Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0104900-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:270250:271518:-1 gene:Os01g0104900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase family protein. (Os01t0104900-01);Hypothetical conserved gene. (Os01t0104900-02)
Sequence

ATGGTAGTGTGTACAGCCATCAGCCACTGCGTCTGCGACGGCATCGCAACCGCCAACTTC
CTCCACGCCTGGGCCGCCTTCGCCGCAGCCGACCTGGACCTCGCCGCCGATCGTGACGAC
GACCTCTCCGTCGTCCTCCATGACCGCCGCGCCTTGCGCCCGCGCTGCCCTCCGCGCGTC
GCCTTCACGCACCCGGAGTACCACACCAGCAGCAGCAGCAGCAGCCTCCTCCTCATCCAG
CCCCAGCTGATGCCGCTGGCCCCCGTCTCCCTGACCTTCACAGCGGCCCACCTCCGGCGC
CTCAAGGCCCGGTCGCTCCGCAGCTGCACCTCCTTCGAGGCGCTGGCGGCGCACGTGTGG
CGCGCCTGGGTCCTCTCCCTCGCCCCGCCGCCCCCGCCCGACATGCGCGTCAAGCTCCTC
TTCTCCGTCAACGTGCGCCGCCGCCTCAAGCCGGAGCTCCCCTGGACCTACTGCGGCAAC
GCCTTCGTGCTGGCCTGCGCCGAGGCCACGCCGACCGAGCTGGCGGCGGGTGCCGGGGTG
CGGCTGGTGCAGGAGGCCAAGGACTGCATCGACGACGACTACGTGCGATCCACCGTGGAC
CTCCTCGACCAGCGGCGCGGCGCCAAGCCGGACCTGGCGGCGACGCTGGTCATCTCGGCG
TGGACGCGGCTGGGGCTGGAGGACGTCGACTTCGGCAAGGGGAGGGCGGCGCACATGGGC
CCCCTCACCAGCGAGATTTACTGCGTCTTCCTCCCCGTCCTCGCCGACCCCAACGCCGTC
ACCGTCCTGCTCTCGTTGCCGCAACCCGCCGCCGACACCTTCGAGCACCATTGCTGCAGC
TGCTTCCTCCTCGACCTCGACGACGACCAGCCCGCCGTACCCGTACTAGTGGACAAGCAG
GACCACGACAACCAGCTCGTGCGTGCCCATCATCAACATGACATCCTCGCCTAG

Peptide Sequence

PEP ID

Os01t0104900-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:270250:271518:-1 gene:Os01g0104900 transcript:Os01t0104900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase family protein. (Os01t0104900-01);Hypothetical conserved gene. (Os01t0104900-02)
Sequence

MVVCTAISHCVCDGIATANFLHAWAAFAAADLDLAADRDDDLSVVLHDRRALRPRCPPRV
AFTHPEYHTSSSSSSLLLIQPQLMPLAPVSLTFTAAHLRRLKARSLRSCTSFEALAAHVW
RAWVLSLAPPPPPDMRVKLLFSVNVRRRLKPELPWTYCGNAFVLACAEATPTELAAGAGV
RLVQEAKDCIDDDYVRSTVDLLDQRRGAKPDLAATLVISAWTRLGLEDVDFGKGRAAHMG
PLTSEIYCVFLPVLADPNAVTVLLSLPQPAADTFEHHCCSCFLLDLDDDQPAVPVLVDKQ
DHDNQLVRAHHQHDILA

Transcript Sequence

Transcript ID

Os01t0104900-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:270250:271518:-1 gene:Os01g0104900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase family protein. (Os01t0104900-01);Hypothetical conserved gene. (Os01t0104900-02)
Sequence

ACACTACAGTCTACAGTGCAGTGCAGTACTCCCTCAGATTGATCGATCGATCAGATGGTG
TCGTGACACAACTGGGGTGCGGAGGCATGGTAGTGTGTACAGCCATCAGCCACTGCGTCT
GCGACGGCATCGCAACCGCCAACTTCCTCCACGCCTGGGCCGCCTTCGCCGCAGCCGACC
TGGACCTCGCCGCCGATCGTGACGACGACCTCTCCGTCGTCCTCCATGACCGCCGCGCCT
TGCGCCCGCGCTGCCCTCCGCGCGTCGCCTTCACGCACCCGGAGTACCACACCAGCAGCA
GCAGCAGCAGCCTCCTCCTCATCCAGCCCCAGCTGATGCCGCTGGCCCCCGTCTCCCTGA
CCTTCACAGCGGCCCACCTCCGGCGCCTCAAGGCCCGGTCGCTCCGCAGCTGCACCTCCT
TCGAGGCGCTGGCGGCGCACGTGTGGCGCGCCTGGGTCCTCTCCCTCGCCCCGCCGCCCC
CGCCCGACATGCGCGTCAAGCTCCTCTTCTCCGTCAACGTGCGCCGCCGCCTCAAGCCGG
AGCTCCCCTGGACCTACTGCGGCAACGCCTTCGTGCTGGCCTGCGCCGAGGCCACGCCGA
CCGAGCTGGCGGCGGGTGCCGGGGTGCGGCTGGTGCAGGAGGCCAAGGACTGCATCGACG
ACGACTACGTGCGATCCACCGTGGACCTCCTCGACCAGCGGCGCGGCGCCAAGCCGGACC
TGGCGGCGACGCTGGTCATCTCGGCGTGGACGCGGCTGGGGCTGGAGGACGTCGACTTCG
GCAAGGGGAGGGCGGCGCACATGGGCCCCCTCACCAGCGAGATTTACTGCGTCTTCCTCC
CCGTCCTCGCCGACCCCAACGCCGTCACCGTCCTGCTCTCGTTGCCGCAACCCGCCGCCG
ACACCTTCGAGCACCATTGCTGCAGCTGCTTCCTCCTCGACCTCGACGACGACCAGCCCG
CCGTACCCGTACTAGTGGACAAGCAGGACCACGACAACCAGCTCGTGCGTGCCCATCATC
AACATGACATCCTCGCCTAGTAGCTTCTTAATTAATGCACTACTAATTAACTACTATTTC
CATCCCAAAATATAATAATTTTTACTACCTCCGTTCCAAAATACAATTATCTCTGCTTTA
CAACTC