Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0111700-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:620572:621516:-1 gene:Os01g0111700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0111700-01)
Sequence

ATGGCGAGGGCAATCCTCCTCCATCTCCACTCCGACGAAACCGTGCCTCTCCTCGTCGTC
ATCGTCGCCGCGGTGGCCGCCGTCGCGCTGGTCATCGTGTCGCTCTGCACGAGCAGCAAG
CACGGCAAGCTGTGGAAGCAGCAGCAGCAGAGAAGTGGGTCGTCGTTGCCGCAGCTGAAG
GCGGAGGAATCAGCAGGCGGCGGCGGCGGCGCCAGCCGGAAGCAGCTGCTGGCCACCCTC
AGCGGCATCGGCGGAAAGGCGGCGGCCATGGCGAAGATGGTGTCGTGGAACAGGCGGTCG
TCGCGGCAGGGATGCAGCAGCGACGACGACGACGAGGCCGGCGGCGGCGGCTTGGCGGTG
GAGGAGGAGGAGGCATTGTGGAGGAAGACCATCATGATGGGAGACAAGTGCCGGCCGCTG
CAGTTCTCCGGCCACATCGCCTATGACTCCGACGGCAACCAGCTGCCGGCGACGACCATC
AGCAAGGAAGCAGCCAATGCGGATGCGGTCAACAATATTTATGTTTAA

Peptide Sequence

PEP ID

Os01t0111700-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:620572:621516:-1 gene:Os01g0111700 transcript:Os01t0111700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0111700-01)
Sequence

MARAILLHLHSDETVPLLVVIVAAVAAVALVIVSLCTSSKHGKLWKQQQQRSGSSLPQLK
AEESAGGGGGASRKQLLATLSGIGGKAAAMAKMVSWNRRSSRQGCSSDDDDEAGGGGLAV
EEEEALWRKTIMMGDKCRPLQFSGHIAYDSDGNQLPATTISKEAANADAVNNIYV

Transcript Sequence

Transcript ID

Os01t0111700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:620572:621516:-1 gene:Os01g0111700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0111700-01)
Sequence

AATGGCAAGCTCATATACTGTCTGACCAGCATTAATTCCGGCCAGCCGCGAGCCATGGCG
AGGGCAATCCTCCTCCATCTCCACTCCGACGAAACCGTGCCTCTCCTCGTCGTCATCGTC
GCCGCGGTGGCCGCCGTCGCGCTGGTCATCGTGTCGCTCTGCACGAGCAGCAAGCACGGC
AAGCTGTGGAAGCAGCAGCAGCAGAGAAGTGGGTCGTCGTTGCCGCAGCTGAAGGCGGAG
GAATCAGCAGGCGGCGGCGGCGGCGCCAGCCGGAAGCAGCTGCTGGCCACCCTCAGCGGC
ATCGGCGGAAAGGCGGCGGCCATGGCGAAGATGGTGTCGTGGAACAGGCGGTCGTCGCGG
CAGGGATGCAGCAGCGACGACGACGACGAGGCCGGCGGCGGCGGCTTGGCGGTGGAGGAG
GAGGAGGCATTGTGGAGGAAGACCATCATGATGGGAGACAAGTGCCGGCCGCTGCAGTTC
TCCGGCCACATCGCCTATGACTCCGACGGCAACCAGCTGCCGGCGACGACCATCAGCAAG
GAAGCAGCCAATGCGGATGCGGTCAACAATATTTATGTTTAACAATCATATGCATCGAGA
GGAAAAATAAATAATAGTAATTGTGTACATGAGATGCAGTGATGTACAGAATGACAACCT
GCTGCGAAAACGTCGAAAAGGTCCATATTCTAGTGGTTACAACTTACAAGTGTCATAGTA
GCACCTTAAGTCTTAGGTTGGACTCAAATTTTTCAGGATTTAACGACTTTATGCTTCAGT
GGTAGACGATGTACCCATCAATAGCGAGATGCCTATAATGACTTTGTCAATTTACAGTAT
TTACTGGTCCAGCCAGTGTCTTTATAGGAGTGAGTGTGTGTGCATTGTGAGTGTCTATTG
TACTGTGTAATTTAAAAAAAATGACAACGTGCTAGCTACGGAGGG