Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0100100-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:2983:10815:1 gene:Os01g0100100 gene_biotype:protein_coding transcript_biotype:protein_coding description:RabGAP/TBC domain containing protein. (Os01t0100100-01)
Sequence	ATGTCGTCGGCCGCGGGCCAAGACAACGGAGATACCGCTGGGGACTACATCAAGTGGATG TGCGGCGCCGGTGGCCGTGCGGGCGGCGCCATGGCCAACCTCCAGCGCGGCGTTGGCTCC CTCGTCCGTGACATTGGCGACCCCTGCCTCAACCCATCCCCCGTTAAGGGGAGCAAAATG CTCAAACCGGAAAAATGGCACACATGTTTTGATAATGATGGAAAGGTCATAGGTTTCCGT AAAGCCCTAAAATTCATTGTCTTAGGGGGTGTGGATCCCACTATTCGAGCTGAAGTTTGG GAATTTCTTCTTGGCTGCTATGCCTTGAGTAGTACCTCAGAGTATAGGAGGAAACTAAGA GCTGTTAGAAGGGAAAAATATCAAATTTTAGTTAGACAGTGCCAGAGCATGCACCCAAGC ATTGGTACAGGTGAGCTTGCTTACGCTGTTGGATCAAAGCTAATGGATGTCAGGACTATG TCAAAAGAAACCCACATTGCAGAAGAAGTTAGCACAAGTCAACAAACTTCACAAAATACA GCTGGCAGTTTAGTAGAAGATTCAGATTATGGCCCCGGTGGTGCACAGCAGTCACAAAAA AGGGAAAGCTGTAGTAAATCAGCTGAACTAGTTGGTTTCAACGTACATAATGATACCTCT CTTTATGATTCTTCCAATTTTATTGTGTCTTCTACAGAAGTGAATAATTGCTCAAAAGAT TCTCAGGATTACAATGACATGGGTGAACCAAGATATGACACTGAGACCTTCGATGATTAT CCTTCTCTACCTGTTACAAATTTTTTCTCAACTGATGGTGTGGGCAGCAATGGAGTTGAT AAAAATCATTGTAGTTTCTCAGTTCCTGAAGATAGATTAAGGCACCGTGATGAACGTATG CACAGCTTCCAAATCAATAATAACATAGATCTCATTATAGAGTCAAATTCATGCTCCAGT GATGTGTTTAGGGCTAGCAACAGTGATTCAGCCATCTTTCACTCAGATGCATACAAGCAG GATAGATGGTTAGATGATAATGGCTATAACAGGGAAGTTATAGATTCCTTGAGGATATCT GATGCACCAGAAGCAGATTTTGTTGATGGAACCAAATCCAACAGTGTGGTTGCCAGCAAA GATCGAGTCTCTGAATGGCTTTGGACACTGCACCGAATTGTGGTTGATGTGGTTAGAACG GATAGTCATCTTGATTTCTATGGAGAATCAAGAAATATGGCTAGGATGTCAGATATACTT GCAGTTTATGCATGGGTTGATCCTTCCACCGGGTATTGCCAAGGTATGAGTGATCTACTT TCACCTTTTGTTGTTCTCTATGAGGATGATGCAGATGCCTTTTGGTGCTTTGAGATGCTA CTGAGAAGGATGCGTGAAAATTTCCAGATGGAGGGACCAACAGGAGTTATGAAGCAGTTG CAAGCATTGTGGAAGATCATGGAAATAACTGATGTAGAATTATTTGAACATTTGTCAACA ATTGGTGCTGAAAGCCTTCATTTTGCTTTCCGGATGCTGCTAGTGCTTTTTCGTCGAGAG CTGTCCTTTGAGGAGTCACTTAGCATGTGGGAGATGATGTGGGCTGCTGACTTTAATGAA GATGTGATTTTACATTTGGAAGAGAATTGTCTGGAGCCATTGCTGGTAGATATGAGGAAT GATTTATCATGTGAGGTGAAAGAAGAGCACCGGGTGAACAGTTACACAAGAAGAAAGTCC AAAAGCAGGAAGCCCCATCATAGAAATGGTGAAATGCGTGTAGCTTGCAACCTTGGAATG AAACCCAATACAAGAAATCCCCTCTGTGGCTTGTCAGGAGCTACTATTTGGGCAAGACAT CAGCAGATGCCACATATAAGCACAAATGTGTTAGCAAAGAATGGAGATGATGATCTGCCT ATATTCTGCGTAGCAGCAATCCTTGTAATCAATCGCCACAAGATAATTAGAGAAACTCGC TCAATAGATGATGCAATCAAGATGTTCAATGATAATATGCTGAAGATCAATGTAAAAAGA TGCGTACGCATGGCTATCAAGCTGAGGAAGAAGTATATTTACAAGTTATTGAAGGGGGGC TCGGAATGA

Peptide Sequence

PEP ID	Os01t0100100-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:2983:10815:1 gene:Os01g0100100 transcript:Os01t0100100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RabGAP/TBC domain containing protein. (Os01t0100100-01)
Sequence	MSSAAGQDNGDTAGDYIKWMCGAGGRAGGAMANLQRGVGSLVRDIGDPCLNPSPVKGSKM LKPEKWHTCFDNDGKVIGFRKALKFIVLGGVDPTIRAEVWEFLLGCYALSSTSEYRRKLR AVRREKYQILVRQCQSMHPSIGTGELAYAVGSKLMDVRTMSKETHIAEEVSTSQQTSQNT AGSLVEDSDYGPGGAQQSQKRESCSKSAELVGFNVHNDTSLYDSSNFIVSSTEVNNCSKD SQDYNDMGEPRYDTETFDDYPSLPVTNFFSTDGVGSNGVDKNHCSFSVPEDRLRHRDERM HSFQINNNIDLIIESNSCSSDVFRASNSDSAIFHSDAYKQDRWLDDNGYNREVIDSLRIS DAPEADFVDGTKSNSVVASKDRVSEWLWTLHRIVVDVVRTDSHLDFYGESRNMARMSDIL AVYAWVDPSTGYCQGMSDLLSPFVVLYEDDADAFWCFEMLLRRMRENFQMEGPTGVMKQL QALWKIMEITDVELFEHLSTIGAESLHFAFRMLLVLFRRELSFEESLSMWEMMWAADFNE DVILHLEENCLEPLLVDMRNDLSCEVKEEHRVNSYTRRKSKSRKPHHRNGEMRVACNLGM KPNTRNPLCGLSGATIWARHQQMPHISTNVLAKNGDDDLPIFCVAAILVINRHKIIRETR SIDDAIKMFNDNMLKINVKRCVRMAIKLRKKYIYKLLKGGSE

Transcript Sequence

Transcript ID	Os01t0100100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:2983:10815:1 gene:Os01g0100100 gene_biotype:protein_coding transcript_biotype:protein_coding description:RabGAP/TBC domain containing protein. (Os01t0100100-01)
Sequence	GTTGGTAATGAAGAAGACGAGACGACGACTTCCCCACTAGGAAACACGACGGAGGCGGAG ATGATCGACGGCGGAGAGAGCTACAGAAACATCGATGCCTCCTGTCCAATCCCCCCATCC CATTCGGTAGTTGGATTGAAGACTACCGAATAAGAGAAGCAGGCAGGCAGACAAACCCTT GAACCAAGGAGTCCTCGCTGAGGAAGCTTTGGATCCACGACGCAGCTATGGCCTCCCCGC CCACCAGGCCGCCAGCCACAACCAGCTGACTAGGTAGGCTTCCTAGGTCGCATGCATCAT CAGATTTCAATCTCCCTTCGTTCCCTGTCCCTAATCCAATACCAATAGGGAGCAATCAGC TGCTCCTCGACGGCGAGGGAGATGTCGTCGGCCGCGGGCCAAGACAACGGAGATACCGCT GGGGACTACATCAAGTGGATGTGCGGCGCCGGTGGCCGTGCGGGCGGCGCCATGGCCAAC CTCCAGCGCGGCGTTGGCTCCCTCGTCCGTGACATTGGCGACCCCTGCCTCAACCCATCC CCCGTTAAGGGGAGCAAAATGCTCAAACCGGAAAAATGGCACACATGTTTTGATAATGAT GGAAAGGTCATAGGTTTCCGTAAAGCCCTAAAATTCATTGTCTTAGGGGGTGTGGATCCC ACTATTCGAGCTGAAGTTTGGGAATTTCTTCTTGGCTGCTATGCCTTGAGTAGTACCTCA GAGTATAGGAGGAAACTAAGAGCTGTTAGAAGGGAAAAATATCAAATTTTAGTTAGACAG TGCCAGAGCATGCACCCAAGCATTGGTACAGGTGAGCTTGCTTACGCTGTTGGATCAAAG CTAATGGATGTCAGGACTATGTCAAAAGAAACCCACATTGCAGAAGAAGTTAGCACAAGT CAACAAACTTCACAAAATACAGCTGGCAGTTTAGTAGAAGATTCAGATTATGGCCCCGGT GGTGCACAGCAGTCACAAAAAAGGGAAAGCTGTAGTAAATCAGCTGAACTAGTTGGTTTC AACGTACATAATGATACCTCTCTTTATGATTCTTCCAATTTTATTGTGTCTTCTACAGAA GTGAATAATTGCTCAAAAGATTCTCAGGATTACAATGACATGGGTGAACCAAGATATGAC ACTGAGACCTTCGATGATTATCCTTCTCTACCTGTTACAAATTTTTTCTCAACTGATGGT GTGGGCAGCAATGGAGTTGATAAAAATCATTGTAGTTTCTCAGTTCCTGAAGATAGATTA AGGCACCGTGATGAACGTATGCACAGCTTCCAAATCAATAATAACATAGATCTCATTATA GAGTCAAATTCATGCTCCAGTGATGTGTTTAGGGCTAGCAACAGTGATTCAGCCATCTTT CACTCAGATGCATACAAGCAGGATAGATGGTTAGATGATAATGGCTATAACAGGGAAGTT ATAGATTCCTTGAGGATATCTGATGCACCAGAAGCAGATTTTGTTGATGGAACCAAATCC AACAGTGTGGTTGCCAGCAAAGATCGAGTCTCTGAATGGCTTTGGACACTGCACCGAATT GTGGTTGATGTGGTTAGAACGGATAGTCATCTTGATTTCTATGGAGAATCAAGAAATATG GCTAGGATGTCAGATATACTTGCAGTTTATGCATGGGTTGATCCTTCCACCGGGTATTGC CAAGGTATGAGTGATCTACTTTCACCTTTTGTTGTTCTCTATGAGGATGATGCAGATGCC TTTTGGTGCTTTGAGATGCTACTGAGAAGGATGCGTGAAAATTTCCAGATGGAGGGACCA ACAGGAGTTATGAAGCAGTTGCAAGCATTGTGGAAGATCATGGAAATAACTGATGTAGAA TTATTTGAACATTTGTCAACAATTGGTGCTGAAAGCCTTCATTTTGCTTTCCGGATGCTG CTAGTGCTTTTTCGTCGAGAGCTGTCCTTTGAGGAGTCACTTAGCATGTGGGAGATGATG TGGGCTGCTGACTTTAATGAAGATGTGATTTTACATTTGGAAGAGAATTGTCTGGAGCCA TTGCTGGTAGATATGAGGAATGATTTATCATGTGAGGTGAAAGAAGAGCACCGGGTGAAC AGTTACACAAGAAGAAAGTCCAAAAGCAGGAAGCCCCATCATAGAAATGGTGAAATGCGT GTAGCTTGCAACCTTGGAATGAAACCCAATACAAGAAATCCCCTCTGTGGCTTGTCAGGA GCTACTATTTGGGCAAGACATCAGCAGATGCCACATATAAGCACAAATGTGTTAGCAAAG AATGGAGATGATGATCTGCCTATATTCTGCGTAGCAGCAATCCTTGTAATCAATCGCCAC AAGATAATTAGAGAAACTCGCTCAATAGATGATGCAATCAAGATGTTCAATGATAATATG CTGAAGATCAATGTAAAAAGATGCGTACGCATGGCTATCAAGCTGAGGAAGAAGTATATT TACAAGTTATTGAAGGGGGGCTCGGAATGATGAAAAAGTGGAAACTGAAGTTGAGAAATC GCCCTGGGGAACTAGATGTTTTTCAACCATGAACTTCTCGTAATTATGGGTGATGGAACT TTATATATTCATTAGAAGTCCAAAAAAAATCCGTATACTCACGGGAATCTGTACATATGC ACAGTATACTTGAAAACAAGAGACGAAGCGGTGGAAGGATAATAGAGAAGACCGCCATGT TGGTGTAGCATCGATCGATGTTGTCATTGTTTTTGTGGTGCCAGCCCATCTGCCTTGGCA CTTTCCGTGGTGATTTCTGATAAAAGTGGAGTACTAGTTGTTTTTTCTTTTTGCCAAACA ATTTGCGTCAGCTATTGGTGGAGAGAGAAGGAATGAATGAGGAATGTGTATAAAGCACTA GTGGTAATCACGCAGTCGTTTCAATACAGAACAGTAAAAAATGGAGGAATTCTGC