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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

CAA33971
CDS Infomation

cds chromosome:IRGSP-1.0:Pt:66355:66714:-1 gene:CAA33971 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rpl20 description:ribosomal protein L20
Sequence

ATGACCAGAGTTCCGCGAGGATATATAGCTCGGAGACGACGGGCAAAAATGCGTTCATTT
GCCTCAAACTTTAGAGGGGCTCATTTAAGACTTAATCGAATGATTACTCAACAGGTAAGA
AGAGCGTTTGTTTCCTCTCATCGAGATAGAGTCAGGCAAAAGAGGGATTTTCGGCGTTTG
TGGATCAGTCGGATAAACGCAGCAACGCGGATACATAAAGTATTCGATAATTATAGTAAA
TTAATACACAATCTTTACAAGAAAGAATTGATTCTTAATCGTAAAATCCTTGCACAAGTA
GCTGTATTAAATTCAAATAATCTTTACACGATTTCCAATAAAATAAAGATTATCAATTAA

Peptide Sequence

PEP ID

CAA33971
PEP Infomation

pep chromosome:IRGSP-1.0:Pt:66355:66714:-1 gene:CAA33971 transcript:CAA33971 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rpl20 description:ribosomal protein L20
Sequence

MTRVPRGYIARRRRAKMRSFASNFRGAHLRLNRMITQQVRRAFVSSHRDRVRQKRDFRRL
WISRINAATRIHKVFDNYSKLIHNLYKKELILNRKILAQVAVLNSNNLYTISNKIKIIN

Transcript Sequence

Transcript ID

CAA33971
Transcript Infomation

cdna chromosome:IRGSP-1.0:Pt:66355:66714:-1 gene:CAA33971 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rpl20 description:ribosomal protein L20
Sequence

ATGACCAGAGTTCCGCGAGGATATATAGCTCGGAGACGACGGGCAAAAATGCGTTCATTT
GCCTCAAACTTTAGAGGGGCTCATTTAAGACTTAATCGAATGATTACTCAACAGGTAAGA
AGAGCGTTTGTTTCCTCTCATCGAGATAGAGTCAGGCAAAAGAGGGATTTTCGGCGTTTG
TGGATCAGTCGGATAAACGCAGCAACGCGGATACATAAAGTATTCGATAATTATAGTAAA
TTAATACACAATCTTTACAAGAAAGAATTGATTCTTAATCGTAAAATCCTTGCACAAGTA
GCTGTATTAAATTCAAATAATCTTTACACGATTTCCAATAAAATAAAGATTATCAATTAA