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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

CAA33999
CDS Infomation

cds chromosome:IRGSP-1.0:Pt:47992:48471:-1 gene:CAA33999 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ndhJ description:NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [Source:UniProtKB/TrEMBL;Acc:Q7G800]
Sequence

ATGCAGCAGGGTTGGTTATCTAATTGGCTAGTCAAACATGAGGTGGTTCATAGATCTTTG
GGCTTCGATCATCGAGGAATAGAGACTTTGCAAATAAAAGCAGAGGATTGGGATTCCATT
GCTGTCATTTTATATGTATATGGTTACAATTATTTACGTTCCCAATGTGCTTATGACGTT
GCACCCGGTGGATCTTTAGCTAGCGTGTATCATCTTACGAGAATACAGTATGGTATAGAT
AACCCAGAAGAAGTATGCATAAAAGTCTTTGCCCAAAAGGATAATCCTAGAATCCCATCT
GTCTTCTGGATTTGGAGAAGTTCCGATTTTCAAGAACGCGAATCTTTTGATATGGTGGGA
ATCTCTTATGATAATCATCCACGCCTTAAACGTATCCTAATGCCTGAAAGTTGGATAGGC
TGGCCCTTACGTAAGGACTATATAACCCCCAATTTCTATGAAATACAAGATGCTCATTGA

Peptide Sequence

PEP ID

CAA33999
PEP Infomation

pep chromosome:IRGSP-1.0:Pt:47992:48471:-1 gene:CAA33999 transcript:CAA33999 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ndhJ description:NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [Source:UniProtKB/TrEMBL;Acc:Q7G800]
Sequence

MQQGWLSNWLVKHEVVHRSLGFDHRGIETLQIKAEDWDSIAVILYVYGYNYLRSQCAYDV
APGGSLASVYHLTRIQYGIDNPEEVCIKVFAQKDNPRIPSVFWIWRSSDFQERESFDMVG
ISYDNHPRLKRILMPESWIGWPLRKDYITPNFYEIQDAH

Transcript Sequence

Transcript ID

CAA33999
Transcript Infomation

cdna chromosome:IRGSP-1.0:Pt:47992:48471:-1 gene:CAA33999 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ndhJ description:NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [Source:UniProtKB/TrEMBL;Acc:Q7G800]
Sequence

ATGCAGCAGGGTTGGTTATCTAATTGGCTAGTCAAACATGAGGTGGTTCATAGATCTTTG
GGCTTCGATCATCGAGGAATAGAGACTTTGCAAATAAAAGCAGAGGATTGGGATTCCATT
GCTGTCATTTTATATGTATATGGTTACAATTATTTACGTTCCCAATGTGCTTATGACGTT
GCACCCGGTGGATCTTTAGCTAGCGTGTATCATCTTACGAGAATACAGTATGGTATAGAT
AACCCAGAAGAAGTATGCATAAAAGTCTTTGCCCAAAAGGATAATCCTAGAATCCCATCT
GTCTTCTGGATTTGGAGAAGTTCCGATTTTCAAGAACGCGAATCTTTTGATATGGTGGGA
ATCTCTTATGATAATCATCCACGCCTTAAACGTATCCTAATGCCTGAAAGTTGGATAGGC
TGGCCCTTACGTAAGGACTATATAACCCCCAATTTCTATGAAATACAAGATGCTCATTGA