Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0101600-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:72823:77699:1 gene:Os01g0101600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Immunoglobulin-like fold domain containing protein. (Os01t0101600-01);Immunoglobulin-like fold domain containing protein. (Os01t0101600-02);Hypothetical conserved gene. (Os01t0101600-03)
Sequence	ATGGCGGCTCCCAAGCCCATCTGGGTGCGCCAGGCCGAGGAGGCCAAGCTCAAGTCCGAG GCCGAGACCGCCGCCGCCGCCAAGGCCGCCTTCGACGCCACCTTCAAGGCCCTCTCCGCA TCCGCCGCCGACGACCCCGACCAGGACGACGACCTCCACCGCCCCTCTTCCCCGGCCCAA GCCTCTCGGGACGCCTACTCCGACGCAGACGACGACGACGACGACCGCCCCCATGCCCCT CCCGGTCCAGTCGACCCCTCCAAGTCCTCCGCCGCCGGCCCCGGCATCGCTGGTGGTTCC GCTGGTGCCCCCGCCACCTTCACCGTCGTCTCCAAGGACCGGGACTCGCGCAGGGTCCCA ACCGGCGGCGCGCGCGTCCGCGTCCGCGTCTCCCCGGCAGCTGGCGTCGGCGGCGACGAC CTCGAAGGTGCAGTCAAGGACAACGGCGATGGCTCCTACGCCGTCACCTACGTCGTCCCT AAGCGCGGTAACTACATGGTCCACGTCGACCTCGACGGGTCGCCCGTCATGGGGAGCCCC TTCCCCGTCTTCTTCAGCGCATCCAACACTGCCGCCACCGTCGTCACCTCCACCTTCCCG CCCACGCTTCCGGCTGTCTCCTCCGCCTACCCCAACATGGTCAACCAGACCATGCCCAAC ATGCCAAACTACGCTGGCGCCCTCTCGGCTGCCTTCCCCAGCCTTCTCGGCCTCCTCCCT GCTGCGTCTACTGGTGCCTCTGGTGGGGTTGTGCTGCCTGGTGTTGGTGCCTCGCTTGGG GAGATTTGCCGGGAGCACATCAACGGCAAGTGCACCAAGGCCACAGACTGTAGCAAGCTC AACCACCCGCCACAGCAGCTGCTCATGTCCGTGCTGGCTGCCACTACATCTGTCGGTGCG CTCAGCCAGGCGCCCATGGCACCATCTGCTGCTGCCATGGCTGCTGCTCAGGCCATCATG GCTGCACAGGCACTGCAGGCACATGCTGCGCAGATGCAGGCTGATTCCAAGGCTGCAGGA GGGGAGGCTTCAGGTTCAACAGATAAAACTGATAAAGGTGATGTTCTGAAGAAAATGGTT CAGATTAGCAACCTAAGCCCACTTCTTACGGTGGATCATATTAAGCAGCTATTTGGATAC TGTGGCAAAGTGGTTGATTGCACCATCACAGACTCAAAACATATTGCCTATGTAGAATAC TCCAAACAAGAAGAAGCAACTGCAGCGCTGGCACTCAACAACATGGATGTTGGTGGTCGC CCCTTGAATGTTGAGATGGCCAAATCCCTCCCTCCCAAAACTAATTTGGCAAATAGCAAT CTGCCCATGATGATGCAGCAAGCTGTTCAGTTGCAACAGATGCAATTCCAGCAGGCTCTG ATAATGCAGCAGACAATAGCAGCTCAACAGGCTGCTGCGCGCGCAGCCACCATGAAATCC GCCACTGAAGCAGCAGCTGCAAGGGCTGCTGAGATAAGCAGGAAGTTGAAAGCGGAGGGC TTTGGTGGGGAAACTGTCGAAGAGAAGGATGCCAGAGGGAAGTCAAGGTCGCCATCACCT TCTGCCCGTAGATCGAAATCTCGGTCAAGATCACCTATCAAGTACCGCCGGAGCAGGCGG TCTAGATCATACTCTCCGCCGGTTAGACACACACGAGGGCGTAGATCACGATCACCATCA AGATCTTACCACTCAAAGTATGGTAGTGATCGATCTTATCGGGATGATAGAGACAAGTAT GGCAGGTCTGGGAGAAGAGAGAGCGACCGATCTCGTGACCACTATTCATCTAGCTCAAGA AGAAACAGAAGTAGAAGTATAAGTCCAAGGCATAAGAAGTCCTCCAGATCTGATTCTCGG TCACCCAAGCGACACAGAGAAGAAAGTTTAAGCCCTTCGAAATCACGGAGGTCAGCTCGA GCTGGTTCAAGGTCACCAGGACAGCACAAAGGAAGCAAATTGTCGCCAACTCGTGACCAT CATTCTTCTCGCCGTAGTAGGCGTTCTAGATCCAGATCTCAAGAGAAGAATCGCAACAGT GATAAAAAGGACAGCAAAAAATCTGAGATGGAGGATAAAAAAAGGAGATCTGATAGAGGC AATAGAGGTGACAAAGATGAAAAGTATCTAAAGGATCCAATGGAAGATAAGAAACTAGAT GTGTCTTCTGTTGCTCATAAAAGGAGTTCATCCGCATCAGAAGATGAAATGCTGAATAGT AATTCCAAGAGATCTAAACATGATGCTGCTTTGGAGTGTCATGAGAGGAAGGATGAGGAT CATATTGAGGAGGACAGAAGGGATTTGGATTCTGTGGGATCAAAATCTGAGAAGAGAAGC CTAGGAAATGGTGATCATGAAAAACAAAATCATGATACAAATAGGAAAACAGACAAGAGT CATGACAGGGATGATTCTTCTCGTAAGGACAGAAAATACAGAGAGGATGAATCAAGACAT TCTAGAGATAGATGTTCCCGTCATTCATCTTCAAGATCCCATAGAAGTTCAAGGCATTCA AGGGAAAAGTATCATGGAGATACCACTGATCAGCATAAATCAAAGAAATCAGAAGAGGGT TCCAAGTCTAGGAAGGATGATTGTCTCCTTGATGATACCTTGTCTTCAGATAGAAGGAAA GTTCAGAGCGAGGACTCTCCTCGTAGGAAGCATAACCAGTTAGCAGCTAGTTCAGATGTT CATGGCATCAACCATGATACTGGAGTTAAGGTGCCAAATGATTTCTCAGAAGCTGATCAG GGTATCCAGGAAGCCAAGCAGGTCGTTCATGAAACTGATATGTCCTCTGCACCACGCCTT GAGGACCCATTTCTTGCACAAGACAAACAAGATAAACCTATTGTTGCTGGCCTTAATGGG CTACATGAACCTGGAGTTGATGGTGCATTTGTGGGCACTGAAGAGTCTGCTATATGA

Peptide Sequence

PEP ID	Os01t0101600-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:72823:77699:1 gene:Os01g0101600 transcript:Os01t0101600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Immunoglobulin-like fold domain containing protein. (Os01t0101600-01);Immunoglobulin-like fold domain containing protein. (Os01t0101600-02);Hypothetical conserved gene. (Os01t0101600-03)
Sequence	MAAPKPIWVRQAEEAKLKSEAETAAAAKAAFDATFKALSASAADDPDQDDDLHRPSSPAQ ASRDAYSDADDDDDDRPHAPPGPVDPSKSSAAGPGIAGGSAGAPATFTVVSKDRDSRRVP TGGARVRVRVSPAAGVGGDDLEGAVKDNGDGSYAVTYVVPKRGNYMVHVDLDGSPVMGSP FPVFFSASNTAATVVTSTFPPTLPAVSSAYPNMVNQTMPNMPNYAGALSAAFPSLLGLLP AASTGASGGVVLPGVGASLGEICREHINGKCTKATDCSKLNHPPQQLLMSVLAATTSVGA LSQAPMAPSAAAMAAAQAIMAAQALQAHAAQMQADSKAAGGEASGSTDKTDKGDVLKKMV QISNLSPLLTVDHIKQLFGYCGKVVDCTITDSKHIAYVEYSKQEEATAALALNNMDVGGR PLNVEMAKSLPPKTNLANSNLPMMMQQAVQLQQMQFQQALIMQQTIAAQQAAARAATMKS ATEAAAARAAEISRKLKAEGFGGETVEEKDARGKSRSPSPSARRSKSRSRSPIKYRRSRR SRSYSPPVRHTRGRRSRSPSRSYHSKYGSDRSYRDDRDKYGRSGRRESDRSRDHYSSSSR RNRSRSISPRHKKSSRSDSRSPKRHREESLSPSKSRRSARAGSRSPGQHKGSKLSPTRDH HSSRRSRRSRSRSQEKNRNSDKKDSKKSEMEDKKRRSDRGNRGDKDEKYLKDPMEDKKLD VSSVAHKRSSSASEDEMLNSNSKRSKHDAALECHERKDEDHIEEDRRDLDSVGSKSEKRS LGNGDHEKQNHDTNRKTDKSHDRDDSSRKDRKYREDESRHSRDRCSRHSSSRSHRSSRHS REKYHGDTTDQHKSKKSEEGSKSRKDDCLLDDTLSSDRRKVQSEDSPRRKHNQLAASSDV HGINHDTGVKVPNDFSEADQGIQEAKQVVHETDMSSAPRLEDPFLAQDKQDKPIVAGLNG LHEPGVDGAFVGTEESAI

Transcript Sequence

Transcript ID	Os01t0101600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:72823:77699:1 gene:Os01g0101600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Immunoglobulin-like fold domain containing protein. (Os01t0101600-01);Immunoglobulin-like fold domain containing protein. (Os01t0101600-02);Hypothetical conserved gene. (Os01t0101600-03)
Sequence	AATCGAATCGAATCGAATCCTCCTCCTCCAGGCTCCAAGCCGAAACCAAACCCTAGCCCC GTCGATCTCCCTCTCCTCGCATGGCGGCTCCCAAGCCCATCTGGGTGCGCCAGGCCGAGG AGGCCAAGCTCAAGTCCGAGGCCGAGACCGCCGCCGCCGCCAAGGCCGCCTTCGACGCCA CCTTCAAGGCCCTCTCCGCATCCGCCGCCGACGACCCCGACCAGGACGACGACCTCCACC GCCCCTCTTCCCCGGCCCAAGCCTCTCGGGACGCCTACTCCGACGCAGACGACGACGACG ACGACCGCCCCCATGCCCCTCCCGGTCCAGTCGACCCCTCCAAGTCCTCCGCCGCCGGCC CCGGCATCGCTGGTGGTTCCGCTGGTGCCCCCGCCACCTTCACCGTCGTCTCCAAGGACC GGGACTCGCGCAGGGTCCCAACCGGCGGCGCGCGCGTCCGCGTCCGCGTCTCCCCGGCAG CTGGCGTCGGCGGCGACGACCTCGAAGGTGCAGTCAAGGACAACGGCGATGGCTCCTACG CCGTCACCTACGTCGTCCCTAAGCGCGGTAACTACATGGTCCACGTCGACCTCGACGGGT CGCCCGTCATGGGGAGCCCCTTCCCCGTCTTCTTCAGCGCATCCAACACTGCCGCCACCG TCGTCACCTCCACCTTCCCGCCCACGCTTCCGGCTGTCTCCTCCGCCTACCCCAACATGG TCAACCAGACCATGCCCAACATGCCAAACTACGCTGGCGCCCTCTCGGCTGCCTTCCCCA GCCTTCTCGGCCTCCTCCCTGCTGCGTCTACTGGTGCCTCTGGTGGGGTTGTGCTGCCTG GTGTTGGTGCCTCGCTTGGGGAGATTTGCCGGGAGCACATCAACGGCAAGTGCACCAAGG CCACAGACTGTAGCAAGCTCAACCACCCGCCACAGCAGCTGCTCATGTCCGTGCTGGCTG CCACTACATCTGTCGGTGCGCTCAGCCAGGCGCCCATGGCACCATCTGCTGCTGCCATGG CTGCTGCTCAGGCCATCATGGCTGCACAGGCACTGCAGGCACATGCTGCGCAGATGCAGG CTGATTCCAAGGCTGCAGGAGGGGAGGCTTCAGGTTCAACAGATAAAACTGATAAAGGTG ATGTTCTGAAGAAAATGGTTCAGATTAGCAACCTAAGCCCACTTCTTACGGTGGATCATA TTAAGCAGCTATTTGGATACTGTGGCAAAGTGGTTGATTGCACCATCACAGACTCAAAAC ATATTGCCTATGTAGAATACTCCAAACAAGAAGAAGCAACTGCAGCGCTGGCACTCAACA ACATGGATGTTGGTGGTCGCCCCTTGAATGTTGAGATGGCCAAATCCCTCCCTCCCAAAA CTAATTTGGCAAATAGCAATCTGCCCATGATGATGCAGCAAGCTGTTCAGTTGCAACAGA TGCAATTCCAGCAGGCTCTGATAATGCAGCAGACAATAGCAGCTCAACAGGCTGCTGCGC GCGCAGCCACCATGAAATCCGCCACTGAAGCAGCAGCTGCAAGGGCTGCTGAGATAAGCA GGAAGTTGAAAGCGGAGGGCTTTGGTGGGGAAACTGTCGAAGAGAAGGATGCCAGAGGGA AGTCAAGGTCGCCATCACCTTCTGCCCGTAGATCGAAATCTCGGTCAAGATCACCTATCA AGTACCGCCGGAGCAGGCGGTCTAGATCATACTCTCCGCCGGTTAGACACACACGAGGGC GTAGATCACGATCACCATCAAGATCTTACCACTCAAAGTATGGTAGTGATCGATCTTATC GGGATGATAGAGACAAGTATGGCAGGTCTGGGAGAAGAGAGAGCGACCGATCTCGTGACC ACTATTCATCTAGCTCAAGAAGAAACAGAAGTAGAAGTATAAGTCCAAGGCATAAGAAGT CCTCCAGATCTGATTCTCGGTCACCCAAGCGACACAGAGAAGAAAGTTTAAGCCCTTCGA AATCACGGAGGTCAGCTCGAGCTGGTTCAAGGTCACCAGGACAGCACAAAGGAAGCAAAT TGTCGCCAACTCGTGACCATCATTCTTCTCGCCGTAGTAGGCGTTCTAGATCCAGATCTC AAGAGAAGAATCGCAACAGTGATAAAAAGGACAGCAAAAAATCTGAGATGGAGGATAAAA AAAGGAGATCTGATAGAGGCAATAGAGGTGACAAAGATGAAAAGTATCTAAAGGATCCAA TGGAAGATAAGAAACTAGATGTGTCTTCTGTTGCTCATAAAAGGAGTTCATCCGCATCAG AAGATGAAATGCTGAATAGTAATTCCAAGAGATCTAAACATGATGCTGCTTTGGAGTGTC ATGAGAGGAAGGATGAGGATCATATTGAGGAGGACAGAAGGGATTTGGATTCTGTGGGAT CAAAATCTGAGAAGAGAAGCCTAGGAAATGGTGATCATGAAAAACAAAATCATGATACAA ATAGGAAAACAGACAAGAGTCATGACAGGGATGATTCTTCTCGTAAGGACAGAAAATACA GAGAGGATGAATCAAGACATTCTAGAGATAGATGTTCCCGTCATTCATCTTCAAGATCCC ATAGAAGTTCAAGGCATTCAAGGGAAAAGTATCATGGAGATACCACTGATCAGCATAAAT CAAAGAAATCAGAAGAGGGTTCCAAGTCTAGGAAGGATGATTGTCTCCTTGATGATACCT TGTCTTCAGATAGAAGGAAAGTTCAGAGCGAGGACTCTCCTCGTAGGAAGCATAACCAGT TAGCAGCTAGTTCAGATGTTCATGGCATCAACCATGATACTGGAGTTAAGGTGCCAAATG ATTTCTCAGAAGCTGATCAGGGTATCCAGGAAGCCAAGCAGGTCGTTCATGAAACTGATA TGTCCTCTGCACCACGCCTTGAGGACCCATTTCTTGCACAAGACAAACAAGATAAACCTA TTGTTGCTGGCCTTAATGGGCTACATGAACCTGGAGTTGATGGTGCATTTGTGGGCACTG AAGAGTCTGCTATATGATATTAACCAGAGTGTTTACTTGATGGTTGCTATATCATTGAGT TGGCTGATCACAGGATCTACTTGATCAGTGGATGCAGATAGATGAATTGGTGTTTGTTAT CTTCCTTTCTGATTTAGGAGTTTTATTTGCAGGATATGAAGAACATGGAGAACTTGAGTG CTGATCGAAGTGTTCATCTGATCTATAAAAATGTACTCATTAACTCTTCAGATGGAGATT TTTTCTGTGGAGTAAACTTCTAGATGTAACGCTGGAGCTTGTGAGGTGATTTAGTACTGT GAGGTCAAACCAACCATATATTTGTCGTTGCAGGCTTGTGGTTCCATGAAGAGTTGGAGC TCATTCTGGGGTGTCAATTGAAGATACAAGGGAGGTCACACTTTTCCGTACTCAAGTAAA GTCCATTATACAAGGCTATATAAACCACTTCTCTTGTAGGCTGTGATACATTTCAATTGG CATGCTTTGGCTAGTGCAATGATCCAAAGATGTTTCTACATGTAAACATCCTTTGATTAA GTTGACATGCTCCCTGTATTTGTTATGCGTATGATTTGCATTATGTCTGCATCAGTAATG GTTGAAAAGATCTATAGCTTAATACGTATTTAAATCTTAGAACACGTAACCAGTCCATTT TACTTTGTATTTTGATTAATGCAGAGACTTGCCCTGTGGTTCTTGTTT