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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

CAA33970
CDS Infomation

cds chromosome:IRGSP-1.0:Pt:65641:66132:1 gene:CAA33970 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rps18 description:ribosomal protein S18
Sequence

ATGTATACATCTAAACAACCCTTTCATAAATCCAAACAAACTTTTCATAAATCCAAGCAA
ACTTTTCGTAAATCCAAGCAAACTTTTCGTAAATTCAAACAACCTTTTCGCAAACCCAAA
CAACCTTTTCGTAGGCGTCCTCGGATTGGCCCGGGGGATCGAATTGATTATAGAAACATG
AGTTTAATTAATCGATTTATTAGTGAACAAGGAAAAATATTATCGAGACGAATAAATAGA
TTAACCTTGAAACAACAACGATTAATTACTCTTGCTATAAAACAGGCTCGTATTTTATCT
TTCTTACCATTTCGTAACTATGAGAATGAGAAACAATTTCAAGCCCAGTCAATTTCAATA
ATTACAGGTCCTAGACCCAGAAAAAATAGACATATTCCTCCATTAACACAAAAGTTCAAT
TCCAATCGAAACTTAAGAAACTCCAACCAGACTTTAAGAAACACCAATCGGAACTTAAGT
TCCGATTGTTGA

Peptide Sequence

PEP ID

CAA33970
PEP Infomation

pep chromosome:IRGSP-1.0:Pt:65641:66132:1 gene:CAA33970 transcript:CAA33970 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rps18 description:ribosomal protein S18
Sequence

MYTSKQPFHKSKQTFHKSKQTFRKSKQTFRKFKQPFRKPKQPFRRRPRIGPGDRIDYRNM
SLINRFISEQGKILSRRINRLTLKQQRLITLAIKQARILSFLPFRNYENEKQFQAQSISI
ITGPRPRKNRHIPPLTQKFNSNRNLRNSNQTLRNTNRNLSSDC

Transcript Sequence

Transcript ID

CAA33970
Transcript Infomation

cdna chromosome:IRGSP-1.0:Pt:65641:66132:1 gene:CAA33970 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rps18 description:ribosomal protein S18
Sequence

ATGTATACATCTAAACAACCCTTTCATAAATCCAAACAAACTTTTCATAAATCCAAGCAA
ACTTTTCGTAAATCCAAGCAAACTTTTCGTAAATTCAAACAACCTTTTCGCAAACCCAAA
CAACCTTTTCGTAGGCGTCCTCGGATTGGCCCGGGGGATCGAATTGATTATAGAAACATG
AGTTTAATTAATCGATTTATTAGTGAACAAGGAAAAATATTATCGAGACGAATAAATAGA
TTAACCTTGAAACAACAACGATTAATTACTCTTGCTATAAAACAGGCTCGTATTTTATCT
TTCTTACCATTTCGTAACTATGAGAATGAGAAACAATTTCAAGCCCAGTCAATTTCAATA
ATTACAGGTCCTAGACCCAGAAAAAATAGACATATTCCTCCATTAACACAAAAGTTCAAT
TCCAATCGAAACTTAAGAAACTCCAACCAGACTTTAAGAAACACCAATCGGAACTTAAGT
TCCGATTGTTGA