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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

CAA33942
CDS Infomation

cds chromosome:IRGSP-1.0:Pt:87944:88414:-1 gene:CAA33942 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rps7 description:ribosomal protein S7
Sequence

ATGTCACGTCGAGGTACTGCAGAAAAAAGAACTGCAAAATCCGATCCAATTTTTCGTAAT
CGATTAGTTAACATGGTGGTTAACCGTATTATGAAAGACGGAAAAAAATCATTGGCTTAT
CAAATTCTCTATCGAGCCGTGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATTG
GTTTTACGTCAAGCAATACGTAGAGTAACTCCCAATATAGGAGTAAAAACAAGACGTAAT
AAAAAAGGATCGACGCGGAAAGTTCCGATTGAAATAGGATCTAAACAAGGAAGAGCACTT
GCCATTCGTTGGTTATTAGAAGCATCCCAAAAGCGTCCGGGTCGAAATATGGCTTTCAAA
TTAAGTTCCGAATTAGTAGATGCTGCCAAAGGGGGTGGGGGTGCCATACGCAAAAAGGAA
GCGACTCATAGAATGGCAGAGGCAAATAGAGCTCTTGCACATTTTCGTTAA

Peptide Sequence

PEP ID

CAA33942
PEP Infomation

pep chromosome:IRGSP-1.0:Pt:87944:88414:-1 gene:CAA33942 transcript:CAA33942 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rps7 description:ribosomal protein S7
Sequence

MSRRGTAEKRTAKSDPIFRNRLVNMVVNRIMKDGKKSLAYQILYRAVKKIQQKTETNPLL
VLRQAIRRVTPNIGVKTRRNKKGSTRKVPIEIGSKQGRALAIRWLLEASQKRPGRNMAFK
LSSELVDAAKGGGGAIRKKEATHRMAEANRALAHFR

Transcript Sequence

Transcript ID

CAA33942
Transcript Infomation

cdna chromosome:IRGSP-1.0:Pt:87944:88414:-1 gene:CAA33942 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rps7 description:ribosomal protein S7
Sequence

ATGTCACGTCGAGGTACTGCAGAAAAAAGAACTGCAAAATCCGATCCAATTTTTCGTAAT
CGATTAGTTAACATGGTGGTTAACCGTATTATGAAAGACGGAAAAAAATCATTGGCTTAT
CAAATTCTCTATCGAGCCGTGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATTG
GTTTTACGTCAAGCAATACGTAGAGTAACTCCCAATATAGGAGTAAAAACAAGACGTAAT
AAAAAAGGATCGACGCGGAAAGTTCCGATTGAAATAGGATCTAAACAAGGAAGAGCACTT
GCCATTCGTTGGTTATTAGAAGCATCCCAAAAGCGTCCGGGTCGAAATATGGCTTTCAAA
TTAAGTTCCGAATTAGTAGATGCTGCCAAAGGGGGTGGGGGTGCCATACGCAAAAAGGAA
GCGACTCATAGAATGGCAGAGGCAAATAGAGCTCTTGCACATTTTCGTTAA