Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0106900-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:374752:380534:-1 gene:Os01g0106900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:1-deoxy-D-xylulose 5-phosphate reductoisomerase, DXP reductoisomerase description:Similar to 1-deoxy-D-xylulose 5-phosphate reductoisomerase (Fragment). (Os01t0106900-01);Similar to 1-deoxy-D-xylulose 5-phosphate reductoisomerase (Fragment). (Os01t0106900-02)
Sequence	ATGGCGCTCAAGGTCGTCTCTTTCCCCGGGGACTTGGCCGCGGTCTCATTCCTCGACTCC AACAGAGGAGGAGCTTTCAACCAGCTCAAAGTGGACCTCCCGTTTCAAACGAGGGACAGA AGAGCAGTTTCCCTGAGAAGGACTTGCTGTTCAATGCAACAGGCTCCACCACCAGCATGG CCTGGTCGAGCCGTTGTTGAACCTGGGAGGAGGTCATGGGATGGCCCCAAGCCTATCTCA ATTGTTGGCTCAACCGGTTCTATTGGCACACAGACATTGGACATAGTTGCGGAGAATCCA GATAAATTCCGGGTTGTTGCTCTTGCTGCTGGCTCCAATGTGACTCTTCTAGCTGATCAG GTGAAAACATTCAAACCAAAGCTTGTTGCTGTAAGAAATGAGTCATTAGTTGATGAGCTA AAGGAAGCCTTAGCTGATTGTGATTGGAAGCCAGAAATTATTCCTGGTGAGCAAGGTGTC ATAGAGGTTGCTCGCCACCCAGATGCAGTTACAGTTGTTACTGGGATAGTAGGGTGTGCA GGACTGAAGCCTACAGTTGCTGCAATTGAAGCTGGGAAAGATATAGCATTGGCGAACAAA GAGACACTTATTGCAGGTGGTCCTTTTGTGCTTCCCCTTGCACAAAAGCACAAAGTGAAA ATACTTCCTGCTGATTCTGAGCACTCTGCTATATTTCAGTGTATACAAGGCTTGCCCGAA GGAGCACTTCGCCGCATTATTTTGACTGCATCAGGTGGTGCTTTCAGGGACTGGCCAGTT GACAAGTTGAAAGAAGTAAAAGTTGCTGATGCTTTAAAGCACCCGAACTGGAATATGGGG AAGAAGATTACTGTAGATTCTGCTACATTATTCAACAAGGGTTTAGAAGTTATTGAAGCA CATTATTTATTTGGTGCTGAATACGATGACATTGAAATTGTGATCCACCCACAATCTATC ATACACTCTATGATTGAAACCCAGGATTCATCTGTGTTGGCTCAACTGGGATGGCCAGAT ATGCGGATACCAATCTTATACACCATGTCTTGGCCAGACAGAATCTATTGCTCAGAGGTC ACCTGGCCCCGACTAGATCTTTGCAAGCTGGGTTCACTGACATTCAAAGCTCCTGACAAT GTGAAATACCCGTCGATGGATCTCGCCTATGCAGCTGGAAGAGCTGGGGGCACCATGACA GGAGTTCTGAGTGCTGCTAATGAGAAGGCTGTGGAGTTGTTCATCGATGAAAAGATCGGG TACCTGGACATCTTCAAGGTGGTGGAGCTGACATGCGACGCTCATCGGAATGAGCTAGTA ACAAGGCCATCACTGGAGGAGATCATACATTATGATCTGTGGGCGAGGGAGTATGCTGCC AGCCTACAGCCATCCACTGGCCTCAGCCCTGTACCTGTCTAG

Peptide Sequence

PEP ID	Os01t0106900-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:374752:380534:-1 gene:Os01g0106900 transcript:Os01t0106900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:1-deoxy-D-xylulose 5-phosphate reductoisomerase, DXP reductoisomerase description:Similar to 1-deoxy-D-xylulose 5-phosphate reductoisomerase (Fragment). (Os01t0106900-01);Similar to 1-deoxy-D-xylulose 5-phosphate reductoisomerase (Fragment). (Os01t0106900-02)
Sequence	MALKVVSFPGDLAAVSFLDSNRGGAFNQLKVDLPFQTRDRRAVSLRRTCCSMQQAPPPAW PGRAVVEPGRRSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQ VKTFKPKLVAVRNESLVDELKEALADCDWKPEIIPGEQGVIEVARHPDAVTVVTGIVGCA GLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAQKHKVKILPADSEHSAIFQCIQGLPE GALRRIILTASGGAFRDWPVDKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEA HYLFGAEYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRIPILYTMSWPDRIYCSEV TWPRLDLCKLGSLTFKAPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVELFIDEKIG YLDIFKVVELTCDAHRNELVTRPSLEEIIHYDLWAREYAASLQPSTGLSPVPV

Transcript Sequence

Transcript ID	Os01t0106900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:374752:380534:-1 gene:Os01g0106900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:1-deoxy-D-xylulose 5-phosphate reductoisomerase, DXP reductoisomerase description:Similar to 1-deoxy-D-xylulose 5-phosphate reductoisomerase (Fragment). (Os01t0106900-01);Similar to 1-deoxy-D-xylulose 5-phosphate reductoisomerase (Fragment). (Os01t0106900-02)
Sequence	ATCCCGACCAGACGTCGAGTCGAGCATTAACTCAGTCAGGGTGGCCATGGCGCTCAAGGT CGTCTCTTTCCCCGGGGACTTGGCCGCGGTCTCATTCCTCGACTCCAACAGAGGAGGAGC TTTCAACCAGCTCAAAGTGGACCTCCCGTTTCAAACGAGGGACAGAAGAGCAGTTTCCCT GAGAAGGACTTGCTGTTCAATGCAACAGGCTCCACCACCAGCATGGCCTGGTCGAGCCGT TGTTGAACCTGGGAGGAGGTCATGGGATGGCCCCAAGCCTATCTCAATTGTTGGCTCAAC CGGTTCTATTGGCACACAGACATTGGACATAGTTGCGGAGAATCCAGATAAATTCCGGGT TGTTGCTCTTGCTGCTGGCTCCAATGTGACTCTTCTAGCTGATCAGGTGAAAACATTCAA ACCAAAGCTTGTTGCTGTAAGAAATGAGTCATTAGTTGATGAGCTAAAGGAAGCCTTAGC TGATTGTGATTGGAAGCCAGAAATTATTCCTGGTGAGCAAGGTGTCATAGAGGTTGCTCG CCACCCAGATGCAGTTACAGTTGTTACTGGGATAGTAGGGTGTGCAGGACTGAAGCCTAC AGTTGCTGCAATTGAAGCTGGGAAAGATATAGCATTGGCGAACAAAGAGACACTTATTGC AGGTGGTCCTTTTGTGCTTCCCCTTGCACAAAAGCACAAAGTGAAAATACTTCCTGCTGA TTCTGAGCACTCTGCTATATTTCAGTGTATACAAGGCTTGCCCGAAGGAGCACTTCGCCG CATTATTTTGACTGCATCAGGTGGTGCTTTCAGGGACTGGCCAGTTGACAAGTTGAAAGA AGTAAAAGTTGCTGATGCTTTAAAGCACCCGAACTGGAATATGGGGAAGAAGATTACTGT AGATTCTGCTACATTATTCAACAAGGGTTTAGAAGTTATTGAAGCACATTATTTATTTGG TGCTGAATACGATGACATTGAAATTGTGATCCACCCACAATCTATCATACACTCTATGAT TGAAACCCAGGATTCATCTGTGTTGGCTCAACTGGGATGGCCAGATATGCGGATACCAAT CTTATACACCATGTCTTGGCCAGACAGAATCTATTGCTCAGAGGTCACCTGGCCCCGACT AGATCTTTGCAAGCTGGGTTCACTGACATTCAAAGCTCCTGACAATGTGAAATACCCGTC GATGGATCTCGCCTATGCAGCTGGAAGAGCTGGGGGCACCATGACAGGAGTTCTGAGTGC TGCTAATGAGAAGGCTGTGGAGTTGTTCATCGATGAAAAGATCGGGTACCTGGACATCTT CAAGGTGGTGGAGCTGACATGCGACGCTCATCGGAATGAGCTAGTAACAAGGCCATCACT GGAGGAGATCATACATTATGATCTGTGGGCGAGGGAGTATGCTGCCAGCCTACAGCCATC CACTGGCCTCAGCCCTGTACCTGTCTAGTACTTGTAGCAATACAAAATTACAGTAGCATT GTACACTACTGCCGTGCCAGCTCCATGCATAGTCAGCAGCTGGCCACTCTCTAGCTATAT CTAGATGCGAGAGAATTTTAAGGATGTAAATCATGCCTTCACATGAATAAATCGTTCGTC CGTGCGTTGTGTATTCATGTAAATTTTGACGGATGGTCAAGTAAAAATAACAATGGCAAA TTAATTTAGGGAAGAA