Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0110500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:554025:558015:-1 gene:Os01g0110500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os01t0110500-01)
Sequence	ATGGCGTCCTCACCGTCTCCCTCCCCGGGCACCGCAACTCCCGCCACCGCCGCCGCCGCG CCTTCCACCGCGACCCCAACACCCGCGACGCAGCCCAATGCCACGCCGGCCGACCCCTCC ATCACTCCCCCGGCCGCGTCCCCTCCCCTTCCCTCCGCCGCCACGCCACCCCCACAGCCC GATTCCCCGCCGCCCTCTCCGCCACCAGCTCCTCCGGTCGCAGTGCCACCGCCGGCCACC GTGCCACCGCCGCCTGTACCCGTTGCGTCTCCACCACCAACCCCGTCAGCCACATTGCCG CCGCCGTCGCCACCGGCTTCAGTGCCGGTGCCACCTACACCTGCTACTACCCCTCCAAAG CCGTCGCCTGTGCAGCAACCCCCAGTGGCTGCATCACCACCTCCATCGTCTCCGGCTGAT TTGCCGCCGCCTAATCCGCCGGCTCGCTCAGACACGCCGCCGGTAGTGCAGTCACCTCCA CCGCCGCACCGGAGATCGCCGAGAACGCCATGGGCTCCACCGATGGCGCCGTCGCCTTCT GGAAGTCCTACCAAGCCTTCTCCAGCTAGTCCATCACCAATTGCTGGAGATCCAATCATC CCTACACCCAATAACCCTTCGTCGCCTCTGGCGACGCCATCAGCACCAGGCTCTGGTACT CCTGTGGTGACGCCATCTGCACCAGTCTCTGGCCCTCCATCGCCAGGCACGGCTCCAGCC ACGGCAGCTGATCGATCCAACAAGTCATTAAGTCCCAACACGCAGGACGGCAGCGTCTCG TCGAGCGATGGTGGAATGAGCTCAAGTGCAAAGGCGGGCATCGGTGTAGTCGTCGCTATT CTTGTGCTTAGCTTGGTAGGAGCTGCATTTTGGTACAAGAAGAAACGGAGGAGAGCAACC GGTTACCATGCAGGATTTGTGATGCCATCGCCTGCCTCGTCTCCACAAGTGTTAGGGTAT TCAGGTAAAACTAACTACAGTGCTGGCAGTCCTGATTACAAAGAAACAATGTCAGAGTTC AGCATGGGCAATTGTCGATTCTTCACTTACGAGGAATTGCACCAGATCACAAATGGTTTT GCAGCGAAGAACCTGCTAGGGGAAGGTGGGTTTGGGTCTGTTTACAAGGGTTGCTTGGCT GATGGAAGAGAGGTTGCCGTTAAGAAACTGAAAGGTGGTGGTGGGCAGGGGGAACGTGAG TTCCAGGCTGAGGTGGAGATAATCAGTCGTGTGCACCACCGCCATCTAGTTTCTCTTGTT GGGTATTGCATTTCGGGGGACCAGAGGTTGCTTGTCTATGATTTTGTGCCCAATGACACA CTGCACCATCATCTTCATGGACGTGGAATGCCGGTTTTGGAGTGGTCAGCTAGGGTTAAA ATTGCAGCTGGCTCAGCTCGAGGGATAGCATATCTTCATGAAGATTGCCATCCCCGAATT ATCCACCGAGATATTAAATCCTCCAACATTTTACTGGATAATAACTTTGAAGCCCAGGTT GCTGATTTTGGCCTTGCAAGACTAGCTATGGATGCAGTCACGCATGTAACTACACGGGTG ATGGGAACTTTTGGTTATCTGGCTCCGGAGTATGCTTCGAGTGGCAAGTTGACTGAGAGA TCTGATGTATTCTCTTTTGGCGTTGTTCTCTTAGAGCTTATTACCGGTAGAAAGCCTGTT GACGCATCAAAACCATTGGGTGATGAGAGCCTTGTTGAGTGGGCTAGGCCATTGCTCACA GAAGCAATTGAGACTGGCAACGTTGGGGAGCTGATTGACTCCAGGCTGGACAAGAACTTC AATGAAGCTGAAATGTTTCGAATGATCGAAGCTGCGGCAGCTTGCATTCGACATTCAGCA TCTAGGAGACCCCGGATGAGCCAGGTGGTGCGTGTTCTTGATAGCTTAGCTGACGTCGAT CTAAGCAATGGTATTCAGCCTGGTAAGAGCGAAATGTTCAATGTGGCAAACACGGCAGAA ATCAGGCTGTTTCAGCGGATGGCTTTTGGTAGCCAAGATTTCACAACTGATTTCACCCAA TCTAGCTGGGATAGTCGTAGTAGAGATGTTGATGCCTCTGGTTCGAGGCCCTTGTAA

Peptide Sequence

PEP ID	Os01t0110500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:554025:558015:-1 gene:Os01g0110500 transcript:Os01t0110500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os01t0110500-01)
Sequence	MASSPSPSPGTATPATAAAAPSTATPTPATQPNATPADPSITPPAASPPLPSAATPPPQP DSPPPSPPPAPPVAVPPPATVPPPPVPVASPPPTPSATLPPPSPPASVPVPPTPATTPPK PSPVQQPPVAASPPPSSPADLPPPNPPARSDTPPVVQSPPPPHRRSPRTPWAPPMAPSPS GSPTKPSPASPSPIAGDPIIPTPNNPSSPLATPSAPGSGTPVVTPSAPVSGPPSPGTAPA TAADRSNKSLSPNTQDGSVSSSDGGMSSSAKAGIGVVVAILVLSLVGAAFWYKKKRRRAT GYHAGFVMPSPASSPQVLGYSGKTNYSAGSPDYKETMSEFSMGNCRFFTYEELHQITNGF AAKNLLGEGGFGSVYKGCLADGREVAVKKLKGGGGQGEREFQAEVEIISRVHHRHLVSLV GYCISGDQRLLVYDFVPNDTLHHHLHGRGMPVLEWSARVKIAAGSARGIAYLHEDCHPRI IHRDIKSSNILLDNNFEAQVADFGLARLAMDAVTHVTTRVMGTFGYLAPEYASSGKLTER SDVFSFGVVLLELITGRKPVDASKPLGDESLVEWARPLLTEAIETGNVGELIDSRLDKNF NEAEMFRMIEAAAACIRHSASRRPRMSQVVRVLDSLADVDLSNGIQPGKSEMFNVANTAE IRLFQRMAFGSQDFTTDFTQSSWDSRSRDVDASGSRPL

Transcript Sequence

Transcript ID	Os01t0110500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:554025:558015:-1 gene:Os01g0110500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os01t0110500-01)
Sequence	CTAGCATGTACTACTACACTCCTAATCTCTCTCTCTTTCTCGAGTGGAATCCATTGATCC ATTGTGTAGTGGGAGAGAGACTTCTCTACGCGGTCACGGGTTCCCCAGCGGAGGAGAAAG ATAGATAGAGAGAGCAAAGAGCAAAAAAATCTCTCTTTTTTCTTCTTGTTGTTTCTGCAG TTACCTTTGTCTTGCCTTCAATGCCACCGCTTTACTGCCGGATCTGAGGAAAGCTCCCAT CCTTGCTGAGTTCTTGTGCTGCTTCTTCCACAATTCTTCCTTTTGTTGAGAATTTTGCCT TCCATCTGCTTAATCGGTGACAAAGGTGGTGGGATCTTGCTTCTCTTCCTGCAAGAAAAG GCTCGTTTTTTTGTTTCGCCGTTTGCTGCTTGCTCAGGCAGGAGGAAGGCGATGCTGTTC TTGCTGATTTCAGTCTTCTTCTTCCGGTGGTCGAGGTGAGGTTTGTTGCTACTTCACCTT CGCTTCGTTGCGCTCTGCGGAGAGAAAGAAAGCAAAGGTGGTGGAAAAGAAGCGAAAATT TTGCTTGCTTCCTCTGCAAATCTGAGGAATTTTCTCGCAGAAAGCCTGAATTCCCTCTGA ATTCCGGTGCATGGAAAGATCGTCCCCTCCATTTCCAAGAAGAAGAAGATACTAGTAGCA GCTGCAGCTACACTCTAGTAGTAGTGGCTACTAGTACTAGCTAGCCTCCAATGGCGTCCT CACCGTCTCCCTCCCCGGGCACCGCAACTCCCGCCACCGCCGCCGCCGCGCCTTCCACCG CGACCCCAACACCCGCGACGCAGCCCAATGCCACGCCGGCCGACCCCTCCATCACTCCCC CGGCCGCGTCCCCTCCCCTTCCCTCCGCCGCCACGCCACCCCCACAGCCCGATTCCCCGC CGCCCTCTCCGCCACCAGCTCCTCCGGTCGCAGTGCCACCGCCGGCCACCGTGCCACCGC CGCCTGTACCCGTTGCGTCTCCACCACCAACCCCGTCAGCCACATTGCCGCCGCCGTCGC CACCGGCTTCAGTGCCGGTGCCACCTACACCTGCTACTACCCCTCCAAAGCCGTCGCCTG TGCAGCAACCCCCAGTGGCTGCATCACCACCTCCATCGTCTCCGGCTGATTTGCCGCCGC CTAATCCGCCGGCTCGCTCAGACACGCCGCCGGTAGTGCAGTCACCTCCACCGCCGCACC GGAGATCGCCGAGAACGCCATGGGCTCCACCGATGGCGCCGTCGCCTTCTGGAAGTCCTA CCAAGCCTTCTCCAGCTAGTCCATCACCAATTGCTGGAGATCCAATCATCCCTACACCCA ATAACCCTTCGTCGCCTCTGGCGACGCCATCAGCACCAGGCTCTGGTACTCCTGTGGTGA CGCCATCTGCACCAGTCTCTGGCCCTCCATCGCCAGGCACGGCTCCAGCCACGGCAGCTG ATCGATCCAACAAGTCATTAAGTCCCAACACGCAGGACGGCAGCGTCTCGTCGAGCGATG GTGGAATGAGCTCAAGTGCAAAGGCGGGCATCGGTGTAGTCGTCGCTATTCTTGTGCTTA GCTTGGTAGGAGCTGCATTTTGGTACAAGAAGAAACGGAGGAGAGCAACCGGTTACCATG CAGGATTTGTGATGCCATCGCCTGCCTCGTCTCCACAAGTGTTAGGGTATTCAGGTAAAA CTAACTACAGTGCTGGCAGTCCTGATTACAAAGAAACAATGTCAGAGTTCAGCATGGGCA ATTGTCGATTCTTCACTTACGAGGAATTGCACCAGATCACAAATGGTTTTGCAGCGAAGA ACCTGCTAGGGGAAGGTGGGTTTGGGTCTGTTTACAAGGGTTGCTTGGCTGATGGAAGAG AGGTTGCCGTTAAGAAACTGAAAGGTGGTGGTGGGCAGGGGGAACGTGAGTTCCAGGCTG AGGTGGAGATAATCAGTCGTGTGCACCACCGCCATCTAGTTTCTCTTGTTGGGTATTGCA TTTCGGGGGACCAGAGGTTGCTTGTCTATGATTTTGTGCCCAATGACACACTGCACCATC ATCTTCATGGACGTGGAATGCCGGTTTTGGAGTGGTCAGCTAGGGTTAAAATTGCAGCTG GCTCAGCTCGAGGGATAGCATATCTTCATGAAGATTGCCATCCCCGAATTATCCACCGAG ATATTAAATCCTCCAACATTTTACTGGATAATAACTTTGAAGCCCAGGTTGCTGATTTTG GCCTTGCAAGACTAGCTATGGATGCAGTCACGCATGTAACTACACGGGTGATGGGAACTT TTGGTTATCTGGCTCCGGAGTATGCTTCGAGTGGCAAGTTGACTGAGAGATCTGATGTAT TCTCTTTTGGCGTTGTTCTCTTAGAGCTTATTACCGGTAGAAAGCCTGTTGACGCATCAA AACCATTGGGTGATGAGAGCCTTGTTGAGTGGGCTAGGCCATTGCTCACAGAAGCAATTG AGACTGGCAACGTTGGGGAGCTGATTGACTCCAGGCTGGACAAGAACTTCAATGAAGCTG AAATGTTTCGAATGATCGAAGCTGCGGCAGCTTGCATTCGACATTCAGCATCTAGGAGAC CCCGGATGAGCCAGGTGGTGCGTGTTCTTGATAGCTTAGCTGACGTCGATCTAAGCAATG GTATTCAGCCTGGTAAGAGCGAAATGTTCAATGTGGCAAACACGGCAGAAATCAGGCTGT TTCAGCGGATGGCTTTTGGTAGCCAAGATTTCACAACTGATTTCACCCAATCTAGCTGGG ATAGTCGTAGTAGAGATGTTGATGCCTCTGGTTCGAGGCCCTTGTAATCATAGTCTAATA CTCCTCTAATTAGCTAGGGTATTGTTGCATTGGATTTGTTTCATCTGATTTTGTTTTCTT CTTTTTTGTGGCCATCTCTGTCAACTAGGAGTAATGTATATCATGCGTCCCACTAAGAAA AGTGTATATTGATTGCACTGAGCGTGCCTGATTCTACAAAATCTGACAGACAGAAGATTT ACTAGTACTAGCCCTTGAAGGAACCAATGAATTGCCTCTGTTGGTGGTGACTGAACCTGC ATATTCCACTCTATATTTCCTC