Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0102600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:145603:147847:1 gene:Os01g0102600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Shikimate kinase 4 description:Shikimate kinase domain containing protein. (Os01t0102600-01);Similar to shikimate kinase family protein. (Os01t0102600-02)
Sequence	ATGGCAATGGCAATGGCGGCGATGAGAGGGGCGGCGGCGAGCTTGGGTCCGGGCGCTGTG TCTTGGAACTCGAAGCGCTTCTTCCTCTCCTCCTCCTCCACCACCAGCCGCCCCCATCGT CGTCGTCTACGCGCCTTCCCGAGCTCGGAGCAAACTCTGGAGGAGCTTAACCCTTCCGTT GAGCTGCTCAGGAAAACTGCGGAGGCCGTTGGCGATTTCAGGAAAACACCCATCTACATC GTCGGAACCGACTGTACTGCCAAGCGCAACATTGCAAAGCTCCTTGCCAATTCCATCATA TACCGCTACCTCTGCAGTGAAGAGCTGCTGGAGGATGTTCTTGGAGGCAAAGATGCCCTC AATGCTTTCCGGGAATCCGACCTCAACGGCTACCTCGAAGTCGAGACTGAAGGCCTGAAA CAGCTCACCTCCATGGGCAGCCTCGTGCTTTGCTGTGGGGATGGTGCTGTCATGAACTCA ACCAATCTAGGGCTACTGAGGCATGGAGTCTCCATTTGGATTGATATTCCTCTGGAATTG GTGGTGAATGATATGTTGAAGACACAAGCTACTTCAGACCCTGATTCCTTTTCTGAGGCA ATGAGCAGAGTCCGACAGCGACACGATGAACTAAAAGAGCGCTATGGAGTTTCTGATATA ACTGTTTCAGTACAAAATGTGGCATCTCAACTGGGCTACAGTAGCATCGACTCAGTGACC CTAGAGGACATGGTCCTTGAGATTGTGAGGCAAATAGAGAGGCTGATCCGAGCGAAGTCG ATGATGGAAGCTGCTGGGAAGCCCTTCTAA

Peptide Sequence

PEP ID	Os01t0102600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:145603:147847:1 gene:Os01g0102600 transcript:Os01t0102600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Shikimate kinase 4 description:Shikimate kinase domain containing protein. (Os01t0102600-01);Similar to shikimate kinase family protein. (Os01t0102600-02)
Sequence	MAMAMAAMRGAAASLGPGAVSWNSKRFFLSSSSTTSRPHRRRLRAFPSSEQTLEELNPSV ELLRKTAEAVGDFRKTPIYIVGTDCTAKRNIAKLLANSIIYRYLCSEELLEDVLGGKDAL NAFRESDLNGYLEVETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDIPLEL VVNDMLKTQATSDPDSFSEAMSRVRQRHDELKERYGVSDITVSVQNVASQLGYSSIDSVT LEDMVLEIVRQIERLIRAKSMMEAAGKPF

Transcript Sequence

Transcript ID	Os01t0102600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:145603:147847:1 gene:Os01g0102600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Shikimate kinase 4 description:Shikimate kinase domain containing protein. (Os01t0102600-01);Similar to shikimate kinase family protein. (Os01t0102600-02)
Sequence	AGCGGTGCGGTCGTGCGGATAACGAACGAACGAAGAGAAAGCATGGCAATGGCAATGGCG GCGATGAGAGGGGCGGCGGCGAGCTTGGGTCCGGGCGCTGTGTCTTGGAACTCGAAGCGC TTCTTCCTCTCCTCCTCCTCCACCACCAGCCGCCCCCATCGTCGTCGTCTACGCGCCTTC CCGAGCTCGGAGCAAACTCTGGAGGAGCTTAACCCTTCCGTTGAGCTGCTCAGGAAAACT GCGGAGGCCGTTGGCGATTTCAGGAAAACACCCATCTACATCGTCGGAACCGACTGTACT GCCAAGCGCAACATTGCAAAGCTCCTTGCCAATTCCATCATATACCGCTACCTCTGCAGT GAAGAGCTGCTGGAGGATGTTCTTGGAGGCAAAGATGCCCTCAATGCTTTCCGGGAATCC GACCTCAACGGCTACCTCGAAGTCGAGACTGAAGGCCTGAAACAGCTCACCTCCATGGGC AGCCTCGTGCTTTGCTGTGGGGATGGTGCTGTCATGAACTCAACCAATCTAGGGCTACTG AGGCATGGAGTCTCCATTTGGATTGATATTCCTCTGGAATTGGTGGTGAATGATATGTTG AAGACACAAGCTACTTCAGACCCTGATTCCTTTTCTGAGGCAATGAGCAGAGTCCGACAG CGACACGATGAACTAAAAGAGCGCTATGGAGTTTCTGATATAACTGTTTCAGTACAAAAT GTGGCATCTCAACTGGGCTACAGTAGCATCGACTCAGTGACCCTAGAGGACATGGTCCTT GAGATTGTGAGGCAAATAGAGAGGCTGATCCGAGCGAAGTCGATGATGGAAGCTGCTGGG AAGCCCTTCTAAAAGAAGGAAGGATCCATTGATGTATAGACTGTTGGTCATGTATGTACC TCCTGATCCCTGAGGAATTGCCTTAGATGTTCCAGGACCAGGAAGCAAAAAGTGCCGCCA CAGCTACTGATTGATTAATTTTGTACCGAATGATCAATCATTCGATTGATATTTTTACAT TCCCTTGTGACTTGTGAGGGAGACATATGTAGCAGAATGAAAAAGAAGTCGAATTTATTT TCAAAAAAAGAAGCTGTGAGTGTGGCTAGAATCTACACTTGTTC