Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	CAA33993
CDS Infomation	cds chromosome:IRGSP-1.0:Pt:34210:35733:1 gene:CAA33993 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:atpA description:ATPase alpha subunit
Sequence	ATGGCAACCCTTCGAGTCGACGAAATTCATAAAATTCTCCGCGAACGTATTGAACAATAT AATAGAAAAGTAGGGATTGAGAATATCGGTCGCGTAGTTCAAGTGGGGGATGGGATTGCT CGTATTATAGGTCTTGGTGAAATAATGTCAGGCGAATTAGTCGAATTTGCAGAAGGGACT AGGGGTATTGCTCTGAATTTGGAATCCAAAAATGTTGGGATTGTATTAATGGGCGATGGG TTGATGATACAAGAGGGCAGTTTTGTAAAAGCAACAGGAAGAATTGCTCAGATACCCGTG AGCGAGGCTTACTTGGGTCGTGTTATAAATGCTCTGGCTAAACCTATTGATGGGAGAGGC GAAATTGTAGCTTCGGAATCTCGCTTAATTGAATCTCCTGCTCCGGGTATAATTTCCAGG CGTTCTGTATATGAACCCCTTCAAACGGGGCTTATTGCTATCGATTCGATGATTCCTATT GGGCGCGGTCAGCGAGAGTTAATTATTGGGGACAGACAAACCGGCAAAACAGCAGTAGCT ACAGATACAATTCTCAATCAAAAAGGGCAAGATGTAATATGTGTTTATGTAGCTATCGGT CAAAGAGCATCCTCCGTAGCTCAAGTAGTAACTACTTTCCATGAAGAGGGGGCCATGGAA TACACTATTGTAGTAGCTGAAATGGCGGATTCCCCTGCTACATTACAATACCTCGCTCCT TATACGGGAGCAGCCCTGGCTGAGTATTTTATGTACCGCGAACGGCATACTTTAATAATT TATGATGATCTCTCCAAACAGGCACAAGCTTATCGCCAAATGTCCCTTCTATTAAGAAGA CCCCCCGGCCGCGAAGCTTACCCAGGGGATGTTTTTTATTTGCATTCACGCCTTTTAGAA AGAGCCGCTAAATTAAATTCTCTTTTAGGGGAAGGAAGTATGACTGCTTTACCAATAGTT GAGACTCAATCTGGAGACGTTTCCGCCTATATTCCTACTAATGTAATCTCCATTACAGAT GGACAAATATTCTTATCCGCAGATCTATTCAATGCCGGAATTCGGCCTGCTATTAATGTG GGTATTTCCGTTTCCAGAGTAGGATCCGCGGCTCAAATTAAAGCCATGAAACAAGTAGCT GGCAAATCAAAATTGGAATTAGCTCAATTCGCGGAGTTACAAGCCTTTGCACAATTCGCC TCTGCTCTCGATAAAACAAGTCAGAATCAATTGGCAAGGGGCCGACGATTACGAGAATTG CTTAAACAATCCCAAGCAAATCCTCTTCCAGTGGAAGAGCAGATAGCTACTATTTATATC GGAACAAGAGGATATCTTGATTCCTTAGAAATTGGACAGGTAAAGAAATTTCTGGATGAG TTACGTAAACACCTAAAAGATACTAAACCTCAATTCCAAGAAATTATATCTTCTAGCAAG ACATTCACCGAGGAAGCGGAAATCCTTTTGAAGGAAGCTATTCAGGAACAACTCGAACGG TTTTCCCTTCAGGAACAAACATAA

Peptide Sequence

PEP ID	CAA33993
PEP Infomation	pep chromosome:IRGSP-1.0:Pt:34210:35733:1 gene:CAA33993 transcript:CAA33993 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:atpA description:ATPase alpha subunit
Sequence	MATLRVDEIHKILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMSGELVEFAEGT RGIALNLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRG EIVASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA TDTILNQKGQDVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAP YTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE RAAKLNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV GISVSRVGSAAQIKAMKQVAGKSKLELAQFAELQAFAQFASALDKTSQNQLARGRRLREL LKQSQANPLPVEEQIATIYIGTRGYLDSLEIGQVKKFLDELRKHLKDTKPQFQEIISSSK TFTEEAEILLKEAIQEQLERFSLQEQT

Transcript Sequence

Transcript ID	CAA33993
Transcript Infomation	cdna chromosome:IRGSP-1.0:Pt:34210:35733:1 gene:CAA33993 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:atpA description:ATPase alpha subunit
Sequence	ATGGCAACCCTTCGAGTCGACGAAATTCATAAAATTCTCCGCGAACGTATTGAACAATAT AATAGAAAAGTAGGGATTGAGAATATCGGTCGCGTAGTTCAAGTGGGGGATGGGATTGCT CGTATTATAGGTCTTGGTGAAATAATGTCAGGCGAATTAGTCGAATTTGCAGAAGGGACT AGGGGTATTGCTCTGAATTTGGAATCCAAAAATGTTGGGATTGTATTAATGGGCGATGGG TTGATGATACAAGAGGGCAGTTTTGTAAAAGCAACAGGAAGAATTGCTCAGATACCCGTG AGCGAGGCTTACTTGGGTCGTGTTATAAATGCTCTGGCTAAACCTATTGATGGGAGAGGC GAAATTGTAGCTTCGGAATCTCGCTTAATTGAATCTCCTGCTCCGGGTATAATTTCCAGG CGTTCTGTATATGAACCCCTTCAAACGGGGCTTATTGCTATCGATTCGATGATTCCTATT GGGCGCGGTCAGCGAGAGTTAATTATTGGGGACAGACAAACCGGCAAAACAGCAGTAGCT ACAGATACAATTCTCAATCAAAAAGGGCAAGATGTAATATGTGTTTATGTAGCTATCGGT CAAAGAGCATCCTCCGTAGCTCAAGTAGTAACTACTTTCCATGAAGAGGGGGCCATGGAA TACACTATTGTAGTAGCTGAAATGGCGGATTCCCCTGCTACATTACAATACCTCGCTCCT TATACGGGAGCAGCCCTGGCTGAGTATTTTATGTACCGCGAACGGCATACTTTAATAATT TATGATGATCTCTCCAAACAGGCACAAGCTTATCGCCAAATGTCCCTTCTATTAAGAAGA CCCCCCGGCCGCGAAGCTTACCCAGGGGATGTTTTTTATTTGCATTCACGCCTTTTAGAA AGAGCCGCTAAATTAAATTCTCTTTTAGGGGAAGGAAGTATGACTGCTTTACCAATAGTT GAGACTCAATCTGGAGACGTTTCCGCCTATATTCCTACTAATGTAATCTCCATTACAGAT GGACAAATATTCTTATCCGCAGATCTATTCAATGCCGGAATTCGGCCTGCTATTAATGTG GGTATTTCCGTTTCCAGAGTAGGATCCGCGGCTCAAATTAAAGCCATGAAACAAGTAGCT GGCAAATCAAAATTGGAATTAGCTCAATTCGCGGAGTTACAAGCCTTTGCACAATTCGCC TCTGCTCTCGATAAAACAAGTCAGAATCAATTGGCAAGGGGCCGACGATTACGAGAATTG CTTAAACAATCCCAAGCAAATCCTCTTCCAGTGGAAGAGCAGATAGCTACTATTTATATC GGAACAAGAGGATATCTTGATTCCTTAGAAATTGGACAGGTAAAGAAATTTCTGGATGAG TTACGTAAACACCTAAAAGATACTAAACCTCAATTCCAAGAAATTATATCTTCTAGCAAG ACATTCACCGAGGAAGCGGAAATCCTTTTGAAGGAAGCTATTCAGGAACAACTCGAACGG TTTTCCCTTCAGGAACAAACATAA