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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

CAA33972
CDS Infomation

cds chromosome:IRGSP-1.0:Pt:67638:68288:-1 gene:CAA33972 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCCATTGGTGTTCCAAAAGTACCTTACCGGATTCCCGGAGATGAAGAAGCGACTTGG
GTTGACTTATACAATGTTATGTATCGAGAAAGGACACTTTTTTTAGGTCAAGAGATTCGT
TGCGAGGTCACGAATCATATTACAGGTCTCATGGTATATCTCAGTATAGAAGATGGAAGT
AGCGATATTTTTTTGTTTATAAACTCCCCCGGCGGTTGGTTAATCTCAGGAATGGCGATT
TTTGATACGATGCAAACGGTAACACCAAATATATATACAACATGCCTAGGAATAGCCGCG
TCCATGCCGTCCTTCATTCTGCTTGGAGGAGAACCCACCAAGCGTATAGCATTCCCCCAC
GCGAGGATTATGCTTCACCAACCTGCTAGTGCTTATTATCGGGCAAGAACACCAGAATTT
TTACTAGAAGTGGAAGAGTTACACAAAGTTCGCGAAATGATCACAAGGGTTTATGCACTA
AGAACAGGCAAGCCTTTTTGGGTTGTATCCGAAGACATGGAAAGGGATGTTTTTATGTCA
GCAGACGAAGCCAAAGCTTATGGACTTGTCGATATTGTAGGGGATGAAATGCTTGACGAG
CACTGCGATACTGATCCAGTGTGGTTTCCAGAAATGTTTAAGGATTGGTAG

Peptide Sequence

PEP ID

CAA33972
PEP Infomation

pep chromosome:IRGSP-1.0:Pt:67638:68288:-1 gene:CAA33972 transcript:CAA33972 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGS
SDIFLFINSPGGWLISGMAIFDTMQTVTPNIYTTCLGIAASMPSFILLGGEPTKRIAFPH
ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS
ADEAKAYGLVDIVGDEMLDEHCDTDPVWFPEMFKDW

Transcript Sequence

Transcript ID

CAA33972
Transcript Infomation

cdna chromosome:IRGSP-1.0:Pt:67638:68288:-1 gene:CAA33972 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCCATTGGTGTTCCAAAAGTACCTTACCGGATTCCCGGAGATGAAGAAGCGACTTGG
GTTGACTTATACAATGTTATGTATCGAGAAAGGACACTTTTTTTAGGTCAAGAGATTCGT
TGCGAGGTCACGAATCATATTACAGGTCTCATGGTATATCTCAGTATAGAAGATGGAAGT
AGCGATATTTTTTTGTTTATAAACTCCCCCGGCGGTTGGTTAATCTCAGGAATGGCGATT
TTTGATACGATGCAAACGGTAACACCAAATATATATACAACATGCCTAGGAATAGCCGCG
TCCATGCCGTCCTTCATTCTGCTTGGAGGAGAACCCACCAAGCGTATAGCATTCCCCCAC
GCGAGGATTATGCTTCACCAACCTGCTAGTGCTTATTATCGGGCAAGAACACCAGAATTT
TTACTAGAAGTGGAAGAGTTACACAAAGTTCGCGAAATGATCACAAGGGTTTATGCACTA
AGAACAGGCAAGCCTTTTTGGGTTGTATCCGAAGACATGGAAAGGGATGTTTTTATGTCA
GCAGACGAAGCCAAAGCTTATGGACTTGTCGATATTGTAGGGGATGAAATGCTTGACGAG
CACTGCGATACTGATCCAGTGTGGTTTCCAGAAATGTTTAAGGATTGGTAG