Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0105900-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:309520:313170:-1 gene:Os01g0105900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carbohydrate/purine kinase domain containing protein. (Os01t0105900-01)
Sequence

ATGGGCGCGGAGGCAGAGCACCGCATGTCTCCCTCCCCCGCTCCCGCTCCCGCTCCCCCT
ACCCCTGTTGGGAGGACCGACGGCGACGCCCCTCCCATGGTGCTGGGCCTGCAGCTGTCG
GCGCTCATCGACCACGTCGCGCGCGTCGACTGGTCCCTCCTCAACCGCATCCCCGGCGAC
CGCGGCGGTTCACAGCAGGTCTGTATTGAGGAGTTGAATCATATTCTGGCTGAAGTGAAT
GCTCAAATCCTCCCTTGCCGTGATGACCTTTCTTCAATAAGGACTATAGCCGGTGGTAGT
GTCGCCAACACAATTCGAGGTCTCTCAGCAGGTTTTGGGATATCAACTGGAATAATTGGA
GCTTGTGGAGATGACAGCCAGGGCGTTTTGTTTGTCAGCAACATGAGCTTTAGTGGAGTA
GACCTCACAAGATTAAGGACAAAAAAGGGGCACACTGCTCAGTGTGCATGCTTGGTCGAT
GCAAGTGGCAATCGCACCATGCGCCCTTGCCTATCTAGTGCAGTCAAGCTCCAGGCCAAC
GAGTTCAAAAAGGAGGACTTCAAAGGCTCCAAGTGGTTGGTTGTACGATATGCAAGACAG
AACATGGAACAGATCCTTGAAGCTATTAGGATTGCTAAACAAGAAGGTCTCTCAGTATCA
TTGGATTTGGCTAGTTTTGAGATGGTTCGTGACTATAGGACACAACTCATTGACCTTTTG
GAAACTGGCAACATTGACCTTTGCTTTGCCAATGAGGATGAAGCTAGAGAGCTTCTAGGG
GGAGAGCTGACATTTGATCCAGAGGAGGCACTTGCTTTCTTGGCCAAGTACTGTAAATGG
GCCGTGGTGACCCTAGCTTCTAAGGGATGCATAGCGAAGCATGGGAAGCAGGTGGTTCAA
GTGGCGGCAACCGGGGAGAGTAATGCGGTGGACGCGACGGGGGCGGGGGATCTGTTTGCG
AGCGGGTTCCTGTACGGGTTGGTGAAAGGGCTGGCATTGGAGGAGTGCTGCAAGGTAGGG
GCGTGCAGCGGTGGGTCAGTGGTGAGGGCTCTGGGCGGGGAGGTGAGGCCGGAGAACTGG
CAGTGGATGTACAAGCAGATGAACGCCAGTGGCCTGCTGCTCCCTGACCTCAAGAACTGA

Peptide Sequence

PEP ID

Os01t0105900-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:309520:313170:-1 gene:Os01g0105900 transcript:Os01t0105900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carbohydrate/purine kinase domain containing protein. (Os01t0105900-01)
Sequence

MGAEAEHRMSPSPAPAPAPPTPVGRTDGDAPPMVLGLQLSALIDHVARVDWSLLNRIPGD
RGGSQQVCIEELNHILAEVNAQILPCRDDLSSIRTIAGGSVANTIRGLSAGFGISTGIIG
ACGDDSQGVLFVSNMSFSGVDLTRLRTKKGHTAQCACLVDASGNRTMRPCLSSAVKLQAN
EFKKEDFKGSKWLVVRYARQNMEQILEAIRIAKQEGLSVSLDLASFEMVRDYRTQLIDLL
ETGNIDLCFANEDEARELLGGELTFDPEEALAFLAKYCKWAVVTLASKGCIAKHGKQVVQ
VAATGESNAVDATGAGDLFASGFLYGLVKGLALEECCKVGACSGGSVVRALGGEVRPENW
QWMYKQMNASGLLLPDLKN

Transcript Sequence

Transcript ID

Os01t0105900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:309520:313170:-1 gene:Os01g0105900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carbohydrate/purine kinase domain containing protein. (Os01t0105900-01)
Sequence

GGAGCCTGGACCTGGAGGAGCGGTGCGTTCTCCTTCTCCCTCCCCGGCCCCTAGCCGCCG
CACCCCCACCCTCGCCCGCCTCTCGCCGTCGCCGGAACGGAAAATCATGGGCGCGGAGGC
AGAGCACCGCATGTCTCCCTCCCCCGCTCCCGCTCCCGCTCCCCCTACCCCTGTTGGGAG
GACCGACGGCGACGCCCCTCCCATGGTGCTGGGCCTGCAGCTGTCGGCGCTCATCGACCA
CGTCGCGCGCGTCGACTGGTCCCTCCTCAACCGCATCCCCGGCGACCGCGGCGGTTCACA
GCAGGTCTGTATTGAGGAGTTGAATCATATTCTGGCTGAAGTGAATGCTCAAATCCTCCC
TTGCCGTGATGACCTTTCTTCAATAAGGACTATAGCCGGTGGTAGTGTCGCCAACACAAT
TCGAGGTCTCTCAGCAGGTTTTGGGATATCAACTGGAATAATTGGAGCTTGTGGAGATGA
CAGCCAGGGCGTTTTGTTTGTCAGCAACATGAGCTTTAGTGGAGTAGACCTCACAAGATT
AAGGACAAAAAAGGGGCACACTGCTCAGTGTGCATGCTTGGTCGATGCAAGTGGCAATCG
CACCATGCGCCCTTGCCTATCTAGTGCAGTCAAGCTCCAGGCCAACGAGTTCAAAAAGGA
GGACTTCAAAGGCTCCAAGTGGTTGGTTGTACGATATGCAAGACAGAACATGGAACAGAT
CCTTGAAGCTATTAGGATTGCTAAACAAGAAGGTCTCTCAGTATCATTGGATTTGGCTAG
TTTTGAGATGGTTCGTGACTATAGGACACAACTCATTGACCTTTTGGAAACTGGCAACAT
TGACCTTTGCTTTGCCAATGAGGATGAAGCTAGAGAGCTTCTAGGGGGAGAGCTGACATT
TGATCCAGAGGAGGCACTTGCTTTCTTGGCCAAGTACTGTAAATGGGCCGTGGTGACCCT
AGCTTCTAAGGGATGCATAGCGAAGCATGGGAAGCAGGTGGTTCAAGTGGCGGCAACCGG
GGAGAGTAATGCGGTGGACGCGACGGGGGCGGGGGATCTGTTTGCGAGCGGGTTCCTGTA
CGGGTTGGTGAAAGGGCTGGCATTGGAGGAGTGCTGCAAGGTAGGGGCGTGCAGCGGTGG
GTCAGTGGTGAGGGCTCTGGGCGGGGAGGTGAGGCCGGAGAACTGGCAGTGGATGTACAA
GCAGATGAACGCCAGTGGCCTGCTGCTCCCTGACCTCAAGAACTGAAGAAAAAGAAAAAA
GGGCTTGCCTTTTACTTGTCAAGCTTCCAAGAAAGAAACAAAGATTCAGACCATGGTCAT
TGATGGCTTGATTGTTTGTTAGTTAGACCTCCTATGCTCGGTTTCTTTCTTTGTTTCTTA
ATTTGTGAGATGAGATGAATGGAATGGATGGTGGTAACCTGCACTGCACTACAAGTCTCG
CTGATTATTCAATTTGCTCGAGAAAACTCATATATATATATATAGTATAATAAAGTAACA
TAAAAGTTTGGATGTATGAAAATCTGAACGTGTTTGTTGTCAGCTGTC