Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0104000-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:206131:209581:-1 gene:Os01g0104000 gene_biotype:protein_coding transcript_biotype:protein_coding description:C-type lectin domain containing protein. (Os01t0104000-01);Similar to predicted protein. (Os01t0104000-02)
Sequence	ATGGCGGCGGCCATCCTCCGCTTCTTCTTCTTCTTCTTCTTCTTCATCCTGCCCGCCTCC CTCACCGCCACCGCCTCCACCTCCACCTCATCATGCCCTGATGGTTGGCAAATCACTCCT GCTCTCGACAAGTGTTTCATCTACATACCTACACCCCTTTCTTGGGACAGATCCGAGGCT CTCTGCCGCAACAACTTCACCGCTCATTTGGCTGCCCTATCATCACTTCAAGACCTCAAT CTTGCAAAGTCTCTCTGTGGACCTTCCCCCTCTGGATGCTGGGTCGGAGGTCATCGCAAC AACACTGCCTCGGCTTTTGCTTGGAAATGGTCCGATGATTCATCTTCTTGGAATGATACT GCCTTCCCTGCTGACCCATTGCGCGCCAACTGCAGCACTACTGGGTGTGCTCTTGCTACC ACCAATGATGCATGCACTTTGGTTACCAATACCCATGCCGCACTTACCGCAAAAAGATGC AGCGACTCACATGGACTCATCTGTATGATCAATCATGACCGATGCTACCATGATCACTGC CACAAGGAGTATTTCATAGTGCTCGTCGTTGTAAGCGGATTCATTCTCTTGACCACTCTA GCAGTAGTAGTTTGGCTACTTGTCTATAGGCGAAGCAAGAGGAGGAGAAGATCGCGTGAA GGTTCCAGTACTTCAGCTACCGCGTTAGTTCCACCGCTATGGAAAGTGTTCACCAGTGAA GAACTTAGATCAATCACAAAGAACTTCAGTGAGGGCAACCGGCTTCCTGGGAATGCAAAG ACTGGTGGAACCTATAGCGGAATTTTGCCAGATGGATCCAGAGTAGCAATCAAGAGGCTG AAGAGATCAAGCCTACAAAGGAAAAAAGATTTCTACTCTGAGATTGGGAGAGTTGCAAAG CTGTATCATCCTAATTTAGTTGCAGTAAAAGGATGTTGTTACGATCATGGTGACCGCTTT ATTGTTTATGAGTTTGTTGCCAATGGGCCGTTGGATGTTTGGCTACATCATGTCCCTAGA GGAGGGCGGTGCCTTGATTGGCCAATGAGGATGAGAGTTGCTACAACTCTTGCACAAGGG ATCGCATTTTTGCATGACAAGGTGAAGCCGCAGGTCGTGCACCGTGATATCCGTGCAAGC AACGTGCTACTTGACGAGGAATTTGGTTCCCATCTGATGGGGGTTGGGCTGTCCAAGTTT GTACCATGGGAAGTAATGCACGAGAGGACTGTGAAGGCTGCAACCTATGGGTACCTTGCT CCTGAATTCATATACAGGAATGAACTGACAACAAAGAGCGATGTCTACAGCTTTGGTGTG CTCCTTCTAGAGATCATCAGTGGCCGTCGGCCTACTCAGTCTGTCGAGTCTGTTGGATGG CAGACTATATTTGAGTGGGCAACACCTCTAGTCCAGTCACACCGGTACCTAGAGCTGTTA GACCCACTGATTCAGGAGTTGCCAGATGTAGGTGTCATCCAGAAAGTTGTTGACTTGGTC TATGCCTGCACCCAGCATGTCCCTTCGGTGCGACCAAGGATGTCTCATGTGGTCCATCAG CTCCAGCAACTTGAGCTAAAGTCAGCAGCATCAGAACAACTGAGCGGCACAAGCACTAGC GCTACATCTCCAATGTTACCATTGGAGGTTCGGACTCCTCGCTGA

Peptide Sequence

PEP ID	Os01t0104000-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:206131:209581:-1 gene:Os01g0104000 transcript:Os01t0104000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:C-type lectin domain containing protein. (Os01t0104000-01);Similar to predicted protein. (Os01t0104000-02)
Sequence	MAAAILRFFFFFFFFILPASLTATASTSTSSCPDGWQITPALDKCFIYIPTPLSWDRSEA LCRNNFTAHLAALSSLQDLNLAKSLCGPSPSGCWVGGHRNNTASAFAWKWSDDSSSWNDT AFPADPLRANCSTTGCALATTNDACTLVTNTHAALTAKRCSDSHGLICMINHDRCYHDHC HKEYFIVLVVVSGFILLTTLAVVVWLLVYRRSKRRRRSREGSSTSATALVPPLWKVFTSE ELRSITKNFSEGNRLPGNAKTGGTYSGILPDGSRVAIKRLKRSSLQRKKDFYSEIGRVAK LYHPNLVAVKGCCYDHGDRFIVYEFVANGPLDVWLHHVPRGGRCLDWPMRMRVATTLAQG IAFLHDKVKPQVVHRDIRASNVLLDEEFGSHLMGVGLSKFVPWEVMHERTVKAATYGYLA PEFIYRNELTTKSDVYSFGVLLLEIISGRRPTQSVESVGWQTIFEWATPLVQSHRYLELL DPLIQELPDVGVIQKVVDLVYACTQHVPSVRPRMSHVVHQLQQLELKSAASEQLSGTSTS ATSPMLPLEVRTPR

Transcript Sequence

Transcript ID	Os01t0104000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:206131:209581:-1 gene:Os01g0104000 gene_biotype:protein_coding transcript_biotype:protein_coding description:C-type lectin domain containing protein. (Os01t0104000-01);Similar to predicted protein. (Os01t0104000-02)
Sequence	GTTCATCATCAAGGAAGGAAGGGCAAGGCCGCAAGGGAAGACACGGATCGGCGGCCATGG CGGCGGCCATCCTCCGCTTCTTCTTCTTCTTCTTCTTCTTCATCCTGCCCGCCTCCCTCA CCGCCACCGCCTCCACCTCCACCTCATCATGCCCTGATGGTTGGCAAATCACTCCTGCTC TCGACAAGTGTTTCATCTACATACCTACACCCCTTTCTTGGGACAGATCCGAGGCTCTCT GCCGCAACAACTTCACCGCTCATTTGGCTGCCCTATCATCACTTCAAGACCTCAATCTTG CAAAGTCTCTCTGTGGACCTTCCCCCTCTGGATGCTGGGTCGGAGGTCATCGCAACAACA CTGCCTCGGCTTTTGCTTGGAAATGGTCCGATGATTCATCTTCTTGGAATGATACTGCCT TCCCTGCTGACCCATTGCGCGCCAACTGCAGCACTACTGGGTGTGCTCTTGCTACCACCA ATGATGCATGCACTTTGGTTACCAATACCCATGCCGCACTTACCGCAAAAAGATGCAGCG ACTCACATGGACTCATCTGTATGATCAATCATGACCGATGCTACCATGATCACTGCCACA AGGAGTATTTCATAGTGCTCGTCGTTGTAAGCGGATTCATTCTCTTGACCACTCTAGCAG TAGTAGTTTGGCTACTTGTCTATAGGCGAAGCAAGAGGAGGAGAAGATCGCGTGAAGGTT CCAGTACTTCAGCTACCGCGTTAGTTCCACCGCTATGGAAAGTGTTCACCAGTGAAGAAC TTAGATCAATCACAAAGAACTTCAGTGAGGGCAACCGGCTTCCTGGGAATGCAAAGACTG GTGGAACCTATAGCGGAATTTTGCCAGATGGATCCAGAGTAGCAATCAAGAGGCTGAAGA GATCAAGCCTACAAAGGAAAAAAGATTTCTACTCTGAGATTGGGAGAGTTGCAAAGCTGT ATCATCCTAATTTAGTTGCAGTAAAAGGATGTTGTTACGATCATGGTGACCGCTTTATTG TTTATGAGTTTGTTGCCAATGGGCCGTTGGATGTTTGGCTACATCATGTCCCTAGAGGAG GGCGGTGCCTTGATTGGCCAATGAGGATGAGAGTTGCTACAACTCTTGCACAAGGGATCG CATTTTTGCATGACAAGGTGAAGCCGCAGGTCGTGCACCGTGATATCCGTGCAAGCAACG TGCTACTTGACGAGGAATTTGGTTCCCATCTGATGGGGGTTGGGCTGTCCAAGTTTGTAC CATGGGAAGTAATGCACGAGAGGACTGTGAAGGCTGCAACCTATGGGTACCTTGCTCCTG AATTCATATACAGGAATGAACTGACAACAAAGAGCGATGTCTACAGCTTTGGTGTGCTCC TTCTAGAGATCATCAGTGGCCGTCGGCCTACTCAGTCTGTCGAGTCTGTTGGATGGCAGA CTATATTTGAGTGGGCAACACCTCTAGTCCAGTCACACCGGTACCTAGAGCTGTTAGACC CACTGATTCAGGAGTTGCCAGATGTAGGTGTCATCCAGAAAGTTGTTGACTTGGTCTATG CCTGCACCCAGCATGTCCCTTCGGTGCGACCAAGGATGTCTCATGTGGTCCATCAGCTCC AGCAACTTGAGCTAAAGTCAGCAGCATCAGAACAACTGAGCGGCACAAGCACTAGCGCTA CATCTCCAATGTTACCATTGGAGGTTCGGACTCCTCGCTGAAATCCACTGCTAGAGGAAA ACCAATTCAGTAGTTTCCGATGTCAGTCAGCTGGCAGCACATCTATTGAAGTGTCTGCTT AACTAGTACTAGGAGAAGTACTTGAGGGGAGAAGTTAGGACCCCCATAGGCCAAACCAAA TTAACCTTTGTGTAGCAATGGGCTGTTTGTTGTTAAAATGGTCATTGCCCATGTGTACTT GAGTTGGCCTCTATGTAGAAGATATCAGTTTAGTGAGCACAAATTTCTGAATGGTTGTAA TAGTGACCTTATCTATATATCTACATTTGATAGAAGGTGTGATAATATCTTCCTGTCTCT