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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

CAA33989
CDS Infomation

cds chromosome:IRGSP-1.0:Pt:29540:30250:1 gene:CAA33989 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rps2 description:ribosomal protein S2
Sequence

ATGACAAGAAGATATTGGAACATCAATTTGAAAGAGATGATAGAAGCGGGAGTTCATTTT
GGTCATGGTATTAAGAAATGGAATCCTAAAATGGCCCCTTACATCTCGGCAAAGCGTAAA
GGTACTCATATTACAAATCTCGCTAGAACCACCCGTTTTTTATCAGAAGCTTGTGATTTA
GTTTTTGATGCAGCAAGTCAGGGAAAAAGCTTCTTAATTGTTGGTACCAAAAAAAGAGCA
GCGGATTTAGTAGCATCAGCTGCAATAAGGGCTCGTTGTCATTATGTTAATAAAAAGTGG
TTCAGTGGTATGTTAACGAATTGGTCGATTACTAAAACTAGACTTTCTCAATTTAGAGAC
TTAAGAGCAGAAGAAAAGATGGAAAAATTCCACCATCTCCCAAAAAGAGATGTGGCAATC
TTGAAGAGAAAATTATCTACCTTGCAAAGATATCTCGGCGGGATCAAATATATGACGAGG
TTGCCTGACATTGTGATCGTCCTCGATCAGCAAAAAGAGTATATAGCTCTTCGGGAATGT
GCCATTTTGGGGATTCCTACTATTTCTTTAGCCGATACAAATTGTGACCCAGATCTCGCG
AATATATCGATTCCAGCCAACGATGACACTATGACTTCAATTCGATTGATTCTTAACAAA
TTAGTATTTGCAATTTGTGAGGGCCGTTCTCTCTATATAAGAAATCATTGA

Peptide Sequence

PEP ID

CAA33989
PEP Infomation

pep chromosome:IRGSP-1.0:Pt:29540:30250:1 gene:CAA33989 transcript:CAA33989 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rps2 description:ribosomal protein S2
Sequence

MTRRYWNINLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTTRFLSEACDL
VFDAASQGKSFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRD
LRAEEKMEKFHHLPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALREC
AILGIPTISLADTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEGRSLYIRNH

Transcript Sequence

Transcript ID

CAA33989
Transcript Infomation

cdna chromosome:IRGSP-1.0:Pt:29540:30250:1 gene:CAA33989 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rps2 description:ribosomal protein S2
Sequence

ATGACAAGAAGATATTGGAACATCAATTTGAAAGAGATGATAGAAGCGGGAGTTCATTTT
GGTCATGGTATTAAGAAATGGAATCCTAAAATGGCCCCTTACATCTCGGCAAAGCGTAAA
GGTACTCATATTACAAATCTCGCTAGAACCACCCGTTTTTTATCAGAAGCTTGTGATTTA
GTTTTTGATGCAGCAAGTCAGGGAAAAAGCTTCTTAATTGTTGGTACCAAAAAAAGAGCA
GCGGATTTAGTAGCATCAGCTGCAATAAGGGCTCGTTGTCATTATGTTAATAAAAAGTGG
TTCAGTGGTATGTTAACGAATTGGTCGATTACTAAAACTAGACTTTCTCAATTTAGAGAC
TTAAGAGCAGAAGAAAAGATGGAAAAATTCCACCATCTCCCAAAAAGAGATGTGGCAATC
TTGAAGAGAAAATTATCTACCTTGCAAAGATATCTCGGCGGGATCAAATATATGACGAGG
TTGCCTGACATTGTGATCGTCCTCGATCAGCAAAAAGAGTATATAGCTCTTCGGGAATGT
GCCATTTTGGGGATTCCTACTATTTCTTTAGCCGATACAAATTGTGACCCAGATCTCGCG
AATATATCGATTCCAGCCAACGATGACACTATGACTTCAATTCGATTGATTCTTAACAAA
TTAGTATTTGCAATTTGTGAGGGCCGTTCTCTCTATATAAGAAATCATTGA