Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0111500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:603643:605643:-1 gene:Os01g0111500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 125 description:ROOT HAIR DEFECTIVE-SIX LIKE (RSL) class I basic helix-loop-helix protein, bHLH transcription factor, Regulation of root hair development (Os01t0111500-01)
Sequence	ATGATGGCAGCTCAGGCAAGCAGCAAGCGCGGCATGCTGCTGCCACGGGAGGCGGTGCTC TACGACGACGAGCCCTCCATGCCGCTGGAGATCTTGGGCTACCACGGCAATGGCGTCGGC GGCGGTGGCTGCGTTGACGCCGATTACTACTACAGCTGGTCGGGGTCCAGCTCCAGCTCC AGCTCGTCGGTGCTCAGCTTTGACCAGGCGGCGGTCGGCGGCAGCGGCGGCGGCTGCGCC CGGCAGCTGGCTTTCCATCCCGGCGGCGACGACGACGACTGCGCCATGTGGATGGACGCC GCCGCCGGCGCCATGGTCGAGAACACGTCTGTCGTCGCCGGCGGCGGCAACAACTACTGT CATCGCCTGCAGTTCCACGGCGGCGCCGCCGGTTTCGGACTCGCGAGCCCAGGCTCGTCG GTCGTTGACAACGGCCTCGAAATCCACGAGAGCAACGTCAGCAAGCCGCCACCGCCGGCA GCCAAGAAGCGCGCATGCCCGAGCGGCGAGGCGAGAGCAGCGGGGAAGAAGCAGTGCAGG AAAGGGAGCAAGCCAAACAAGGCTGCTTCTGCTTCTTCTCCTTCTCCTTCTCCTTCTCCT TCTCCTTCTCCTAACAAGGAACAACCTCAAAGCGCCGCTGCAAAGGTAAGAAGAGAGCGG ATCAGTGAGAGGCTCAAAGTTCTTCAGGATCTCGTGCCTAATGGCACAAAGGTAGACTTG GTCACCATGCTAGAAAAGGCGATCAACTACGTCAAATTCCTCCAGCTGCAAGTGAAGGTT TTGGCTACTGATGAGTTCTGGCCGGCACAAGGAGGGAAAGCACCAGAGCTCTCTCAAGTC AAGGACGCCTTGGACGCCATCCTATCTTCTCAGCATCCAAACAAATGA

Peptide Sequence

PEP ID	Os01t0111500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:603643:605643:-1 gene:Os01g0111500 transcript:Os01t0111500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 125 description:ROOT HAIR DEFECTIVE-SIX LIKE (RSL) class I basic helix-loop-helix protein, bHLH transcription factor, Regulation of root hair development (Os01t0111500-01)
Sequence	MMAAQASSKRGMLLPREAVLYDDEPSMPLEILGYHGNGVGGGGCVDADYYYSWSGSSSSS SSSVLSFDQAAVGGSGGGCARQLAFHPGGDDDDCAMWMDAAAGAMVENTSVVAGGGNNYC HRLQFHGGAAGFGLASPGSSVVDNGLEIHESNVSKPPPPAAKKRACPSGEARAAGKKQCR KGSKPNKAASASSPSPSPSPSPSPNKEQPQSAAAKVRRERISERLKVLQDLVPNGTKVDL VTMLEKAINYVKFLQLQVKVLATDEFWPAQGGKAPELSQVKDALDAILSSQHPNK

Transcript Sequence

Transcript ID	Os01t0111500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:603643:605643:-1 gene:Os01g0111500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 125 description:ROOT HAIR DEFECTIVE-SIX LIKE (RSL) class I basic helix-loop-helix protein, bHLH transcription factor, Regulation of root hair development (Os01t0111500-01)
Sequence	ATGCATACTGAGATCGATCGATCCATCAGGTTGCTACTACCAAGAACAGAAACCCTAGCT AGCTAGTTAAACATCATCGATCACCATTAGACTAATTTAGAGCTCTTGCTCGATCTTACG ATACGCAACGTAGTGATCACACTGCTGTGCTGCATCGTATAGTAGCTAGCTAGCTAAACA CAGAGCTTAATTAGCTGATTAATTAAGGTAGATGATGGCAGCTCAGGCAAGCAGCAAGCG CGGCATGCTGCTGCCACGGGAGGCGGTGCTCTACGACGACGAGCCCTCCATGCCGCTGGA GATCTTGGGCTACCACGGCAATGGCGTCGGCGGCGGTGGCTGCGTTGACGCCGATTACTA CTACAGCTGGTCGGGGTCCAGCTCCAGCTCCAGCTCGTCGGTGCTCAGCTTTGACCAGGC GGCGGTCGGCGGCAGCGGCGGCGGCTGCGCCCGGCAGCTGGCTTTCCATCCCGGCGGCGA CGACGACGACTGCGCCATGTGGATGGACGCCGCCGCCGGCGCCATGGTCGAGAACACGTC TGTCGTCGCCGGCGGCGGCAACAACTACTGTCATCGCCTGCAGTTCCACGGCGGCGCCGC CGGTTTCGGACTCGCGAGCCCAGGCTCGTCGGTCGTTGACAACGGCCTCGAAATCCACGA GAGCAACGTCAGCAAGCCGCCACCGCCGGCAGCCAAGAAGCGCGCATGCCCGAGCGGCGA GGCGAGAGCAGCGGGGAAGAAGCAGTGCAGGAAAGGGAGCAAGCCAAACAAGGCTGCTTC TGCTTCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTAACAAGGAACAACCTCA AAGCGCCGCTGCAAAGGTAAGAAGAGAGCGGATCAGTGAGAGGCTCAAAGTTCTTCAGGA TCTCGTGCCTAATGGCACAAAGGTAGACTTGGTCACCATGCTAGAAAAGGCGATCAACTA CGTCAAATTCCTCCAGCTGCAAGTGAAGGTTTTGGCTACTGATGAGTTCTGGCCGGCACA AGGAGGGAAAGCACCAGAGCTCTCTCAAGTCAAGGACGCCTTGGACGCCATCCTATCTTC TCAGCATCCAAACAAATGATGTTGTGCTGCTGACACAAAATGCATCAAATTTCACAAAGC TAATATTAAGTTTGATGCATGTAAGATCTTTAGAACAGAGGCAATGTAACAGGGCTTCTG CTCTGAAAAGATGAGAGAATTGTTCTATTGGACTTTCAGAGTTGGAAATCAGTCGTGCAT CTTAGATGTTTTTTTTCACTCTTTTTTCCTAGATCAATTCTTTCTTGTTTTGTTGCCAAA GCCTGAGTAATGTACTTCAGTCATCAGAGTTCTTTCACTTTATAGCAAGGATGTAGTGTA GGTATCAGTTAGAAAACAAGAATCTGAGCACTGCAAATTCGCTTGCTACTGTAAATTACA CTGCAAATTCCAATAAATGAATCCTAAATAGATGC