTTATGAGCATATGCCCAAA
GGATCCTTGGACAGGTGGCTCTATCACCAGCAAGGTTCTCCTGCTCCTGCTCTAGATTGG
TGGACACGATACAAGATTATTACTCAAGTAGCCAAGGGTCTCTCTTATCTTCATGAGGAG
TGCATGATGAGAATTGCTCACTTAGATGTAAAACCACAAAATATCCTCCTAGACGACAAC
TTCAATGCTAAACTTTCTGATTTTGGTCTATGCAAGCTTATTGATCGAGATAAGAGTCAA
GTGATTACCAGAATGAGAGGCACACCTGGATATTTAGCTCCAGAATGGCTGACATCGCAG
ATCACAGAAAAGGCAGATGTCTATAGCTTTGGCATAGTAGTCATGGAAATGATCAGTGGG
AGAAAGAACCTTGACACTTCCAGGTCTGAACAGAGTATCCATCTAATTACCTTACTGCAA
GAAAAGGTGAAGGGTGATCAGTTGGCAGATTTGATTGACAAGCACAGCAATGATATGCAA
GTACACCGGCAAGAAATAATTGAGATGATGAAACTCGCAATGTGGTGTTTGCAGATTGAT
TGCAAAAGAAGGCCTCAAATGTCTGAGGTTGTCAAAGTTTTGGAAGGCACCACAAGTATT
GAGACTGACATAGACCATGACTTCGTCGCAACAAATCCAGTAAGCTTTGGTGTTGCTGGA
ATTGTGGACTCCGACCCCCCTGTAGCATCTAATTTATCAGGCCCCAGGTGA

Peptide Sequence

PEP ID

Os01t0113650-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:738908:740898:1 gene:Os01g0113650 transcript:Os01t0113650-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0113650-00)
Sequence

MAAGSTISTSRRTHHLVTLLLLVAASTNYAAGATLNITNRCSFTVWPAAVPVGGGMRLDP
GESWALDVPANSGAGRVWARTGCSFDANGNGSCQTGDCGGVLKCKNSGKPPQTLAEFTVD
QTSVQDFFDISLTDGFNVPMDFLPVPAPEQRHGAPPCSKGPRCPANITSQCPSELKAPGG
CNSACNVFKQDKYCCTGTTGTKTCEPTTFSLPFVRMCPDAYSYSLDDSSSTTFTCPSGTN
YQIIFCPPTDLTSSSPVPPPAPIAIGPSGLDSSSKRGGRLVATIVVSVIGSTSVLTIIIA
SIIIIKRRIRRHQEMQEEEQEFEELPLQGMPRRFTFQQLQEATDQFRDKLGQGGFGSVFL
GQIGGERVAVKRLDQSGQGMREFMAEVQTIGSIHHINLVRLIGFCAEKSQRLLVYEHMPK
GSLDRWLYHQQGSPAPALDWWTRYKIITQVAKGLSYLHEECMMRIAHLDVKPQNILLDDN
FNAKLSDFGLCKLIDRDKSQVITRMRGTPGYLAPEWLTSQITEKADVYSFGIVVMEMISG
RKNLDTSRSEQSIHLITLLQEKVKGDQLADLIDKHSNDMQVHRQEIIEMMKLAMWCLQID
CKRRPQMSEVVKVLEGTTSIETDIDHDFVATNPVSFGVAGIVDSDPPVASNLSGPR

Transcript Sequence

Transcript ID

Os01t0113650-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:738908:740898:1 gene:Os01g0113650 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0113650-00)
Sequence

GCAATCGAATCACAACACAAATGGCAGCGGGGAGTACCATCAGTACTAGTCGCCGCACTC
ACCACCTTGTGACTCTGCTGCTCCTCGTTGCCGCCAGCACCAACTACGCCGCCGGAGCCA
CGCTGAACATCACCAACCGATGCTCCTTCACCGTGTGGCCGGCCGCCGTGCCGGTGGGTG
GCGGCATGCGGCTCGACCCAGGCGAGTCGTGGGCGCTCGACGTGCCCGCCAACAGCGGCG
CAGGGCGTGTGTGGGCGCGCACAGGCTGCTCATTCGATGCCAATGGCAACGGATCGTGCC
AGACGGGAGACTGCGGCGGCGTGCTCAAGTGCAAGAACAGCGGCAAGCCACCTCAGACGC
TCGCTGAGTTCACGGTGGACCAGACCAGCGTACAGGATTTCTTCGACATCTCCCTCACCG
ACGGCTTCAACGTGCCCATGGACTTCCTCCCCGTGCCGGCTCCGGAGCAGAGGCACGGAG
CACCACCGTGCAGCAAGGGGCCACGCTGCCCGGCCAACATCACGTCGCAGTGCCCCAGCG
AGCTCAAGGCGCCTGGAGGCTGCAACAGCGCCTGCAATGTGTTCAAGCAAGACAAATACT
GCTGCACTGGCACCACTGGCACCAAAACCTGCGAACCCACCACCTTCTCACTGCCATTCG
TCAGGATGTGCCCTGACGCATATAGCTACAGTTTGGATGACAGCTCCAGCACTACATTCA
CTTGCCCGTCAGGGACAAACTACCAGATCATCTTCTGCCCTCCAACTGATCTCACGTCTT
CATCTCCGGTTCCTCCTCCTGCACCTATTGCTATTGGGCCTTCAGGCTTGGATTCCTCAT
CCAAAAGAGGAGGAAGGCTTGTTGCCACTATCGTGGTCTCTGTGATCGGCTCTACTTCAG
TACTCACCATTATCATCGCTTCCATCATTATCATCAAACGAAGAATACGAAGACACCAGG
AGATGCAAGAAGAGGAACAAGAGTTTGAGGAGCTACCCCTTCAAGGAATGCCGAGGAGGT
TCACATTTCAGCAGCTACAAGAAGCAACTGATCAATTCAGAGACAAGCTCGGTCAAGGGG
GGTTTGGGTCTGTTTTCCTGGGACAGATTGGAGGTGAAAGAGTAGCGGTGAAACGCTTGG
ATCAAAGTGGTCAGGGAATGAGAGAATTTATGGCAGAGGTTCAGACAATCGGCAGCATTC
ACCATATCAATCTAGTGAGGCTGATTGGCTTCTGTGCAGAGAAATCACAAAGGCTTTTGG
TTTATGAGCATATGCCCAAAGGATCCTTGGACAGGTGGCTCTATCACCAGCAAGGTTCTC
CTGCTCCTGCTCTAGATTGGTGGACACGATACAAGATTATTACTCAAGTAGCCAAGGGTC
TCTCTTATCTTCATGAGGAGTGCATGATGAGAATTGCTCACTTAGATGTAAAACCACAAA
ATATCCTCCTAGACGACAACTTCAATGCTAAACTTTCTGATTTTGGTCTATGCAAGCTTA
TTGATCGAGATAAGAGTCAAGTGATTACCAGAATGAGAGGCACACCTGGATATTTAGCTC
CAGAATGGCTGACATCGCAGATCACAGAAAAGGCAGATGTCTATAGCTTTGGCATAGTAG
TCATGGAAATGATCAGTGGGAGAAAGAACCTTGACACTTCCAGGTCTGAACAGAGTATCC
ATCTAATTACCTTACTGCAAGAAAAGGTGAAGGGTGATCAGTTGGCAGATTTGATTGACA
AGCACAGCAATGATATGCAAGTACACCGGCAAGAAATAATTGAGATGATGAAACTCGCAA
TGTGGTGTTTGCAGATTGATTGCAAAAGAAGGCCTCAAATGTCTGAGGTTGTCAAAGTTT
TGGAAGGCACCACAAGTATTGAGACTGACATAGACCATGACTTCGTCGCAACAAATCCAG
TAAGCTTTGGTGTTGCTGGAATTGTGGACTCCGACCCCCCTGTAGCATCTAATTTATCAG
GCCCCAGGTGA