Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	CAA34008
CDS Infomation	cds chromosome:IRGSP-1.0:Pt:1668:3296:-1 gene:CAA34008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Maturase K [Source:UniProtKB/TrEMBL;Acc:E9KIM5]
Sequence	ATGCAACACCCTGTTCTGACCATATTGTACTATGTATCACCATTTGATAAACCGAGAAAT ATTTCTCTCTCTCTGATTCAAGTAGAAATACAAATGGAAAAATTCGAGGGTTATTCAGAA AAACTTAAATTTCCTAGACAATATTTCGTCTACCCACTACTCTTTCAGGAGTACATTTAT GTGTTTGCCCATGATTATGGATTAAATGGTTCCGAACTTGTCGAAATTATTGGTTCTAAT AACAAGAAATTTAGTTCACTACTTGTGAAACGGTTAATGATTCGAATGTATCAGCAGAAT TTTTGGATTAATTTGGTTAATCATCCTAACCAAGATCGATTATTGGATTACAACAATTTT TTTTATTCTGAGTTTTATTCTCAGATTCTATCTGAGGGGTTTGCGATCGTTGTAGAAATC CCATTCTCGCTACGAGAACAGTCTTGTCCGGAAGAAAAAGAAATACCAAAGTTTCAGAAT TTACGATCTATTCATTCAATATTTCCTTTTTTAGAAGACAAATTTTTGCACTTACATTAT CTAGCACATATAGAAATACCCTATCCTATCCATTTGGATATCTTGCTTCAACTCCTTCAA TACCGGATCCAAGATGTTCCATCCTTGCATTTATTGCGATTCTTTCTCAACTACTACTCG AATTGGAATAGTTTTATTACTTCAATGAAATCCATTTTTATTTTGAAAAAAGAAAATAAA AGACTATTTCGGTTCCTATATAACTCTTATGTATCAGAATATGAATTTTTCTTGTTGTTT CTTCGTAAACAATCTTCTTGCTTGCGATTAACTTCTTCCGGAACCTTTCTGGAACGAATC ATCTTTTCTAGGAAGATGGAACATTTTGGGTTAATGTACCCTGCTTTTTTTCGGAAAACC ATATGGTTCGTTATGGATCCCCTTATGCATTATGTTCGATATCAAGGAAAGGCAATTCTT GCATCAAAAGGAACTCTTCTTTTGAAGAAGAAATGGAAATGTTACCTTGTCCGTTTGTGG CAATATTCTTTCTCTTTTTGGACTCAACCGCAAAGGATCCATCTAAACCAATTAGAAAAC TCTTGCTTCGATTTTCTGGGGTACTTTTCAAGTGTACCAATAAATTCTTTGTTAGTAAGG AATCAAATGCTGGAGAATTCATTTCTAATAGATACTCAAATGAAAAAATTCGATACCAAA GTCCCTGTTACTCCTCTCATTGGATCTTTAGCAAAAGCCCAATTTTGTACTGGATCGGGG CATCCTATTAGTAAACCAATTTGGACCGATTTATCGGATTGGGATATTCTTGATCGGTTT GGTCGGATATGTAGAAATCTTTTTCATTATCACAGTGGATCTTCAAAAAAGAAGACTTTG TATCGACTAAAGTATATACTTCGACTTTCATGCGCTAGAACTTTAGCTCGTAAACATAAA AGCACGGTACGAGCTTTTATGCAATGGTTGGGTTCGGTATTTTTAGAAGAATTTTTTACG GAAGAAGAGCAAGTTTTTTCTTTGATGTTCGCCAAAACAACTTACTTTTCTTTCCGTGGA TCGCACAGTGAGCGTATTTGGTATTTGGATATTCTCCGTATCAATGATCTGGTGAATCCT CTTAATTAA

Peptide Sequence

PEP ID	CAA34008
PEP Infomation	pep chromosome:IRGSP-1.0:Pt:1668:3296:-1 gene:CAA34008 transcript:CAA34008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Maturase K [Source:UniProtKB/TrEMBL;Acc:E9KIM5]
Sequence	MQHPVLTILYYVSPFDKPRNISLSLIQVEIQMEKFEGYSEKLKFPRQYFVYPLLFQEYIY VFAHDYGLNGSELVEIIGSNNKKFSSLLVKRLMIRMYQQNFWINLVNHPNQDRLLDYNNF FYSEFYSQILSEGFAIVVEIPFSLREQSCPEEKEIPKFQNLRSIHSIFPFLEDKFLHLHY LAHIEIPYPIHLDILLQLLQYRIQDVPSLHLLRFFLNYYSNWNSFITSMKSIFILKKENK RLFRFLYNSYVSEYEFFLLFLRKQSSCLRLTSSGTFLERIIFSRKMEHFGLMYPAFFRKT IWFVMDPLMHYVRYQGKAILASKGTLLLKKKWKCYLVRLWQYSFSFWTQPQRIHLNQLEN SCFDFLGYFSSVPINSLLVRNQMLENSFLIDTQMKKFDTKVPVTPLIGSLAKAQFCTGSG HPISKPIWTDLSDWDILDRFGRICRNLFHYHSGSSKKKTLYRLKYILRLSCARTLARKHK STVRAFMQWLGSVFLEEFFTEEEQVFSLMFAKTTYFSFRGSHSERIWYLDILRINDLVNP LN

Transcript Sequence

Transcript ID	CAA34008
Transcript Infomation	cdna chromosome:IRGSP-1.0:Pt:1668:3296:-1 gene:CAA34008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Maturase K [Source:UniProtKB/TrEMBL;Acc:E9KIM5]
Sequence	ATGCAACACCCTGTTCTGACCATATTGTACTATGTATCACCATTTGATAAACCGAGAAAT ATTTCTCTCTCTCTGATTCAAGTAGAAATACAAATGGAAAAATTCGAGGGTTATTCAGAA AAACTTAAATTTCCTAGACAATATTTCGTCTACCCACTACTCTTTCAGGAGTACATTTAT GTGTTTGCCCATGATTATGGATTAAATGGTTCCGAACTTGTCGAAATTATTGGTTCTAAT AACAAGAAATTTAGTTCACTACTTGTGAAACGGTTAATGATTCGAATGTATCAGCAGAAT TTTTGGATTAATTTGGTTAATCATCCTAACCAAGATCGATTATTGGATTACAACAATTTT TTTTATTCTGAGTTTTATTCTCAGATTCTATCTGAGGGGTTTGCGATCGTTGTAGAAATC CCATTCTCGCTACGAGAACAGTCTTGTCCGGAAGAAAAAGAAATACCAAAGTTTCAGAAT TTACGATCTATTCATTCAATATTTCCTTTTTTAGAAGACAAATTTTTGCACTTACATTAT CTAGCACATATAGAAATACCCTATCCTATCCATTTGGATATCTTGCTTCAACTCCTTCAA TACCGGATCCAAGATGTTCCATCCTTGCATTTATTGCGATTCTTTCTCAACTACTACTCG AATTGGAATAGTTTTATTACTTCAATGAAATCCATTTTTATTTTGAAAAAAGAAAATAAA AGACTATTTCGGTTCCTATATAACTCTTATGTATCAGAATATGAATTTTTCTTGTTGTTT CTTCGTAAACAATCTTCTTGCTTGCGATTAACTTCTTCCGGAACCTTTCTGGAACGAATC ATCTTTTCTAGGAAGATGGAACATTTTGGGTTAATGTACCCTGCTTTTTTTCGGAAAACC ATATGGTTCGTTATGGATCCCCTTATGCATTATGTTCGATATCAAGGAAAGGCAATTCTT GCATCAAAAGGAACTCTTCTTTTGAAGAAGAAATGGAAATGTTACCTTGTCCGTTTGTGG CAATATTCTTTCTCTTTTTGGACTCAACCGCAAAGGATCCATCTAAACCAATTAGAAAAC TCTTGCTTCGATTTTCTGGGGTACTTTTCAAGTGTACCAATAAATTCTTTGTTAGTAAGG AATCAAATGCTGGAGAATTCATTTCTAATAGATACTCAAATGAAAAAATTCGATACCAAA GTCCCTGTTACTCCTCTCATTGGATCTTTAGCAAAAGCCCAATTTTGTACTGGATCGGGG CATCCTATTAGTAAACCAATTTGGACCGATTTATCGGATTGGGATATTCTTGATCGGTTT GGTCGGATATGTAGAAATCTTTTTCATTATCACAGTGGATCTTCAAAAAAGAAGACTTTG TATCGACTAAAGTATATACTTCGACTTTCATGCGCTAGAACTTTAGCTCGTAAACATAAA AGCACGGTACGAGCTTTTATGCAATGGTTGGGTTCGGTATTTTTAGAAGAATTTTTTACG GAAGAAGAGCAAGTTTTTTCTTTGATGTTCGCCAAAACAACTTACTTTTCTTTCCGTGGA TCGCACAGTGAGCGTATTTGGTATTTGGATATTCTCCGTATCAATGATCTGGTGAATCCT CTTAATTAA