Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0110700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:562088:572092:-1 gene:Os01g0110700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphoenolpyruvate carboxylase b, PEPCase b description:Similar to Phosphoenolpyruvate carboxylase (EC 4.1.1.31). (Os01t0110700-01);Similar to Phosphoenolpyruvate carboxylase. (Os01t0110700-02)
Sequence	ATGACGGACACGACGGATGACATCGCGGAGGGGATATCATTCCAGGCGTTCGAGGACGAC TGCCGGCTGCTGGGCAGCCTCCTCCACGACGTCCTCCTCCGCGAGCTCGGCCCCCGCTTC ATCCACCTCCTCGAGCGCATCACCATCCTCGCCCAGAGCGCCGTCAACATGCGCTCCGCC GGGGTGGAGGACACCGCCGTCGTCGTCGAGAAGCAGCTCGGCGCCGAGCTGGCCGCCATG TCGCTCGAGGACTCGCTCTGCCTCGCCCGCGCCTTCTCCCACCACCTCAACCTCATGACC ATCGCCGACACTTACCACAGGGTTCGTAAAGCACGCAATTTCGCCGACCTGTCGAAATCA TGTGATGATACATTTGCCAAATTGATTCAAAGTGGTGTTAGCCCGGAAGAACTCTATGAC ACTGTATGCAAGCAGGAGGTTGAAATTGTTCTGACAGCTCATCCAACTCAAATCAATCGG CGGACTTTGCAGTACAAACACCTTAGAATAGCTCACCTTTTGGAATTCAACGAACGTGCT GATCTTAGCCTCGAGGATAAAGAAATTCTAATTGAAGATCTGGTAAGAGAAATCACGGCA ATATGGCAGACTGATGAGTTGAGGCGCCATAAACCTACACCTGTTGACGAAGCTAGAGCT GGCCTTCATATTGTTGAGCAATCGCTCTGGAAAGCAATACCACACTATCTTCGCCGTGTT AGCAATGCTCTAAAGAAGAACACTGGCAAGCCACTTCCGCTCACCTGCACACCAATCAAA TTCGGTTCATGGATGGGTGGTGACCGTGATGGGAATCCTAATGTCACAGCAAAAGTTACT AGGGATGTTTCCATTTTGTCCCAATGGATGGCAATTGATCTGTACATCCGGGAACTAGAC ACTCTAAGCTTTGAGCTATCAATTAACAGATGCAGCGAGAAGCTTGCAAACTTAGCAAAT GACATCCTGCTCAAAGAATCAGCATCAGAGGACCAGAAGACCAATACCTGGAATCAAACT GGACCCCAGAACAATCTAAAGCTTCAGCACAGCTTGGCCCTTCCTGCACAGCTTCCTTCT GGTGCTGATCTTCCATCATGTACAGAATGCAACGATGGGGAATCTCAAATCAGAATGTCA AAACTTCCAGGGAATCCAAAGCATAAGTTGGCTCTAAACATAACAGAAAAACGTGAAGAC AGTCCATTGCCGTCTCCTAGTCATCGCCCGATGGGTCGAACTCCAAGTGGAGGTCAACTA AGGAAGATGTTCACAGAATCCCAAATTGGTCGATCGAGCTTCCGGAAACTTCTAGAACCA AGCATATCAGAGAGACCAGGGAGTACTCCTTATAGAGTTGTCCTTGGTGATGTGAAAGAA AAGCTGATGAACACACGGAGACGACTCGAGCTTCTTCTTGAGGATCTACCATGTGATCGT GATACTTCAGAATATTATGATACATCGGATAAACTTTTGGAGCCCTTGCTTTTGTGTTAT CAATCACTGCAATCATGTGGATCTAGTGTGCTTGCGGATGGCCGGTTAGCAGATTTGATT CGACGGGTTGCAACCTTTGGTATGGTGTTAATGAAGCTTGATGTACGGCAGGAATCAGGC CGGCATACGGAAACACTTGATGCCATCACATCTTACCTGGATCTTGGTGTTTATAGTGAG TGGGATGAACAAAAGAAACTGGATTTCTTGACTAGAGAGCTGAAAGGGAAGCGCCCTCTT GTCCCCCCATACATACAGGTTACTGCTGATGTGCAAGAAGTTCTTGATACATTCCGTGTT GCTGCAGAGTTAGGAAGCGATGCACTTGGAGCATATGTGATTTCAATGGCCTCAAATGCA AGCGATGTCCTAGCGGTTGAACTGTTGCAGAAGGACGCAAGACTTACAGTCAGCGGGGAC CTAGGAAGGCCATGTCCTGGTGGAACGTTGAGAGTTGTTCCACTGTTTGAGACGGTGAAT GATCTGCGAGAAGCCGGCCCAGCGATCAGAAAGTTACTGTCCATCGACTGGTACAGAGAC CACATCATCAAGAACCATAACGGGCACCAAGAGGTGATGGTGGGCTACTCTGATTCCGGC AAGGACGCCGGCCGTTTCACCGCGGCATGGGAGCTATACAAGGCTCAGGAAGATGTGGTG GCCGCGTGCAACGCGTTCGGCATCAAGGTTACGCTCTTCCATGGCCGCGGCGGGAGCATC GGCCGCGGCGGCGGGCCGACCTATCTCGCCATTCAGTCGCAGCCACCCGGCTCAGTGATG GGAACTCTTCGGTCGACGGAGCAAGGGGAGATGGTGCAGGCCAAGTTCGGGCTGCCGCAG ACGTCTGTCCGGCAGCTGGAGATATACACGACGGCGGTGCTGCTGGCGACGCTGCGGCCG CCGCAGCCGCCGCGGGACGACAAGTGGCGGGGGGTGATGGAGGAGATATCGCGGGTGAGC TGCGCGCAGTACCGGAGCACGGTGTACGAGAACCCGGAGTTCATCAAGTACTTCCAGGAG GCGACGCCGCAGGCGGAGCTGGGCTACCTCAACATCGGCAGCCGCCCCGCGAAGCGCAGG ACCACGCCGGGGATCTCCAACCTTCGCGCCATCCCCTGGGTGTTCGCGTGGACGCAGACG CGGCTGGTGCTCCCGGCGTGGCTCGGCGTGGGGCGCGGCCTCCAGGACGCCTGCGACAAG GGCCACACCCACGAGCTCCGCGCCATGTACGAGGAGTGGCCCTTCTTCCAGTCCACGGTG GACCTCATCGAGATGGTGGTGGCCAAGGCGGACGCGCCCATGGCCAAGCACTACGACGAC GTGCTGGTGCACGACGCGGGGCGGCGGACGCTCGGGGCGGAGCTCCGGCAGGAGCTGGCG CGGACGGAGAACTGCGTGCTGGCGGTGAGCGGTCACAAGAAGCTGTCCGCCAACAACCGC AGCCTGCGGAAGCTGATCGACAGCAGGCTCACGTACCTCAACCCCATGAACATGCTCCAG GTCGAGGTCCTCCGTCGCCTCCGCCAGGACGACGACAACCGCAAGCTCCGCGACGCGCTG CTCATCACCATCAACGGCATTGCCGCCGGCATGCGCAACACCGGCTGA

Peptide Sequence

PEP ID	Os01t0110700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:562088:572092:-1 gene:Os01g0110700 transcript:Os01t0110700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphoenolpyruvate carboxylase b, PEPCase b description:Similar to Phosphoenolpyruvate carboxylase (EC 4.1.1.31). (Os01t0110700-01);Similar to Phosphoenolpyruvate carboxylase. (Os01t0110700-02)
Sequence	MTDTTDDIAEGISFQAFEDDCRLLGSLLHDVLLRELGPRFIHLLERITILAQSAVNMRSA GVEDTAVVVEKQLGAELAAMSLEDSLCLARAFSHHLNLMTIADTYHRVRKARNFADLSKS CDDTFAKLIQSGVSPEELYDTVCKQEVEIVLTAHPTQINRRTLQYKHLRIAHLLEFNERA DLSLEDKEILIEDLVREITAIWQTDELRRHKPTPVDEARAGLHIVEQSLWKAIPHYLRRV SNALKKNTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAKVTRDVSILSQWMAIDLYIRELD TLSFELSINRCSEKLANLANDILLKESASEDQKTNTWNQTGPQNNLKLQHSLALPAQLPS GADLPSCTECNDGESQIRMSKLPGNPKHKLALNITEKREDSPLPSPSHRPMGRTPSGGQL RKMFTESQIGRSSFRKLLEPSISERPGSTPYRVVLGDVKEKLMNTRRRLELLLEDLPCDR DTSEYYDTSDKLLEPLLLCYQSLQSCGSSVLADGRLADLIRRVATFGMVLMKLDVRQESG RHTETLDAITSYLDLGVYSEWDEQKKLDFLTRELKGKRPLVPPYIQVTADVQEVLDTFRV AAELGSDALGAYVISMASNASDVLAVELLQKDARLTVSGDLGRPCPGGTLRVVPLFETVN DLREAGPAIRKLLSIDWYRDHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVV AACNAFGIKVTLFHGRGGSIGRGGGPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQ TSVRQLEIYTTAVLLATLRPPQPPRDDKWRGVMEEISRVSCAQYRSTVYENPEFIKYFQE ATPQAELGYLNIGSRPAKRRTTPGISNLRAIPWVFAWTQTRLVLPAWLGVGRGLQDACDK GHTHELRAMYEEWPFFQSTVDLIEMVVAKADAPMAKHYDDVLVHDAGRRTLGAELRQELA RTENCVLAVSGHKKLSANNRSLRKLIDSRLTYLNPMNMLQVEVLRRLRQDDDNRKLRDAL LITINGIAAGMRNTG

Transcript Sequence

Transcript ID	Os01t0110700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:562088:572092:-1 gene:Os01g0110700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphoenolpyruvate carboxylase b, PEPCase b description:Similar to Phosphoenolpyruvate carboxylase (EC 4.1.1.31). (Os01t0110700-01);Similar to Phosphoenolpyruvate carboxylase. (Os01t0110700-02)
Sequence	AATCCCAATCAATCCCTCTCTCCATCTGGTGCTCTCTATCTGAGGAATCCGAATCCGATC AGGGGAGGCGAGGCGCGGCGGTGATCGGCGATGACGGACACGACGGATGACATCGCGGAG GGGATATCATTCCAGGCGTTCGAGGACGACTGCCGGCTGCTGGGCAGCCTCCTCCACGAC GTCCTCCTCCGCGAGCTCGGCCCCCGCTTCATCCACCTCCTCGAGCGCATCACCATCCTC GCCCAGAGCGCCGTCAACATGCGCTCCGCCGGGGTGGAGGACACCGCCGTCGTCGTCGAG AAGCAGCTCGGCGCCGAGCTGGCCGCCATGTCGCTCGAGGACTCGCTCTGCCTCGCCCGC GCCTTCTCCCACCACCTCAACCTCATGACCATCGCCGACACTTACCACAGGGTTCGTAAA GCACGCAATTTCGCCGACCTGTCGAAATCATGTGATGATACATTTGCCAAATTGATTCAA AGTGGTGTTAGCCCGGAAGAACTCTATGACACTGTATGCAAGCAGGAGGTTGAAATTGTT CTGACAGCTCATCCAACTCAAATCAATCGGCGGACTTTGCAGTACAAACACCTTAGAATA GCTCACCTTTTGGAATTCAACGAACGTGCTGATCTTAGCCTCGAGGATAAAGAAATTCTA ATTGAAGATCTGGTAAGAGAAATCACGGCAATATGGCAGACTGATGAGTTGAGGCGCCAT AAACCTACACCTGTTGACGAAGCTAGAGCTGGCCTTCATATTGTTGAGCAATCGCTCTGG AAAGCAATACCACACTATCTTCGCCGTGTTAGCAATGCTCTAAAGAAGAACACTGGCAAG CCACTTCCGCTCACCTGCACACCAATCAAATTCGGTTCATGGATGGGTGGTGACCGTGAT GGGAATCCTAATGTCACAGCAAAAGTTACTAGGGATGTTTCCATTTTGTCCCAATGGATG GCAATTGATCTGTACATCCGGGAACTAGACACTCTAAGCTTTGAGCTATCAATTAACAGA TGCAGCGAGAAGCTTGCAAACTTAGCAAATGACATCCTGCTCAAAGAATCAGCATCAGAG GACCAGAAGACCAATACCTGGAATCAAACTGGACCCCAGAACAATCTAAAGCTTCAGCAC AGCTTGGCCCTTCCTGCACAGCTTCCTTCTGGTGCTGATCTTCCATCATGTACAGAATGC AACGATGGGGAATCTCAAATCAGAATGTCAAAACTTCCAGGGAATCCAAAGCATAAGTTG GCTCTAAACATAACAGAAAAACGTGAAGACAGTCCATTGCCGTCTCCTAGTCATCGCCCG ATGGGTCGAACTCCAAGTGGAGGTCAACTAAGGAAGATGTTCACAGAATCCCAAATTGGT CGATCGAGCTTCCGGAAACTTCTAGAACCAAGCATATCAGAGAGACCAGGGAGTACTCCT TATAGAGTTGTCCTTGGTGATGTGAAAGAAAAGCTGATGAACACACGGAGACGACTCGAG CTTCTTCTTGAGGATCTACCATGTGATCGTGATACTTCAGAATATTATGATACATCGGAT AAACTTTTGGAGCCCTTGCTTTTGTGTTATCAATCACTGCAATCATGTGGATCTAGTGTG CTTGCGGATGGCCGGTTAGCAGATTTGATTCGACGGGTTGCAACCTTTGGTATGGTGTTA ATGAAGCTTGATGTACGGCAGGAATCAGGCCGGCATACGGAAACACTTGATGCCATCACA TCTTACCTGGATCTTGGTGTTTATAGTGAGTGGGATGAACAAAAGAAACTGGATTTCTTG ACTAGAGAGCTGAAAGGGAAGCGCCCTCTTGTCCCCCCATACATACAGGTTACTGCTGAT GTGCAAGAAGTTCTTGATACATTCCGTGTTGCTGCAGAGTTAGGAAGCGATGCACTTGGA GCATATGTGATTTCAATGGCCTCAAATGCAAGCGATGTCCTAGCGGTTGAACTGTTGCAG AAGGACGCAAGACTTACAGTCAGCGGGGACCTAGGAAGGCCATGTCCTGGTGGAACGTTG AGAGTTGTTCCACTGTTTGAGACGGTGAATGATCTGCGAGAAGCCGGCCCAGCGATCAGA AAGTTACTGTCCATCGACTGGTACAGAGACCACATCATCAAGAACCATAACGGGCACCAA GAGGTGATGGTGGGCTACTCTGATTCCGGCAAGGACGCCGGCCGTTTCACCGCGGCATGG GAGCTATACAAGGCTCAGGAAGATGTGGTGGCCGCGTGCAACGCGTTCGGCATCAAGGTT ACGCTCTTCCATGGCCGCGGCGGGAGCATCGGCCGCGGCGGCGGGCCGACCTATCTCGCC ATTCAGTCGCAGCCACCCGGCTCAGTGATGGGAACTCTTCGGTCGACGGAGCAAGGGGAG ATGGTGCAGGCCAAGTTCGGGCTGCCGCAGACGTCTGTCCGGCAGCTGGAGATATACACG ACGGCGGTGCTGCTGGCGACGCTGCGGCCGCCGCAGCCGCCGCGGGACGACAAGTGGCGG GGGGTGATGGAGGAGATATCGCGGGTGAGCTGCGCGCAGTACCGGAGCACGGTGTACGAG AACCCGGAGTTCATCAAGTACTTCCAGGAGGCGACGCCGCAGGCGGAGCTGGGCTACCTC AACATCGGCAGCCGCCCCGCGAAGCGCAGGACCACGCCGGGGATCTCCAACCTTCGCGCC ATCCCCTGGGTGTTCGCGTGGACGCAGACGCGGCTGGTGCTCCCGGCGTGGCTCGGCGTG GGGCGCGGCCTCCAGGACGCCTGCGACAAGGGCCACACCCACGAGCTCCGCGCCATGTAC GAGGAGTGGCCCTTCTTCCAGTCCACGGTGGACCTCATCGAGATGGTGGTGGCCAAGGCG GACGCGCCCATGGCCAAGCACTACGACGACGTGCTGGTGCACGACGCGGGGCGGCGGACG CTCGGGGCGGAGCTCCGGCAGGAGCTGGCGCGGACGGAGAACTGCGTGCTGGCGGTGAGC GGTCACAAGAAGCTGTCCGCCAACAACCGCAGCCTGCGGAAGCTGATCGACAGCAGGCTC ACGTACCTCAACCCCATGAACATGCTCCAGGTCGAGGTCCTCCGTCGCCTCCGCCAGGAC GACGACAACCGCAAGCTCCGCGACGCGCTGCTCATCACCATCAACGGCATTGCCGCCGGC ATGCGCAACACCGGCTGACTCCTCTTCCCTCCTCTCCTCTGCAAATTAACTTATATTTCT TGCAACTATATTTCCGTCTGAACTAATTACCGGAGTTTTTTTTCTCGTTCAATTTTCCCT CAAAATAAGAAAGAAACCTTGCATGTAGCATTTTCACATTGGATTGGATATGTACATTGC ATGGAGAATGAAATAGCATTATAGACTATAGTGGTGTGGATTGATGTATGTAGT