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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

CAA33978
CDS Infomation

cds chromosome:IRGSP-1.0:Pt:72883:74110:1 gene:CAA33978 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:petD description:cytochrome b/f
Sequence

ATGGGAGTAACAAAGAAACCTGACTTAAACGATCCTGTATTAAGAGCAAAATTAGCTAAA
GGGATGGGACATAATTATTACGGGGAACCCGCGTGGCCCAACGATCTTTTATATATTTTT
CCAGTAGTAATTCTAGGTACTATTGCATGTAATGTAGGTTTAGCGGTTCTCGAGCCGTCA
ATGATTGGTGAACCGGCGGATCCGTTTGCAACTCCTCTGGAAATATTACCCGAGTGGTAC
TTCTTTCCCGTGTTTCAAATACTCCGTACAGTACCTAATAAGTTATTGGGCGTTCTCTTA
ATGGTTTCTGTGCCGACGGGCTTATTGACAGTACCTTTTCTAGAGAATGTCAATAAATTC
CAAAATCCATTTCGTCGCCCAGTAGCTACAACCGTTTTTTTAATCGGTACTGCAGTAGCT
CTTTGGTTAGGTATTGGAGCAACATTACCCATTGAAAAATCCTTAACTTTAGGTCTTTTT
TAG

Peptide Sequence

PEP ID

CAA33978
PEP Infomation

pep chromosome:IRGSP-1.0:Pt:72883:74110:1 gene:CAA33978 transcript:CAA33978 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:petD description:cytochrome b/f
Sequence

MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS
MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPTGLLTVPFLENVNKF
QNPFRRPVATTVFLIGTAVALWLGIGATLPIEKSLTLGLF

Transcript Sequence

Transcript ID

CAA33978
Transcript Infomation

cdna chromosome:IRGSP-1.0:Pt:72883:74110:1 gene:CAA33978 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:petD description:cytochrome b/f
Sequence

ATGGGAGTAACAAAGAAACCTGACTTAAACGATCCTGTATTAAGAGCAAAATTAGCTAAA
GGGATGGGACATAATTATTACGGGGAACCCGCGTGGCCCAACGATCTTTTATATATTTTT
CCAGTAGTAATTCTAGGTACTATTGCATGTAATGTAGGTTTAGCGGTTCTCGAGCCGTCA
ATGATTGGTGAACCGGCGGATCCGTTTGCAACTCCTCTGGAAATATTACCCGAGTGGTAC
TTCTTTCCCGTGTTTCAAATACTCCGTACAGTACCTAATAAGTTATTGGGCGTTCTCTTA
ATGGTTTCTGTGCCGACGGGCTTATTGACAGTACCTTTTCTAGAGAATGTCAATAAATTC
CAAAATCCATTTCGTCGCCCAGTAGCTACAACCGTTTTTTTAATCGGTACTGCAGTAGCT
CTTTGGTTAGGTATTGGAGCAACATTACCCATTGAAAAATCCTTAACTTTAGGTCTTTTT
TAG