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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0109750-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:524671:527980:-1 gene:Os01g0109750 gene_biotype:protein_coding transcript_biotype:protein_coding description:Paired amphipathic helix domain containing protein. (Os01t0109750-01)
Sequence

ATGGCTAGAGCAAATGAGATGGTCAGGGCAGACTCAAGGATGATGGTTGTCTTTAGTGCC
CTGGCATCTAAATCAGGGCCACTGACATTTGAAGACTCGCTCAGATTTGTCAAGAAAGTG
AAGGCTTGTAACTACATGTTGTATTTGTCATTGTTTGACATTCTTGGAAGAATGGAGCTA
TCCCGGCTTGAGGCCTACCGAGAGTTACAGCTGCTGTTTCAAAATTACCCGGATTTGCAC
GAAGAGCTTGAAAAGTTTAGACCTCCAGTGCCTATAAAACATCCAGCAAACAACATTTGG
CCCTGGCTTTTTGCTTGTGCTGTTCCGCTGGTGGCAGTAAGCCTAATTCCTGCTCTCGGA
AATCCAGTGCTGTGGTTTGTCCAACAAACACTAGGTGAAAAAATGAAGGCGTAA

Peptide Sequence

PEP ID

Os01t0109750-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:524671:527980:-1 gene:Os01g0109750 transcript:Os01t0109750-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Paired amphipathic helix domain containing protein. (Os01t0109750-01)
Sequence

MARANEMVRADSRMMVVFSALASKSGPLTFEDSLRFVKKVKACNYMLYLSLFDILGRMEL
SRLEAYRELQLLFQNYPDLHEELEKFRPPVPIKHPANNIWPWLFACAVPLVAVSLIPALG
NPVLWFVQQTLGEKMKA

Transcript Sequence

Transcript ID

Os01t0109750-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:524671:527980:-1 gene:Os01g0109750 gene_biotype:protein_coding transcript_biotype:protein_coding description:Paired amphipathic helix domain containing protein. (Os01t0109750-01)
Sequence

CTTGGAATATTCCAAGCTTGCGGGACTAGCCACTAGCCAGCCCAGCCAGGGGAAGGGGAG
GAGCTGCAAGCCCAACCCCCTGCTCAACCCTAAATTGCTTCCGCCGATCGCCCAGGGACT
AGAGTGTTACTATGGCTAGAGCAAATGAGATGGTCAGGGCAGACTCAAGGATGATGGTTG
TCTTTAGTGCCCTGGCATCTAAATCAGGGCCACTGACATTTGAAGACTCGCTCAGATTTG
TCAAGAAAGTGAAGGCTTGTAACTACATGTTGTATTTGTCATTGTTTGACATTCTTGGAA
GAATGGAGCTATCCCGGCTTGAGGCCTACCGAGAGTTACAGCTGCTGTTTCAAAATTACC
CGGATTTGCACGAAGAGCTTGAAAAGTTTAGACCTCCAGTGCCTATAAAACATCCAGCAA
ACAACATTTGGCCCTGGCTTTTTGCTTGTGCTGTTCCGCTGGTGGCAGTAAGCCTAATTC
CTGCTCTCGGAAATCCAGTGCTGTGGTTTGTCCAACAAACACTAGGTGAAAAAATGAAGG
CGTAATTCCAACTATCCTGCAGCTTGGATATGTGCTCCACTTCATGTCATTTATCCCATC
GATGACTGTAATTATTAATGTGCTCGCATGTGTATATATTTAGAGAGACATCCCAGGAAA
TTTCGGTTTTATTGGGCATCAAGTAGGGAGAAAGGAAAATTAGTCACCACTTGCAGGAAG
CAGCAACATTATGCTCCTGAATTTGTTTGGAGTATTAGTCCAAGATGATTTCAGGCTTTC
AGCTGCCTGCTATAACGATACCGCATTTCAGAGTACAAGAGTTGAACTGTTAAGTCTTTT
AGAGACAATCAACTATCGGGGCATTTAACTTTTTTGTCACTTTTTAAGACTTGTCAATTA
AGAATTTATCACTCATAGTTTATAACATATGGGCCCTCATATGTCTATGTCTCTATGACA
TGTGGGTTCAGTGGT