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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0103600-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:186250:190262:-1 gene:Os01g0103600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to sterol-8,7-isomerase. (Os01t0103600-01);Emopamil-binding family protein. (Os01t0103600-02)
Sequence

ATGGGGCACCCCCACCCCCACCCTTACGCGCCGGCGGAGCTTCACCTCCCGGGCTTCGTG
CCTCTCCAACTGTCCCAGGCCCAAATCCTCGTGCCCTACCTCGCCACCTCCCTCTTCCTC
CTCCTCGCCGTCTGGCTCATCTCCGGGAGATGCAGTCGTAGGCTTTCCGACACCGACCGC
TGGCTCATGTGCTGGTGGGCCTTCACCGGCCTCACCCACATTATCATCGAGGGAACCTTT
GTCTTTGCTCCTAATTTCTTCTCCAACCAAAACCCTTCTTACTTCGATGAAGTTTGGAAA
GAGTACAGCAAAGGTGACTCCAGATATGTCGCCAGAGACCCTGCTACTGTTACAGTTGAA
GGAATTACAGCTGTCTTGGAAGGCCCTGCTTCACTCCTTGCTGTCTATGCCATCGCATCG
GGCAAGTCCTACAGCCATATCCTCCAGTTCACTGTCTGTCTTGGTCAGCTCTATGGATGC
CTGGTGTACTTTATTACAGCCTACTTGGATGGCTTCAACTTCTGGACTAGCCCGTTCTAC
TTCTGGGCTTATTTCATTGGTGCAAACAGCTCGTGGGTTGTTATACCAACTATGATCGCC
ATAAGGAGCTGGAAGAAGATTTGTGCAGCATTTCAAGGTGAAAAGGTGAAGACTAAATAG

Peptide Sequence

PEP ID

Os01t0103600-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:186250:190262:-1 gene:Os01g0103600 transcript:Os01t0103600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to sterol-8,7-isomerase. (Os01t0103600-01);Emopamil-binding family protein. (Os01t0103600-02)
Sequence

MGHPHPHPYAPAELHLPGFVPLQLSQAQILVPYLATSLFLLLAVWLISGRCSRRLSDTDR
WLMCWWAFTGLTHIIIEGTFVFAPNFFSNQNPSYFDEVWKEYSKGDSRYVARDPATVTVE
GITAVLEGPASLLAVYAIASGKSYSHILQFTVCLGQLYGCLVYFITAYLDGFNFWTSPFY
FWAYFIGANSSWVVIPTMIAIRSWKKICAAFQGEKVKTK

Transcript Sequence

Transcript ID

Os01t0103600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:186250:190262:-1 gene:Os01g0103600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to sterol-8,7-isomerase. (Os01t0103600-01);Emopamil-binding family protein. (Os01t0103600-02)
Sequence

CTCTCCAGTCCAGATCGGAAGGAAGCCAGGAATGGGGCACCCCCACCCCCACCCTTACGC
GCCGGCGGAGCTTCACCTCCCGGGCTTCGTGCCTCTCCAACTGTCCCAGGCCCAAATCCT
CGTGCCCTACCTCGCCACCTCCCTCTTCCTCCTCCTCGCCGTCTGGCTCATCTCCGGGAG
ATGCAGTCGTAGGCTTTCCGACACCGACCGCTGGCTCATGTGCTGGTGGGCCTTCACCGG
CCTCACCCACATTATCATCGAGGGAACCTTTGTCTTTGCTCCTAATTTCTTCTCCAACCA
AAACCCTTCTTACTTCGATGAAGTTTGGAAAGAGTACAGCAAAGGTGACTCCAGATATGT
CGCCAGAGACCCTGCTACTGTTACAGTTGAAGGAATTACAGCTGTCTTGGAAGGCCCTGC
TTCACTCCTTGCTGTCTATGCCATCGCATCGGGCAAGTCCTACAGCCATATCCTCCAGTT
CACTGTCTGTCTTGGTCAGCTCTATGGATGCCTGGTGTACTTTATTACAGCCTACTTGGA
TGGCTTCAACTTCTGGACTAGCCCGTTCTACTTCTGGGCTTATTTCATTGGTGCAAACAG
CTCGTGGGTTGTTATACCAACTATGATCGCCATAAGGAGCTGGAAGAAGATTTGTGCAGC
ATTTCAAGGTGAAAAGGTGAAGACTAAATAGGCAAAGGGTGCACCTTAGTCACAGTTTGG
TTGGAAATTAATAGACATTTGTGCTATGAACAACATCATTGTTCCTGCAATTGAAACCCT
TGTGTTACTGAAAAATTGCATTGTACCCTTGGAGGGAACATCAGTGTTAATTGGATGTGA
CTTTATGCAGCTATTATGTATTGCTGCAAAAGAAATTGGGTTTTGTTTATCCTCTATCAT
TCAAGCTCGCTCTTCTTTACCCTTGAAGAAATAAAAGGGCAGGGAGTTGCCATTTTG